Domain ID e6eu0J1

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  • A: alpha arrays
  • X: HTH
  • H: RPB10
  • T: RPB10
  • F: RNA_pol_N
UID: 002150563
Type: Automatic domain
Parent: e1twfJ1
Range: J:1-67
Ligands: ZN
PDB: 6eu0
PDB Description: DNA-directed RNA polymerases I, II, and III subunit RPABC5
UniProt: P22139
Hsap BLAST neighbor: P62875
Species:

Structure of domain e6eu0J1

Domains in the same chain:

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e6eu0J1 J:1-67 HTH RPB10 RPB10

Domains in the same PDB:

e6eu0A8 A:1-358 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6eu0A9 A:359-402,A:466-551 cradle loop barrel RIFT-related double psi
e6eu0A2 A:403-465 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6eu0A3 A:552-710 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6eu0A6 A:711-919 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6eu0A1 A:920-1084 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6eu0A5 A:1085-1136,A:1318-1460 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6eu0A7 A:1137-1164,A:1272-1317 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu0A4 A:1165-1233,A:1255-1271 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6eu0B5 B:38-200,B:376-516 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu0B3 B:201-375 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6eu0B1 B:517-605 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6eu0B2 B:606-745 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6eu0B4 B:746-782,B:907-1029 cradle loop barrel RIFT-related double psi
e6eu0B7 B:783-906 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6eu0B6 B:1030-1149 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6eu0C2 C:1-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6eu0C1 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6eu0D1 D:1-71,D:98-160 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6eu0E2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6eu0E1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6eu0F1 F:71-153 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6eu0G1 G:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6eu0G2 G:79-212 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6eu0H1 H:1-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6eu0I1 I:1-41 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6eu0J1 J:1-67 HTH RPB10 RPB10
e6eu0K1 K:41-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6eu0L1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6eu0M1 M:71-196,M:225-267 triple barrel triple barrel Rap30/74 interaction domains-like
e6eu0N1 N:274-314,N:359-422 triple barrel triple barrel Rap30/74 interaction domains-like
e6eu0O5 O:31-129 HTH HTH winged
e6eu0O3 O:130-282 HTH HTH winged
e6eu0O1 O:283-371,O:449-479 HTH HTH winged
e6eu0O2 O:480-567 HTH HTH winged
e6eu0O4 O:568-653 Long alpha-hairpin RPC62 helical hairpin domain RPC62 helical hairpin domain
e6eu0P3 P:11-77 HTH HTH winged
e6eu0P2 P:78-165 HTH HTH winged
e6eu0P1 P:166-315 HTH HTH winged
e6eu0Y1 Y:61-156 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e6eu0Y2 Y:157-240 TBP-like TATA-box binding protein-like TATA-box binding protein-like