Domain ID e6ff4B4

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: EF-G C-terminal domain-like
  • T: EF-G C-terminal domain-like
  • F: EFG_C
UID: 002589465
Type: Automatic domain
Parent: e2dy1A3
Range: B:829-957
PDB: 6ff4
PDB Description: 116 kDa U5 small nuclear ribonucleoprotein component
Species:

Structure of domain e6ff4B4

Domains in the same chain:

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e6ff4B2 B:56-439 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6ff4B1 B:440-580 cradle loop barrel RIFT-related Alanine racemase-C
e6ff4B3 B:581-659 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6ff4B5 B:660-828 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6ff4B4 B:829-957 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e6ff411 1:2-123 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6ff471 7:1-93 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e6ff4A1 A:26-810 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e6ff4A3 A:811-1182 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e6ff4A6 A:1183-1502 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e6ff4A2 A:1503-1754 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6ff4A4 A:1755-2016 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6ff4A5 A:2067-2316 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e6ff4B2 B:56-439 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6ff4B1 B:440-580 cradle loop barrel RIFT-related Alanine racemase-C
e6ff4B3 B:581-659 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6ff4B5 B:660-828 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6ff4B4 B:829-957 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6ff4D1 D:181-500 beta-propeller-like beta-propeller 7-bladed
e6ff4L1 L:8-64 HTH HTH tri-helical
e6ff4L2 L:62-110 HTH HTH tri-helical
e6ff4O1 O:215-467 Repetitive alpha hairpins ARM repeat ARM repeat
e6ff4P3 P:15-89 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e6ff4P1 P:90-220 CCCH zinc finger CCCH zinc finger CCCH zinc finger
e6ff4P2 P:221-308 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6ff4Q1 Q:3-140 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e6ff4s1 s:2-176 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e6ff4u1 u:398-415,u:463-1304 Repetitive alpha hairpins ARM repeat ARM repeat
e6ff4v3 v:1-403 beta-propeller-like beta-propeller 7-bladed
e6ff4v4 v:404-441,v:773-1132 beta-propeller-like beta-propeller 7-bladed
e6ff4v2 v:442-772 beta-propeller-like beta-propeller 7-bladed
e6ff4v1 v:1133-1217 HTH HTH tri-helical
e6ff4V1 V:8-166 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e6ff4x1 x:1-79 RDS3 complex subunit 10 RDS3 complex subunit 10 RDS3 complex subunit 10
e6ff4y1 y:2-101 Glucocorticoid receptor-like LIM domain-like PHD finger-like domain-containing protein 5A
e6ff4Y1 Y:32-126 PWI domain-like PWI domain PWI domain
e6ff4z1 z:12-112 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD