ECOD: domain e6kf3B5

Domain ID e6kf3B5

A: a+b complex topology
X: C-terminal domain in beta subunit of DNA dependent RNA-polymerase
H: C-terminal domain in beta subunit of DNA dependent RNA-polymerase
T: C-terminal domain in beta subunit of DNA dependent RNA-polymerase
F: RNA_pol_Rpb2_7

UID:	002629817
Type:	Automatic domain
Parent:	e1twfB8
Range:	B:1000-1009,B:1032-1122
Ligands:	ZN
PDB:	6kf3
PDB Description:	DNA-directed RNA polymerase subunit beta
Species:

Domains in the same chain:

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e6kf3B3	B:9-174,B:347-484	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B4	B:173-346	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B2	B:485-574	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6kf3B6	B:574-713	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B1	B:714-751,B:877-999	cradle loop barrel	RIFT-related	double psi
e6kf3B7	B:752-876	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6kf3B5	B:1000-1009,B:1032-1122	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e6kf3A4	A:5-312	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6kf3A2	A:313-499	cradle loop barrel	RIFT-related	double psi
e6kf3A3	A:500-666	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6kf3A1	A:667-904	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6kf3B3	B:9-174,B:347-484	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B4	B:173-346	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B2	B:485-574	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e6kf3B6	B:574-713	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6kf3B1	B:714-751,B:877-999	cradle loop barrel	RIFT-related	double psi
e6kf3B7	B:752-876	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6kf3B5	B:1000-1009,B:1032-1122	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6kf3C1	C:2-59	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e6kf3C2	C:60-109,C:268-389	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6kf3C4	C:110-141,C:225-267	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf3C3	C:142-224	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6kf3D2	D:2-37,D:149-188,D:208-258	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6kf3D1	D:38-148	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6kf3E1	E:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e6kf3E2	E:79-181	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6kf3F1	F:1-122	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6kf3H1	H:6-81	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e6kf3K1	K:2-57	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e6kf3L1	L:1-94	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6kf3N1	N:1-65	HTH	RPB10	RPB10
e6kf3P1	P:6-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related