Domain ID e6gmlC1

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  • A: a+b two layers
  • X: DCoH-like
  • H: RBP11-like subunits of RNA polymerase
  • T: RBP11-like subunits of RNA polymerase
  • F: RNA_pol_L
UID: 002392134
Type: Automatic domain
Parent: e1twfC1
Range: C:2-42,C:179-271
PDB: 6gml
PDB Description: RNA polymerase II subunit C
UniProt: I3LCH3
Hsap BLAST neighbor: P19387
Species: Sus scrofa

Structure of domain e6gmlC1

Domains in the same chain:

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e6gmlC1 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6gmlC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit

Domains in the same PDB:

e6gmlA2 A:11-152,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6gmlA5 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e6gmlA6 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6gmlA7 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6gmlA1 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6gmlA4 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6gmlA3 A:1083-1135,A:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6gmlA8 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6gmlA9 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6gmlB2 B:16-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6gmlB6 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6gmlB7 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6gmlB3 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6gmlB4 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e6gmlB1 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6gmlB5 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6gmlC1 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6gmlC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6gmlD1 D:14-142 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6gmlE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6gmlE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6gmlF1 F:46-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6gmlG1 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6gmlG2 G:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6gmlH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6gmlI2 I:9-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6gmlI1 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6gmlJ1 J:1-67 HTH RPB10 RPB10
e6gmlK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6gmlL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6gmlY1 Y:2-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6gmlZ2 Z:176-268 Alpha-beta plaits N-utilization substance G protein NusG, N-terminal domain N-utilization substance G protein NusG, N-terminal domain
e6gmlZ1 Z:269-396 SH3 SH3 SH3
e6gmlZ4 Z:416-470 SH3 SH3 SH3
e6gmlZ3 Z:471-527 SH3 SH3 SH3
e6gmlZ7 Z:528-580 SH3 SH3 SH3
e6gmlZ5 Z:581-646 SH3 SH3 SH3
e6gmlZ6 Z:703-753 SH3 SH3 SH3