Domain ID e5uhgF2

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Sigma70_r3,Sigma70_r4
UID: 002061385
Type: Automatic domain
Parent: e3wodF2
Range: F:392-394,F:421-528
Ligands: RFP
PDB: 5uhg
PDB Description: RNA polymerase sigma factor SigA
UniProt: P9WGI1
Species:

Structure of domain e5uhgF2

Domains in the same chain:

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e5uhgF3 F:207-363 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e5uhgF1 F:364-420 HTH HTH tri-helical
e5uhgF2 F:392-394,F:421-528 HTH HTH tri-helical

Domains in the same PDB:

e5uhgA1 A:3-47,A:170-226 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5uhgA2 A:48-169 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5uhgB1 B:6-47,B:170-232 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5uhgB2 B:48-169 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5uhgC4 C:28-181,C:377-502 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5uhgC3 C:182-376 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5uhgC6 C:503-638 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5uhgC7 C:639-709 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5uhgC5 C:710-747,C:880-1035 cradle loop barrel RIFT-related double psi
e5uhgC1 C:748-879 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5uhgC2 C:1036-1153 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5uhgD3 D:3-147,D:250-421 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5uhgD7 D:148-208 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5uhgD8 D:209-249 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5uhgD2 D:409-452,D:493-573 cradle loop barrel RIFT-related double psi
e5uhgD1 D:453-492 inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e5uhgD10 D:574-730 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5uhgD9 D:731-888 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5uhgD5 D:889-974 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5uhgD4 D:975-1023,D:1099-1281 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5uhgE1 E:28-108 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e5uhgF3 F:207-363 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e5uhgF1 F:364-420 HTH HTH tri-helical
e5uhgF2 F:392-394,F:421-528 HTH HTH tri-helical