ECOD: domain e5obmS23

Domain ID e5obmS23

A: extended segments
X: N-terminal region in 40S ribosomal protein rpS2 (S5p)
H: N-terminal region in 40S ribosomal protein rpS2 (S5p)
T: N-terminal region in 40S ribosomal protein rpS2 (S5p)
F: Ribosomal_S5

UID:	002531840
Type:	Automatic domain
Parent:	e4v6iAE1
Range:	S2:34-108
Ligands:	MG
PDB:	5obm
PDB Description:	40S ribosomal protein S2
UniProt:	P25443
Species:

Domain
In chain context
In PDB context

Structure of domain e5obmS23

Domains in the same chain:

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e5obmS23	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5obmS21	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5obmS22	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e5obmc01	c0:1-98	HTH	HTH	winged
e5obmC01	C0:1-96	HTH	HTH	winged
e5obmc11	c1:6-147	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmC11	C1:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmc21	c2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5obmC21	C2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5obmc32	c3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5obmc31	c3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5obmC31	C3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5obmC32	C3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5obmc41	c4:10-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5obmC41	C4:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5obmc51	c5:4-138	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5obmC51	C5:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5obmc61	c6:2-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5obmC61	C6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5obmc71	c7:2-122	HTH	HTH	FF domain
e5obmC71	C7:2-126	HTH	HTH	FF domain
e5obmc81	c8:2-66,c8:90-146	HhH/H2TH	H2TH	H2TH
e5obmC81	C8:2-66,C8:90-146	HhH/H2TH	H2TH	H2TH
e5obmc91	c9:2-144	HTH	HTH	winged
e5obmC91	C9:2-144	HTH	HTH	winged
e5obmd01	d0:12-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5obmD01	D0:15-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5obmd11	d1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5obmD11	D1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5obmd22	d2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5obmd21	d2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5obmD22	D2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5obmD21	D2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5obmd31	d3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmD31	D3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmd41	d4:2-134	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5obmD41	D4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5obmd51	d5:37-105	HTH	HTH	winged
e5obmD51	D5:36-105	HTH	HTH	winged
e5obmd61	d6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5obmD61	D6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5obmd71	d7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmD71	D7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmd81	d8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmD81	D8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmd91	d9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5obmD91	D9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5obme01	e0:2-63	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5obmE01	E0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5obme11	e1:81-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmE11	E1:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obml21	l2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obml22	l2:99-253	SH3	SH3	SH3
e5obmL22	L2:99-253	SH3	SH3	SH3
e5obmL21	L2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obml31	l3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5obmL31	L3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5obml42	l4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5obml43	l4:2-275	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5obmL43	L4:2-275	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5obmL42	L4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5obml51	l5:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5obmL51	L5:2-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5obml61	l6:2-176	SH3	SH3	SH3
e5obmL61	L6:2-109,L6:129-176	SH3	SH3	SH3
e5obml71	l7:22-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5obmL71	L7:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5obml81	l8:24-254	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5obmL81	L8:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5obml92	l9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5obml91	l9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5obmL92	L9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5obmL91	L9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5obmm01	m0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5obmM01	M0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5obmm11	m1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5obmM11	M1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5obmm31	m3:2-195	RPL13	RPL13	RPL13
e5obmM31	M3:2-194	RPL13	RPL13	RPL13
e5obmm41	m4:2-138	SH3	SH3	SH3
e5obmM41	M4:3-138	SH3	SH3	SH3
e5obmm51	m5:2-175	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5obmM51	M5:2-175	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5obmm61	m6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5obmM61	M6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5obmm71	m7:2-156	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5obmM71	M7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5obmm81	m8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5obmM81	M8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5obmm92	m9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5obmm91	m9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5obmM91	M9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5obmM92	M9:57-183	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5obmn01	n0:70-172	GP2-like	RplX-like	RplX-like
e5obmn02	n0:1-69	GP2-like	RplX-like	RplX-like
e5obmN02	N0:1-69	GP2-like	RplX-like	RplX-like
e5obmN01	N0:70-172	GP2-like	RplX-like	RplX-like
e5obmn11	n1:2-160	SH3	SH3	SH3
e5obmN11	N1:2-160	SH3	SH3	SH3
e5obmn21	n2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5obmN21	N2:9-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5obmn31	n3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5obmN31	N3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5obmn41	n4:1-135	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5obmN41	N4:1-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5obmn51	n5:23-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5obmN51	N5:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5obmn61	n6:2-127	SH3	SH3	SH3
e5obmN61	N6:2-127	SH3	SH3	SH3
e5obmn71	n7:2-136	SH3	SH3	SH3
e5obmN71	N7:2-136	SH3	SH3	SH3
e5obmn81	n8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5obmN81	N8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5obmn91	n9:2-59	RPL29	RPL29	RPL29
e5obmN91	N9:2-59	RPL29	RPL29	RPL29
e5obmo01	o0:6-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5obmO01	O0:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5obmo11	o1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5obmO11	O1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5obmo21	o2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5obmO21	O2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5obmo31	o3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5obmO31	O3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5obmo41	o4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5obmO41	O4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5obmo51	o5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5obmO51	O5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5obmo61	o6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5obmO61	O6:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5obmo71	o7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmO71	O7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmo81	o8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5obmO81	O8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5obmo91	o9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5obmO91	O9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5obmp01	p0:3-107,p0:184-221	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e5obmq01	q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmQ01	Q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmq11	q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5obmQ11	Q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5obmq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmq31	q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obmQ31	Q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5obms01	s0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5obmS01	S0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5obms12	s1:114-235	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5obms11	s1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5obmS12	S1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5obmS11	S1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5obms21	s2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5obms22	s2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5obms23	s2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5obmS21	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5obmS23	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5obmS22	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5obms31	s3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5obms32	s3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5obmS31	S3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5obmS32	S3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5obms41	s4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5obms43	s4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obms42	s4:176-261	SH3	SH3	SH3
e5obmS41	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5obmS43	S4:176-261	SH3	SH3	SH3
e5obmS42	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5obms51	s5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5obmS51	S5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5obms61	s6:1-218	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5obmS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5obms71	s7:2-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5obms72	s7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5obmS72	S7:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5obmS71	S7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5obms81	s8:2-198	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5obmS81	S8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5obms91	s9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5obmS91	S9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5obmsM1	sM:23-135,sM:155-174	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5obmSM1	SM:9-176	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5obmsR1	sR:2-319	beta-propeller-like	beta-propeller	7-bladed
e5obmSR1	SR:2-319	beta-propeller-like	beta-propeller	7-bladed