Domain ID e5optd1

Download files:
  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 002137344
Type: Automatic domain
Parent: e4v6iAE3
Range: d:183-259
PDB: 5opt
PDB Description: 40S ribosomal protein S2, putative
UniProt: Q4DIZ9
Hsap BLAST neighbor: P15880
Species:

Structure of domain e5optd1

Domains in the same chain:

Download Pymol

e5optd2 d:37-115 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5optd3 d:116-182 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5optd1 d:183-259 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e5opta1 a:41-110 HTH HTH winged
e5optb1 b:1-164 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5optc1 c:7-66 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5optd2 d:37-115 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5optd3 d:116-182 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5optd1 d:183-259 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5opte2 e:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5opte1 e:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5optf1 f:4-210 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5optg1 g:4-86 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5opth1 h:68-140 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5opth2 h:141-220 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5opth3 h:221-240 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5opti1 i:21-141 Bacillus chorismate mutase-like L30e-like L30e-like
e5optj1 j:86-149 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5optk1 k:58-175 HTH HTH FF domain
e5optl1 l:15-113 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5optL2 L:2-113 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5optL1 L:114-172 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5optL3 L:173-259 SH3 SH3 SH3
e5optm2 m:6-90 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5optm1 m:91-205 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5optM1 M:2-143 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5optn1 n:7-99 HTH HTH winged
e5opto1 o:12-151 HTH HTH winged
e5optO1 O:1-190 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5optp1 p:5-314 beta-propeller-like beta-propeller 7-bladed
e5optP1 P:1-249 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5optq1 q:20-57 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5optQ2 Q:3-110 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5optQ1 Q:102-202 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5optr1 r:10-149 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5optR1 R:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5optR2 R:83-142 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5optS1 S:5-86 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5optt1 t:16-134 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5optT1 T:1-104 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5optu1 u:8-78,u:99-127 HhH/H2TH H2TH H2TH
e5optU1 U:45-112 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5optV1 V:9-143 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5optW2 W:22-115 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5optW1 W:116-238 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5optX1 X:11-158 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5optY1 Y:4-126 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5optZ1 Z:2-116,Z:157-216 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related