Domain ID e5obme11

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_S27
UID: 002152921
Type: Automatic domain
Parent: e3j43Y1
Range: e1:81-152
Ligands: ZN
PDB: 5obm
PDB Description: Ubiquitin-40S ribosomal protein S31
UniProt: P05759
Hsap BLAST neighbor: P62979
Species:

Structure of domain e5obme11

Domains in the same chain:

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e5obme11 e1:81-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e5obmc01 c0:1-98 HTH HTH winged
e5obmC01 C0:1-96 HTH HTH winged
e5obmc11 c1:6-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmC11 C1:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmc21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5obmC21 C2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5obmc32 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5obmc31 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5obmC31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5obmC32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5obmc41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5obmC41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5obmc51 c5:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5obmC51 C5:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5obmc61 c6:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5obmC61 C6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5obmc71 c7:2-122 HTH HTH FF domain
e5obmC71 C7:2-126 HTH HTH FF domain
e5obmc81 c8:2-66,c8:90-146 HhH/H2TH H2TH H2TH
e5obmC81 C8:2-66,C8:90-146 HhH/H2TH H2TH H2TH
e5obmc91 c9:2-144 HTH HTH winged
e5obmC91 C9:2-144 HTH HTH winged
e5obmd01 d0:12-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5obmD01 D0:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5obmd11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5obmD11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5obmd22 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5obmd21 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5obmD22 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5obmD21 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5obmd31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmD31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmd41 d4:2-134 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5obmD41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5obmd51 d5:37-105 HTH HTH winged
e5obmD51 D5:36-105 HTH HTH winged
e5obmd61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5obmD61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5obmd71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmD71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmd81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmd91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5obmD91 D9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5obme01 e0:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5obmE01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5obme11 e1:81-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmE11 E1:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obml21 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obml22 l2:99-253 SH3 SH3 SH3
e5obmL22 L2:99-253 SH3 SH3 SH3
e5obmL21 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obml31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5obmL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5obml42 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5obml43 l4:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5obmL43 L4:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5obmL42 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5obml51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5obmL51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5obml61 l6:2-176 SH3 SH3 SH3
e5obmL61 L6:2-109,L6:129-176 SH3 SH3 SH3
e5obml71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5obmL71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5obml81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e5obmL81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e5obml92 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5obml91 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5obmL92 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5obmL91 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5obmm01 m0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5obmM01 M0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5obmm11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5obmM11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5obmm31 m3:2-195 RPL13 RPL13 RPL13
e5obmM31 M3:2-194 RPL13 RPL13 RPL13
e5obmm41 m4:2-138 SH3 SH3 SH3
e5obmM41 M4:3-138 SH3 SH3 SH3
e5obmm51 m5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5obmM51 M5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5obmm61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5obmM61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5obmm71 m7:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5obmM71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5obmm81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5obmM81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5obmm92 m9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5obmm91 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5obmM91 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5obmM92 M9:57-183 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5obmn01 n0:70-172 GP2-like RplX-like RplX-like
e5obmn02 n0:1-69 GP2-like RplX-like RplX-like
e5obmN02 N0:1-69 GP2-like RplX-like RplX-like
e5obmN01 N0:70-172 GP2-like RplX-like RplX-like
e5obmn11 n1:2-160 SH3 SH3 SH3
e5obmN11 N1:2-160 SH3 SH3 SH3
e5obmn21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5obmN21 N2:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5obmn31 n3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5obmN31 N3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5obmn41 n4:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5obmN41 N4:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5obmn51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5obmN51 N5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5obmn61 n6:2-127 SH3 SH3 SH3
e5obmN61 N6:2-127 SH3 SH3 SH3
e5obmn71 n7:2-136 SH3 SH3 SH3
e5obmN71 N7:2-136 SH3 SH3 SH3
e5obmn81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5obmN81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5obmn91 n9:2-59 RPL29 RPL29 RPL29
e5obmN91 N9:2-59 RPL29 RPL29 RPL29
e5obmo01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5obmO01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5obmo11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5obmO11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5obmo21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5obmO21 O2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5obmo31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5obmO31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5obmo41 o4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5obmO41 O4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5obmo51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5obmO51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5obmo61 o6:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5obmO61 O6:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5obmo71 o7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmO71 O7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmo81 o8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5obmO81 O8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5obmo91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5obmO91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5obmp01 p0:3-107,p0:184-221 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e5obmq01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmQ01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmq11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5obmQ11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5obmq21 q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmQ21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmq31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obmQ31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5obms01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5obmS01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5obms12 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5obms11 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5obmS12 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5obmS11 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5obms21 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5obms22 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5obms23 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5obmS21 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5obmS23 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5obmS22 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5obms31 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5obms32 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5obmS31 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5obmS32 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5obms41 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5obms43 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obms42 s4:176-261 SH3 SH3 SH3
e5obmS41 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5obmS43 S4:176-261 SH3 SH3 SH3
e5obmS42 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5obms51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5obmS51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5obms61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5obmS61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5obms71 s7:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5obms72 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5obmS72 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5obmS71 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5obms81 s8:2-198 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5obmS81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5obms91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5obmS91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5obmsM1 sM:23-135,sM:155-174 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5obmSM1 SM:9-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5obmsR1 sR:2-319 beta-propeller-like beta-propeller 7-bladed
e5obmSR1 SR:2-319 beta-propeller-like beta-propeller 7-bladed