ECOD: domain e6gmhM9

Domain ID e6gmhM9

A: a+b two layers
X: SH2
H: SH2
T: SH2
F: SH2_2

UID:	002444656
Type:	Automatic domain
Parent:	e3pjpA3
Range:	M:1327-1421
PDB:	6gmh
PDB Description:	Transcription elongation factor SPT6,Transcription elongation factor SPT6,Transcription elongation factor SPT6
UniProt:	Q7KZ85
Hsap BLAST neighbor:	Q7KZ85
Species:	Homo sapiens

Domains in the same chain:

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e6gmhM5	M:284-404	HTH	Tex N-terminal domain	Tex N-terminal domain
e6gmhM7	M:405-421,M:442-470	immunoglobulin/albumin-binding domain-like	Tex bundle domain-like	Tex bundle domain-like
e6gmhM1	M:470-477,M:538-756	Tex N-terminal region-like	Tex N-terminal region-like	Tex N-terminal region-like
e6gmhM2	M:757-944	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6gmhM4	M:945-1039	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6gmhM3	M:1048-1144	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6gmhM6	M:1145-1176,M:1226-1287	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gmhM9	M:1327-1421	SH2	SH2	SH2
e6gmhM8	M:1422-1519	SH2	SH2	SH2

Domains in the same PDB:

e6gmhA1	A:11-152,A:182-350	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6gmhA3	A:345-388,A:450-535	cradle loop barrel	RIFT-related	double psi
e6gmhA6	A:389-449	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6gmhA4	A:534-685	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6gmhA2	A:686-894	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6gmhA5	A:895-1082	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e6gmhA9	A:1083-1134,A:1361-1484,A:1530-1543	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6gmhA8	A:1135-1164,A:1298-1360	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6gmhA7	A:1165-1297	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6gmhB4	B:16-67,B:87-200,B:392-528	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6gmhB3	B:201-391	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6gmhB1	B:529-618	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6gmhB7	B:619-768	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6gmhB5	B:769-805,B:930-1053	cradle loop barrel	RIFT-related	double psi
e6gmhB2	B:806-929	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6gmhB6	B:1054-1174	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6gmhC1	C:2-42,C:179-271	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6gmhC2	C:43-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6gmhD1	D:14-139	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6gmhE1	E:2-138	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e6gmhE2	E:139-210	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e6gmhF1	F:46-127	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e6gmhG1	G:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e6gmhG2	G:78-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gmhH1	H:2-149	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gmhI2	I:9-59	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gmhI1	I:60-125	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gmhJ1	J:1-67	HTH	RPB10	RPB10
e6gmhK1	K:1-115	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6gmhL1	L:13-58	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gmhM5	M:284-404	HTH	Tex N-terminal domain	Tex N-terminal domain
e6gmhM7	M:405-421,M:442-470	immunoglobulin/albumin-binding domain-like	Tex bundle domain-like	Tex bundle domain-like
e6gmhM1	M:470-477,M:538-756	Tex N-terminal region-like	Tex N-terminal region-like	Tex N-terminal region-like
e6gmhM2	M:757-944	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6gmhM4	M:945-1039	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6gmhM3	M:1048-1144	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6gmhM6	M:1145-1176,M:1226-1287	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6gmhM9	M:1327-1421	SH2	SH2	SH2
e6gmhM8	M:1422-1519	SH2	SH2	SH2
e6gmhW1	W:5-304	beta-propeller-like	beta-propeller	7-bladed
e6gmhY1	Y:2-117	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6gmhZ2	Z:176-268	Alpha-beta plaits	N-utilization substance G protein NusG, N-terminal domain	N-utilization substance G protein NusG, N-terminal domain
e6gmhZ1	Z:269-396	SH3	SH3	SH3
e6gmhZ4	Z:416-470	SH3	SH3	SH3
e6gmhZ3	Z:471-525	SH3	SH3	SH3
e6gmhZ7	Z:526-580	SH3	SH3	SH3
e6gmhZ5	Z:581-646	SH3	SH3	SH3
e6gmhZ6	Z:703-754	SH3	SH3	SH3