Domain ID e6vmiE1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 002653452
Type: Automatic domain
Parent: e1vqoB1
Range: E:43-348
Ligands: MG
PDB: 6vmi
PDB Description: 39S ribosomal protein L3, mitochondrial
Species:

Structure of domain e6vmiE1

Domains in the same chain:

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e6vmiE1 E:43-348 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e6vmi01 0:79-186 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6vmi11 1:14-65 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6vmi21 2:47-92 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e6vmi31 3:94-162 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e6vmi41 4:66-103 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e6vmi51 5:30-423 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6vmi61 6:27-380 Immunoglobulin-like beta-sandwich Immunoglobulin-related PEBP-like
e6vmi71 7:32-68,7:139-328 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain
e6vmi72 7:69-138 beta-Grasp Ubiquitin-related Ubiquitin-like
e6vmi81 8:83-181 Mitochondrial 54S ribosomal protein L28 Mitochondrial 54S ribosomal protein L28 Mitochondrial 54S ribosomal protein L28
e6vmi91 9:14-137 Mitochondrial 54S ribosomal protein L27 Mitochondrial 54S ribosomal protein L27 Mitochondrial 54S ribosomal protein L27
e6vmia1 a:35-142 Mitoribosomal protein mL42 Mitoribosomal protein mL42 Mitoribosomal protein mL42
e6vmiA01 A0:2-215 SH3 Mitoribosomal protein mS34 Mitoribosomal protein mS34
e6vmiA11 A1:49-323 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6vmiA21 A2:2-117 p8-MTCP1-related p8-MTCP1-related p8-MTCP1-related
e6vmiA31 A3:128-199 Mitoribosomal protein mS38 Mitoribosomal protein mS38 Mitoribosomal protein mS38
e6vmiAB1 AB:56-275 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e6vmiAC1 AC:36-167 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e6vmiAD2 AD:88-215 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6vmiAD1 AD:216-286 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6vmiAD3 AD:287-430 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6vmiAE1 AE:2-123 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e6vmiAF1 AF:35-242 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6vmiAG1 AG:70-176,AG:198-396 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6vmiAH1 AH:68-189 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6vmiAI1 AI:59-194 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6vmiAJ1 AJ:31-138 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6vmiAK1 AK:28-128 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e6vmiAL1 AL:64-237 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6vmiAM1 AM:10-125 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e6vmiAN1 AN:5-111 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6vmiAO1 AO:49-238 HTH HTH tri-helical
e6vmiAP1 AP:47-142 HTH HTH tri-helical
e6vmiAQ1 AQ:2-87 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e6vmiAR1 AR:66-357 Mitoribosomal protein mS22 Mitoribosomal protein mS22 Mitoribosomal protein mS22
e6vmiAS1 AS:2-136 RuvA-C Mitoribosomal protein mS23 Mitoribosomal protein mS23
e6vmiAT1 AT:2-169 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6vmiAU1 AU:27-203 Mitoribosomal protein mS26 Mitoribosomal protein mS26 Mitoribosomal protein mS26
e6vmiAV1 AV:28-291,AV:312-390 Repetitive alpha hairpins ARM repeat ARM repeat
e6vmiAW1 AW:77-173 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6vmiAX2 AX:46-346 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6vmiAX1 AX:347-398 Histone-like Histone-related AAA+ ATPase lid domain
e6vmiAY1 AY:276-395 Mitoribosomal protein mS31 Mitoribosomal protein mS31 Mitoribosomal protein mS31
e6vmiAZ1 AZ:4-102 Mitoribosomal protein mS33 Mitoribosomal protein mS33 Mitoribosomal protein mS33
e6vmib1 b:2-149 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6vmic2 c:31-233 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e6vmic1 c:234-319 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e6vmid1 d:38-294 Cystatin-like NTF2-like NTF2-like
e6vmiD1 D:61-178 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6vmiD2 D:179-299 SH3 SH3 SH3
e6vmie1 e:43-279 beta-Grasp Nudix Nudix
e6vmiE1 E:43-348 cradle loop barrel RIFT-related Alanine racemase-C
e6vmif1 f:48-193 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e6vmiF1 F:45-273 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e6vmig1 g:35-166 Glucose permease domain IIB-like eIF1-like eIF1-like
e6vmih1 h:49-131 ACP-like Acyl-carrier protein (ACP) Acyl-carrier protein (ACP)
e6vmiH1 H:53-150 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e6vmii1 i:32-128 Long alpha-hairpin Mitoribosomal protein mL51 Mitoribosomal protein mL51
e6vmiI1 I:29-207 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e6vmij1 j:24-116 Mitoribosomal protein mL52 Mitoribosomal protein mL52 Mitoribosomal protein mL52
e6vmiJ1 J:18-83 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e6vmiJ2 J:83-192 HTH HTH Ribosomal protein L11, C-terminal domain
e6vmik1 k:2-97 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6vmiK1 K:2-178 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e6vmiL1 L:31-145 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6vmim1 m:34-78 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e6vmiM1 M:10-296 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e6vmiN1 N:30-251 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e6vmio1 o:9-102 Mitoribosomal protein mL63 Mitoribosomal protein mL63 Mitoribosomal protein mL63
e6vmiO1 O:9-136 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e6vmip1 p:38-196 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e6vmiP1 P:38-180 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6vmiQ1 Q:74-292 SH3 SH3 SH3
e6vmir1 r:35-196 HTH HTH tri-helical
e6vmiR1 R:10-124 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e6vmis1 s:40-119,s:140-432 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6vmiS1 S:49-204 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e6vmiT1 T:47-212 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e6vmiTA1 TA:46-90 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6vmiTB1 TB:64-90 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6vmiTC1 TC:128-198 ClpS-like ClpS-related ClpS-related
e6vmiU1 U:2-153 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6vmiv4 v:40-321 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6vmiv2 v:320-445 cradle loop barrel RIFT-related Alanine racemase-C
e6vmiv5 v:446-524 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6vmiv1 v:525-643 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6vmiv3 v:644-751 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6vmiV1 V:11-216 SH3 SH3 SH3
e6vmiW1 W:38-148 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6vmiX1 X:2-244 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e6vmiY1 Y:63-238 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e6vmiZ1 Z:35-154 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e