Domain ID e5vppRE1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 002406269
Type: Automatic domain
Parent: e1vqoB1
Range: RE:1-205
Ligands: MG
PDB: 5vpp
PDB Description: 50S ribosomal protein L3
UniProt: Q5SHN8
Hsap BLAST neighbor: P09001
Species:

Structure of domain e5vppRE1

Domains in the same chain:

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e5vppRE1 RE:1-205 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e5vppQB1 QB:7-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5vppQC2 QC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5vppQC1 QC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5vppQD1 QD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5vppQE1 QE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5vppQE2 QE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5vppQF1 QF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5vppQG1 QG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5vppQH2 QH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5vppQH1 QH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5vppQI1 QI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5vppQJ1 QJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5vppQK1 QK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vppQL1 QL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vppQM1 QM:2-115 HhH/H2TH H2TH H2TH
e5vppQN1 QN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5vppQO1 QO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5vppQP1 QP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5vppQQ1 QQ:2-101 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vppQR1 QR:19-88 HTH HTH tri-helical
e5vppQS1 QS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5vppQT1 QT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5vppR01 R0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5vppR11 R1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5vppR21 R2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5vppR31 R3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5vppR41 R4:2-35 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5vppR51 R5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5vppR61 R6:5-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5vppR71 R7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5vppR81 R8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5vppR91 R9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5vppRD1 RD:127-273 SH3 SH3 SH3
e5vppRD2 RD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vppRE1 RE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e5vppRF1 RF:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5vppRG1 RG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5vppRH1 RH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5vppRH2 RH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5vppRI1 RI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5vppRI2 RI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5vppRN1 RN:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5vppRO1 RO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5vppRP1 RP:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5vppRQ1 RQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5vppRR1 RR:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5vppRS1 RS:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vppRT1 RT:1-137 SH3 SH3 SH3
e5vppRU1 RU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5vppRV1 RV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5vppRW1 RW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5vppRX1 RX:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5vppRY1 RY:2-103 SH3 SH3 SH3
e5vppRZ2 RZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5vppRZ1 RZ:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5vppXB1 XB:7-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5vppXC2 XC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5vppXC1 XC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5vppXD1 XD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5vppXE2 XE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5vppXE1 XE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5vppXF1 XF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5vppXG1 XG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5vppXH1 XH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5vppXH2 XH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5vppXI1 XI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5vppXJ1 XJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5vppXK1 XK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vppXL1 XL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vppXM1 XM:2-115 HhH/H2TH H2TH H2TH
e5vppXN1 XN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5vppXO1 XO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5vppXP1 XP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5vppXQ1 XQ:2-101 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vppXR1 XR:19-88 HTH HTH tri-helical
e5vppXS1 XS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5vppXT1 XT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5vppY01 Y0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5vppY11 Y1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5vppY21 Y2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5vppY31 Y3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5vppY41 Y4:1-46 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5vppY51 Y5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5vppY61 Y6:5-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5vppY71 Y7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5vppY81 Y8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5vppY91 Y9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5vppYD2 YD:127-273 SH3 SH3 SH3
e5vppYD1 YD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vppYE1 YE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e5vppYF1 YF:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5vppYG1 YG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5vppYH1 YH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5vppYH2 YH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5vppYI1 YI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5vppYI2 YI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5vppYN1 YN:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5vppYO1 YO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5vppYP1 YP:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5vppYQ1 YQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5vppYR1 YR:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5vppYS1 YS:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vppYT1 YT:1-137 SH3 SH3 SH3
e5vppYU1 YU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5vppYV1 YV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5vppYW1 YW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5vppYX1 YX:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5vppYY1 YY:2-103 SH3 SH3 SH3
e5vppYZ1 YZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5vppYZ2 YZ:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related