Domain ID e5my1D1

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Alpha-L RNA-binding motif
  • F: Ribosomal_S4,S4
UID: 002067892
Type: Automatic domain
Parent: e4v4vAD1
Range: D:1-205
PDB: 5my1
PDB Description: 30S ribosomal protein S4
UniProt: P0A7V8
Species:

Structure of domain e5my1D1

Domains in the same chain:

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e5my1D1 D:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif

Domains in the same PDB:

e5my1B1 B:8-225 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5my1C2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5my1C1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5my1D1 D:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5my1E1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5my1E2 E:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5my1F1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5my1G1 G:2-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5my1H2 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5my1H1 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5my1I1 I:3-129 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5my1J1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5my1K1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5my1L1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5my1M1 M:1-114 HhH/H2TH H2TH H2TH
e5my1N1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5my1O1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5my1P1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5my1Q1 Q:3-82 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5my1R1 R:19-73 HTH HTH tri-helical
e5my1S1 S:2-80 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5my1T1 T:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5my1U1 U:3-53 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e5my1V1 V:10-52,V:174-234 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5my1V2 V:53-173 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5my1W1 W:4-52,W:174-232 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5my1W2 W:53-173 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5my1X6 X:3-151,X:452-577 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5my1X2 X:152-225,X:343-451 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5my1X9 X:226-234,X:289-342 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5my1X1 X:235-288 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5my1X5 X:578-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5my1X7 X:713-790 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5my1X4 X:791-827,X:1063-1239 cradle loop barrel RIFT-related double psi
e5my1X8 X:828-938,X:1045-1062 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5my1X10 X:939-983,X:1004-1044 Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e5my1X3 X:1240-1341 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5my1Y1 Y:1-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5my1Y5 Y:334-498 cradle loop barrel RIFT-related double psi
e5my1Y9 Y:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5my1Y8 Y:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5my1Y7 Y:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5my1Y2 Y:895-931,Y:1214-1376 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5my1Y4 Y:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5my1Y6 Y:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5my1Y10 Y:1134-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5my1Z1 Z:5-83 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit