Domain ID e5ndk211

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 002140989
Type: Automatic domain
Parent: e1vqoB1
Range: 21:1-205
Ligands: MG
PDB: 5ndk
PDB Description: 50S ribosomal protein L3
UniProt: Q5SHN8
Hsap BLAST neighbor: P09001
Species:

Structure of domain e5ndk211

Domains in the same chain:

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e5ndk211 21:1-205 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e5ndk112 11:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndk111 11:127-274 SH3 SH3 SH3
e5ndk121 12:4-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ndk151 15:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ndk192 19:127-274 SH3 SH3 SH3
e5ndk191 19:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndk1A1 1A:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ndk1E1 1E:4-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ndk1I1 1I:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ndk211 21:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e5ndk221 22:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ndk222 22:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ndk251 25:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndk291 29:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e5ndk2A1 2A:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndk2E1 2E:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ndk2E2 2E:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ndk2I1 2I:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndk311 31:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ndk321 32:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndk351 35:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndk391 39:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ndk3A1 3A:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndk3E1 3E:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndk3I1 3I:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndk411 41:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ndk421 42:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ndk422 42:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndk451 45:2-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ndk491 49:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ndk4A1 4A:2-117 HhH/H2TH H2TH H2TH
e5ndk4E1 4E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ndk4E2 4E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndk4I1 4I:2-117 HhH/H2TH H2TH H2TH
e5ndk511 51:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndk512 51:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndk521 52:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5ndk551 55:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5ndk581 58:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ndk592 59:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndk591 59:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndk5A1 5A:4-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndk5E1 5E:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5ndk5I1 5I:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndk611 61:56-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5ndk612 61:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5ndk621 62:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ndk651 65:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndk681 68:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndk691 69:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5ndk692 69:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5ndk6A1 6A:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ndk6E1 6E:2-153 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ndk6I1 6I:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ndk722 72:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ndk721 72:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ndk751 75:1-137 SH3 SH3 SH3
e5ndk781 78:1-147 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndk7A1 7A:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5ndk7E1 7E:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ndk7E2 7E:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ndk7I1 7I:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5ndk821 82:2-125 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndk851 85:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5ndk881 88:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ndk8A1 8A:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndk8E1 8E:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndk8I1 8I:2-101 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndk951 95:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5ndk981 98:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5ndk9A1 9A:20-88 HTH HTH tri-helical
e5ndk9I1 9I:21-87 HTH HTH tri-helical
e5ndkA51 A5:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ndkA81 A8:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndkAA1 AA:7-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ndkAI1 AI:4-83 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ndkB51 B5:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndkB81 B8:1-129 SH3 SH3 SH3
e5ndkBA1 BA:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5ndkBI1 BI:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5ndkC51 C5:2-105 SH3 SH3 SH3
e5ndkC81 C8:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5ndkD52 D5:93-169 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5ndkD51 D5:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ndkD81 D8:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5ndkE51 E5:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5ndkE81 E8:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ndkF51 F5:2-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5ndkF81 F8:1-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndkG51 G5:4-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ndkG81 G8:3-105 SH3 SH3 SH3
e5ndkH51 H5:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ndkH82 H8:1-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ndkH81 H8:94-171 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5ndkI51 I5:1-63 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5ndkI81 I8:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5ndkJ51 J5:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndkJ81 J8:2-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5ndkK81 K8:2-69 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ndkL51 L5:1-47 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5ndkL81 L8:2-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ndkM51 M5:2-63 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5ndkM81 M8:1-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5ndkN81 N8:3-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndkP81 P8:1-47 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5ndkQ81 Q8:2-61 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p