Domain ID e6bokHD2

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  • A: a+b two layers
  • X: dsRBD-like
  • H: Peptidyl-tRNA hydrolase domain-like
  • T: Peptidyl-tRNA hydrolase domain-like
  • F: Unmapped domains
UID: 002331419
Type: Automatic domain
Parent: e1rq0A4
Range: HD:291-358
Ligands: MG
PDB: 6bok
PDB Description: Peptide chain release factor 1
UniProt: B7MKB3
Hsap BLAST neighbor: Q9UGC7
Species: Escherichia coli

Structure of domain e6bokHD2

Domains in the same chain:

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e6bokHD2 HD:291-358 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6bokHD1 HD:101-210 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e6bokHD3 HD:211-290 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Domains in the same PDB:

e6bokAA1 AA:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6bokAB1 AB:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6bokAC1 AC:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6bokAD1 AD:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6bokBA1 BA:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6bokBB1 BB:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6bokBC1 BC:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6bokBD1 BD:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6bokCA1 CA:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6bokCC1 CC:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6bokCD1 CD:19-88 HTH HTH tri-helical
e6bokDA1 DA:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6bokDC1 DC:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e6bokDD1 DD:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e6bokE1 E:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6bokE2 E:127-276 SH3 SH3 SH3
e6bokEA1 EA:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6bokEC1 EC:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6bokED1 ED:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e6bokF1 F:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e6bokFA1 FA:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6bokFC1 FC:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6bokG1 G:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6bokGA1 GA:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6bokGC1 GC:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6bokGD1 GD:211-290 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6bokGD2 GD:291-358 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6bokGD3 GD:101-210 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e6bokH1 H:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6bokHB1 HB:127-276 SH3 SH3 SH3
e6bokHB2 HB:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6bokHC1 HC:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6bokHD3 HD:211-290 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6bokHD1 HD:101-210 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e6bokHD2 HD:291-358 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6bokI1 I:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6bokI2 I:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6bokIB1 IB:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e6bokIC1 IC:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6bokJ2 J:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6bokJ1 J:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6bokJA1 JA:7-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6bokJB1 JB:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6bokJC1 JC:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6bokK1 K:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6bokKA2 KA:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6bokKA1 KA:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6bokKB1 KB:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e6bokL1 L:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6bokLA1 LA:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6bokLB1 LB:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6bokLB2 LB:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e6bokM1 M:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6bokMA2 MA:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6bokMA1 MA:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6bokMB1 MB:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e6bokMB2 MB:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6bokMC1 MC:7-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6bokN1 N:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6bokNA1 NA:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6bokNB1 NB:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6bokNC2 NC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e6bokNC1 NC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6bokO1 O:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6bokOA1 OA:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6bokOB1 OB:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6bokOC1 OC:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6bokP1 P:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6bokPA1 PA:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6bokPA2 PA:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6bokPB1 PB:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6bokPC1 PC:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6bokPC2 PC:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6bokQ1 Q:1-137 SH3 SH3 SH3
e6bokQA1 QA:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6bokQB1 QB:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6bokQC1 QC:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6bokR1 R:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6bokRA1 RA:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6bokRB1 RB:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6bokRC1 RC:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6bokS1 S:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6bokSA1 SA:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6bokSB1 SB:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6bokSC1 SC:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6bokSC2 SC:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6bokT1 T:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6bokTA1 TA:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6bokTB1 TB:1-137 SH3 SH3 SH3
e6bokTC1 TC:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6bokU1 U:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6bokUA1 UA:2-118 HhH/H2TH H2TH H2TH
e6bokUB1 UB:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6bokUC1 UC:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6bokV1 V:1-107 SH3 SH3 SH3
e6bokVA1 VA:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6bokVB1 VB:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6bokVC1 VC:11-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6bokW1 W:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6bokW2 W:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e6bokWA1 WA:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6bokWB1 WB:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6bokWC1 WC:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6bokX1 X:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6bokXA1 XA:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6bokXB1 XB:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6bokXC1 XC:2-118 HhH/H2TH H2TH H2TH
e6bokY1 Y:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6bokYA1 YA:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6bokYB1 YB:1-107 SH3 SH3 SH3
e6bokYC1 YC:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6bokZ1 Z:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6bokZA1 ZA:19-88 HTH HTH tri-helical
e6bokZB1 ZB:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6bokZB2 ZB:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e6bokZC1 ZC:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain