ECOD: domain e6eu0F1

Domain ID e6eu0F1

A: alpha arrays
X: RPB6/omega subunit-like
H: RPB6/omega subunit-like
T: RPB6
F: RNA_pol_Rpb6

UID:	002142183
Type:	Automatic domain
Parent:	e1qklA1
Range:	F:71-153
PDB:	6eu0
PDB Description:	DNA-directed RNA polymerases I, II, and III subunit RPABC2
UniProt:	P20435
Hsap BLAST neighbor:	P61218
Species:

Domains in the same chain:

Download Pymol

e6eu0F1	F:71-153	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6

Domains in the same PDB:

e6eu0A8	A:1-358	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6eu0A9	A:359-402,A:466-551	cradle loop barrel	RIFT-related	double psi
e6eu0A2	A:403-465	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6eu0A3	A:552-710	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6eu0A6	A:711-919	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6eu0A1	A:920-1084	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e6eu0A5	A:1085-1136,A:1318-1460	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6eu0A7	A:1137-1164,A:1272-1317	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu0A4	A:1165-1233,A:1255-1271	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu0B5	B:38-200,B:376-516	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu0B3	B:201-375	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6eu0B1	B:517-605	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6eu0B2	B:606-745	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6eu0B4	B:746-782,B:907-1029	cradle loop barrel	RIFT-related	double psi
e6eu0B7	B:783-906	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6eu0B6	B:1030-1149	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu0C2	C:1-75,C:222-335	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6eu0C1	C:76-221	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6eu0D1	D:1-71,D:98-160	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6eu0E2	E:1-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e6eu0E1	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e6eu0F1	F:71-153	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e6eu0G1	G:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e6eu0G2	G:79-212	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6eu0H1	H:1-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6eu0I1	I:1-41	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6eu0J1	J:1-67	HTH	RPB10	RPB10
e6eu0K1	K:41-142	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6eu0L1	L:26-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6eu0M1	M:71-196,M:225-267	triple barrel	triple barrel	Rap30/74 interaction domains-like
e6eu0N1	N:274-314,N:359-422	triple barrel	triple barrel	Rap30/74 interaction domains-like
e6eu0O5	O:31-129	HTH	HTH	winged
e6eu0O3	O:130-282	HTH	HTH	winged
e6eu0O1	O:283-371,O:449-479	HTH	HTH	winged
e6eu0O2	O:480-567	HTH	HTH	winged
e6eu0O4	O:568-653	Long alpha-hairpin	RPC62 helical hairpin domain	RPC62 helical hairpin domain
e6eu0P3	P:11-77	HTH	HTH	winged
e6eu0P2	P:78-165	HTH	HTH	winged
e6eu0P1	P:166-315	HTH	HTH	winged
e6eu0Y1	Y:61-156	TBP-like	TATA-box binding protein-like	TATA-box binding protein-like
e6eu0Y2	Y:157-240	TBP-like	TATA-box binding protein-like	TATA-box binding protein-like