Domain ID e6b4vIB1

Download files:
  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosomal_L2
UID: 002157757
Type: Automatic domain
Parent: e1rl2A1
Range: IB:2-126
Ligands: MG
PDB: 6b4v
PDB Description: 50S ribosomal protein L2
UniProt: Q72I07
Hsap BLAST neighbor: Q5T653
Species:

Structure of domain e6b4vIB1

Domains in the same chain:

Download Pymol

e6b4vIB1 IB:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vIB2 IB:127-276 SH3 SH3 SH3

Domains in the same PDB:

e6b4vAA1 AA:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6b4vAB1 AB:19-88 HTH HTH tri-helical
e6b4vAC2 AC:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6b4vAC1 AC:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e6b4vAD1 AD:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6b4vBA1 BA:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6b4vBB1 BB:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6b4vBC1 BC:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6b4vBD1 BD:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6b4vCA1 CA:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6b4vCB1 CB:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6b4vCC1 CC:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6b4vCD1 CD:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6b4vDA1 DA:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6b4vDC1 DC:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6b4vDD1 DD:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vE1 E:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vE2 E:127-276 SH3 SH3 SH3
e6b4vEA1 EA:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6b4vEC1 EC:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6b4vED1 ED:19-88 HTH HTH tri-helical
e6b4vF1 F:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e6b4vFA1 FA:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6b4vFC1 FC:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6b4vFD1 FD:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6b4vG1 G:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6b4vGA1 GA:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6b4vGC1 GC:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6b4vGD1 GD:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6b4vH1 H:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6b4vHC1 HC:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6b4vI2 I:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6b4vI1 I:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6b4vIB1 IB:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vIB2 IB:127-276 SH3 SH3 SH3
e6b4vIC1 IC:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6b4vJ1 J:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6b4vJ2 J:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6b4vJA2 JA:101-210 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e6b4vJA3 JA:291-358 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6b4vJA1 JA:211-290 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6b4vJB1 JB:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e6b4vJC1 JC:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6b4vK1 K:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6b4vKA1 KA:7-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6b4vKB1 KB:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6b4vKC1 KC:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6b4vL1 L:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6b4vLA1 LA:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6b4vLA2 LA:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6b4vLB1 LB:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6b4vM1 M:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6b4vMA1 MA:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6b4vMB2 MB:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6b4vMB1 MB:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6b4vN1 N:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6b4vNA1 NA:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6b4vNA2 NA:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6b4vNB2 NB:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6b4vNB1 NB:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6b4vNC3 NC:101-210 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e6b4vNC2 NC:211-290 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6b4vNC1 NC:291-358 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6b4vO1 O:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6b4vOA1 OA:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6b4vOB1 OB:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6b4vOC1 OC:7-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6b4vP1 P:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6b4vPA1 PA:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6b4vPB1 PB:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6b4vPC2 PC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6b4vPC1 PC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6b4vQ1 Q:1-137 SH3 SH3 SH3
e6b4vQA2 QA:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6b4vQA1 QA:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6b4vQB1 QB:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6b4vQC1 QC:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6b4vR1 R:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6b4vRA1 RA:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6b4vRB1 RB:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6b4vRC1 RC:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6b4vRC2 RC:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6b4vS1 S:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6b4vSA1 SA:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6b4vSB1 SB:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6b4vSC1 SC:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6b4vT1 T:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6b4vTA1 TA:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6b4vTB1 TB:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6b4vTC1 TC:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6b4vU1 U:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6b4vUA1 UA:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vUB1 UB:1-137 SH3 SH3 SH3
e6b4vUC1 UC:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6b4vUC2 UC:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6b4vV1 V:1-107 SH3 SH3 SH3
e6b4vVA1 VA:2-118 HhH/H2TH H2TH H2TH
e6b4vVB1 VB:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6b4vVC1 VC:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6b4vW2 W:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6b4vW1 W:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e6b4vWA1 WA:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6b4vWB1 WB:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6b4vWC1 WC:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6b4vX1 X:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6b4vXA1 XA:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6b4vXB1 XB:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6b4vXC1 XC:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6b4vY1 Y:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6b4vYA1 YA:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6b4vYB1 YB:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6b4vYC1 YC:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vZ1 Z:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6b4vZA1 ZA:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6b4vZB1 ZB:1-107 SH3 SH3 SH3
e6b4vZC1 ZC:2-118 HhH/H2TH H2TH H2TH