ECOD: domain e5ndgSM1

Domain ID e5ndgSM1

A: extended segments
X: Suppressor protein STM1
H: Suppressor protein STM1
T: Suppressor protein STM1
F: HABP4_PAI-RBP1

UID:	002152115
Type:	Automatic domain
Parent:	e4v6xAh1
Range:	SM:21-168
Ligands:	MG
PDB:	5ndg
PDB Description:	Suppressor protein STM1
UniProt:	P39015
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e5ndgSM1

Domains in the same chain:

Download Pymol

e5ndgSM1	SM:21-168	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1

Domains in the same PDB:

e5ndgc01	c0:1-92	HTH	HTH	winged
e5ndgC01	C0:1-92	HTH	HTH	winged
e5ndgc11	c1:2-147	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgC11	C1:4-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgc21	c2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5ndgC21	C2:24-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5ndgc32	c3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5ndgc31	c3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5ndgC31	C3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5ndgC32	C3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5ndgc41	c4:10-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5ndgC41	C4:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5ndgc51	c5:14-132	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5ndgC51	C5:10-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5ndgc61	c6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5ndgC61	C6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5ndgc71	c7:2-122	HTH	HTH	FF domain
e5ndgC71	C7:2-123	HTH	HTH	FF domain
e5ndgc81	c8:2-66,c8:90-146	HhH/H2TH	H2TH	H2TH
e5ndgC81	C8:2-146	HhH/H2TH	H2TH	H2TH
e5ndgc91	c9:2-144	HTH	HTH	winged
e5ndgC91	C9:2-144	HTH	HTH	winged
e5ndgd01	d0:19-119	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5ndgD01	D0:17-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5ndgd11	d1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5ndgD11	D1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5ndgd22	d2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5ndgd21	d2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5ndgD22	D2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5ndgD21	D2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5ndgd31	d3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgD31	D3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgd41	d4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5ndgD41	D4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5ndgd51	d5:37-105	HTH	HTH	winged
e5ndgD51	D5:36-105	HTH	HTH	winged
e5ndgd61	d6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5ndgD61	D6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5ndgd71	d7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgD71	D7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgd81	d8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgD81	D8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgd91	d9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5ndgD91	D9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5ndge01	e0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5ndgE01	E0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5ndge11	e1:80-91,e1:120-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgE11	E1:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgl21	l2:99-253	SH3	SH3	SH3
e5ndgl22	l2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgL21	L2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgL22	L2:99-253	SH3	SH3	SH3
e5ndgl31	l3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5ndgL31	L3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5ndgl43	l4:2-275	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5ndgl42	l4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5ndgL43	L4:2-275	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5ndgL42	L4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5ndgl51	l5:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5ndgL51	L5:2-295	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5ndgl61	l6:2-176	SH3	SH3	SH3
e5ndgL61	L6:2-109,L6:129-176	SH3	SH3	SH3
e5ndgl71	l7:22-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5ndgL71	L7:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5ndgl81	l8:24-254	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5ndgL81	L8:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5ndgl92	l9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5ndgl91	l9:86-190	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5ndgL91	L9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5ndgL92	L9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5ndgm01	m0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5ndgM01	M0:2-219	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5ndgm11	m1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5ndgM11	M1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5ndgm31	m3:2-195	RPL13	RPL13	RPL13
e5ndgM31	M3:2-194	RPL13	RPL13	RPL13
e5ndgm41	m4:2-138	SH3	SH3	SH3
e5ndgM41	M4:3-138	SH3	SH3	SH3
e5ndgm51	m5:2-175	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5ndgM51	M5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5ndgm61	m6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5ndgM61	M6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5ndgm71	m7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5ndgM71	M7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5ndgm81	m8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5ndgM81	M8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5ndgm92	m9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5ndgm91	m9:57-184	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5ndgM91	M9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5ndgM92	M9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5ndgn02	n0:1-69	GP2-like	RplX-like	RplX-like
e5ndgn01	n0:70-172	GP2-like	RplX-like	RplX-like
e5ndgN01	N0:70-172	GP2-like	RplX-like	RplX-like
e5ndgN02	N0:3-69	GP2-like	RplX-like	RplX-like
e5ndgn11	n1:2-160	SH3	SH3	SH3
e5ndgN11	N1:2-160	SH3	SH3	SH3
e5ndgn21	n2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5ndgN21	N2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5ndgn31	n3:4-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5ndgN31	N3:3-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5ndgn41	n4:1-132	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5ndgN41	N4:1-130	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5ndgn51	n5:23-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5ndgN51	N5:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5ndgn61	n6:2-125	SH3	SH3	SH3
e5ndgN61	N6:2-127	SH3	SH3	SH3
e5ndgn71	n7:2-136	SH3	SH3	SH3
e5ndgN71	N7:2-136	SH3	SH3	SH3
e5ndgn81	n8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5ndgN81	N8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5ndgn91	n9:2-59	RPL29	RPL29	RPL29
e5ndgN91	N9:2-59	RPL29	RPL29	RPL29
e5ndgo01	o0:6-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5ndgO01	O0:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5ndgo11	o1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5ndgO11	O1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5ndgo21	o2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5ndgO21	O2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5ndgo31	o3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5ndgO31	O3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5ndgo41	o4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5ndgO41	O4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5ndgo51	o5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5ndgO51	O5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5ndgo61	o6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5ndgO61	O6:2-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5ndgo71	o7:2-83	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgO71	O7:2-85	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgo81	o8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5ndgO81	O8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5ndgo91	o9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5ndgO91	O9:3-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5ndgp01	p0:3-107,p0:184-216	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e5ndgq01	q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgQ01	Q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgq11	q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5ndgQ11	Q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5ndgq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgq31	q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgQ31	Q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5ndgs01	s0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5ndgS01	S0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5ndgs12	s1:114-235	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5ndgs11	s1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5ndgS11	S1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5ndgS12	S1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5ndgs22	s2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5ndgs21	s2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5ndgs23	s2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5ndgS22	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5ndgS21	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5ndgS23	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5ndgs31	s3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5ndgs32	s3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5ndgS31	S3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5ndgS32	S3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5ndgs42	s4:176-261	SH3	SH3	SH3
e5ndgs41	s4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5ndgs43	s4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgS41	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5ndgS42	S4:176-261	SH3	SH3	SH3
e5ndgS43	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5ndgs51	s5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5ndgS51	S5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5ndgs61	s6:1-218	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5ndgS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5ndgs71	s7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5ndgs72	s7:3-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5ndgS72	S7:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5ndgS71	S7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5ndgs81	s8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5ndgS81	S8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5ndgs91	s9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5ndgS91	S9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5ndgsM1	sM:23-137	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5ndgSM1	SM:21-168	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5ndgsR1	sR:7-319	beta-propeller-like	beta-propeller	7-bladed
e5ndgSR1	SR:2-319	beta-propeller-like	beta-propeller	7-bladed