ECOD: domain e6ff4z1

Domain ID e6ff4z1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	002391744
Type:	Automatic domain
Parent:	e1nu4A1
Range:	z:12-112
PDB:	6ff4
PDB Description:	Splicing factor 3B subunit 6
UniProt:	Q9Y3B4
Hsap BLAST neighbor:	Q9Y3B4
Species:	Homo sapiens

Domains in the same chain:

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e6ff4z1	z:12-112	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e6ff411	1:2-123	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e6ff471	7:1-93	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e6ff4A1	A:26-810	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e6ff4A3	A:811-1182	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e6ff4A6	A:1183-1502	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e6ff4A2	A:1503-1754	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e6ff4A4	A:1755-2016	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6ff4A5	A:2067-2316	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e6ff4B2	B:56-439	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6ff4B1	B:440-580	cradle loop barrel	RIFT-related	Alanine racemase-C
e6ff4B3	B:581-659	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e6ff4B5	B:660-828	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6ff4B4	B:829-957	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e6ff4D1	D:181-500	beta-propeller-like	beta-propeller	7-bladed
e6ff4L1	L:8-64	HTH	HTH	tri-helical
e6ff4L2	L:62-110	HTH	HTH	tri-helical
e6ff4O1	O:215-467	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6ff4P3	P:15-89	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e6ff4P1	P:90-220	CCCH zinc finger	CCCH zinc finger	CCCH zinc finger
e6ff4P2	P:221-308	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e6ff4Q1	Q:3-140	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31
e6ff4s1	s:2-176	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e6ff4u1	u:398-415,u:463-1304	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6ff4v3	v:1-403	beta-propeller-like	beta-propeller	7-bladed
e6ff4v4	v:404-441,v:773-1132	beta-propeller-like	beta-propeller	7-bladed
e6ff4v2	v:442-772	beta-propeller-like	beta-propeller	7-bladed
e6ff4v1	v:1133-1217	HTH	HTH	tri-helical
e6ff4V1	V:8-166	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e6ff4x1	x:1-79	RDS3 complex subunit 10	RDS3 complex subunit 10	RDS3 complex subunit 10
e6ff4y1	y:2-101	Glucocorticoid receptor-like	LIM domain-like	PHD finger-like domain-containing protein 5A
e6ff4Y1	Y:32-126	PWI domain-like	PWI domain	PWI domain
e6ff4z1	z:12-112	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD