Domain ID e6cceF1

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Sigma70_r3,Sigma70_r4
UID: 002396899
Type: Automatic domain
Parent: e3wodF2
Range: F:330-332,F:359-466
Ligands: GLU KNG
PDB: 6cce
PDB Description: RNA polymerase sigma factor SigA
UniProt: A0QW02
Species:

Structure of domain e6cceF1

Domains in the same chain:

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e6cceF3 F:163-301 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e6cceF2 F:302-358 HTH HTH tri-helical
e6cceF1 F:330-332,F:359-466 HTH HTH tri-helical

Domains in the same PDB:

e6cceA2 A:1-47,A:170-221 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cceA1 A:48-169 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6cceB1 B:2-47,B:170-232 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6cceB2 B:48-169 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6cceC5 C:21-172,C:368-493 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6cceC2 C:173-367 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6cceC3 C:494-629 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6cceC4 C:630-700 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6cceC7 C:701-738,C:871-1026 cradle loop barrel RIFT-related double psi
e6cceC1 C:739-870 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6cceC6 C:1027-1139 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6cceD1 D:3-55,D:86-147,D:230-408 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6cceD2 D:409-452,D:493-573 cradle loop barrel RIFT-related double psi
e6cceD6 D:453-492 inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e6cceD4 D:574-729 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6cceD8 D:730-887 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6cceD7 D:888-973 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6cceD5 D:974-1042,D:1118-1283 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6cceD3 D:1043-1117 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6cceE1 E:24-106 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e6cceF3 F:163-301 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e6cceF2 F:302-358 HTH HTH tri-helical
e6cceF1 F:330-332,F:359-466 HTH HTH tri-helical