Domain ID e6kf3A2

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: RNA_pol_Rpb1_2
UID: 002629810
Type: Automatic domain
Parent: e1twfA1
Range: A:313-499
Ligands: MG
PDB: 6kf3
PDB Description: DNA-directed RNA polymerase subunit
Species:

Structure of domain e6kf3A2

Domains in the same chain:

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e6kf3A4 A:5-312 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6kf3A2 A:313-499 cradle loop barrel RIFT-related double psi
e6kf3A3 A:500-666 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6kf3A1 A:667-904 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit

Domains in the same PDB:

e6kf3A4 A:5-312 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6kf3A2 A:313-499 cradle loop barrel RIFT-related double psi
e6kf3A3 A:500-666 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6kf3A1 A:667-904 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6kf3B3 B:9-174,B:347-484 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B4 B:173-346 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B2 B:485-574 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6kf3B6 B:574-713 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B1 B:714-751,B:877-999 cradle loop barrel RIFT-related double psi
e6kf3B7 B:752-876 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6kf3B5 B:1000-1009,B:1032-1122 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf3C1 C:2-59 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6kf3C2 C:60-109,C:268-389 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6kf3C4 C:110-141,C:225-267 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf3C3 C:142-224 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf3D2 D:2-37,D:149-188,D:208-258 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6kf3D1 D:38-148 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6kf3E1 E:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6kf3E2 E:79-181 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6kf3F1 F:1-122 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6kf3H1 H:6-81 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6kf3K1 K:2-57 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6kf3L1 L:1-94 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6kf3N1 N:1-65 HTH RPB10 RPB10
e6kf3P1 P:6-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related