ECOD: domain e6vmid1

Domain ID e6vmid1

A: a+b two layers
X: Cystatin-like
H: NTF2-like
T: NTF2-like
F: Tim44

UID:	002653461
Type:	Automatic domain
Parent:	e4v1ai1
Range:	d:38-294
PDB:	6vmi
PDB Description:	39S ribosomal protein L45, mitochondrial
Species:

Domains in the same chain:

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e6vmid1	d:38-294	Cystatin-like	NTF2-like	NTF2-like

Domains in the same PDB:

e6vmi01	0:79-186	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6vmi11	1:14-65	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e6vmi21	2:47-92	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e6vmi31	3:94-162	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e6vmi41	4:66-103	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e6vmi51	5:30-423	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e6vmi61	6:27-380	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	PEBP-like
e6vmi71	7:32-68,7:139-328	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	ThrRS/AlaRS editing domain
e6vmi72	7:69-138	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e6vmi81	8:83-181	Mitochondrial 54S ribosomal protein L28	Mitochondrial 54S ribosomal protein L28	Mitochondrial 54S ribosomal protein L28
e6vmi91	9:14-137	Mitochondrial 54S ribosomal protein L27	Mitochondrial 54S ribosomal protein L27	Mitochondrial 54S ribosomal protein L27
e6vmia1	a:35-142	Mitoribosomal protein mL42	Mitoribosomal protein mL42	Mitoribosomal protein mL42
e6vmiA01	A0:2-215	SH3	Mitoribosomal protein mS34	Mitoribosomal protein mS34
e6vmiA11	A1:49-323	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like
e6vmiA21	A2:2-117	p8-MTCP1-related	p8-MTCP1-related	p8-MTCP1-related
e6vmiA31	A3:128-199	Mitoribosomal protein mS38	Mitoribosomal protein mS38	Mitoribosomal protein mS38
e6vmiAB1	AB:56-275	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e6vmiAC1	AC:36-167	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6vmiAD2	AD:88-215	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e6vmiAD1	AD:216-286	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6vmiAD3	AD:287-430	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6vmiAE1	AE:2-123	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e6vmiAF1	AF:35-242	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e6vmiAG1	AG:70-176,AG:198-396	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6vmiAH1	AH:68-189	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6vmiAI1	AI:59-194	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6vmiAJ1	AJ:31-138	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6vmiAK1	AK:28-128	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e6vmiAL1	AL:64-237	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e6vmiAM1	AM:10-125	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e6vmiAN1	AN:5-111	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6vmiAO1	AO:49-238	HTH	HTH	tri-helical
e6vmiAP1	AP:47-142	HTH	HTH	tri-helical
e6vmiAQ1	AQ:2-87	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21
e6vmiAR1	AR:66-357	Mitoribosomal protein mS22	Mitoribosomal protein mS22	Mitoribosomal protein mS22
e6vmiAS1	AS:2-136	RuvA-C	Mitoribosomal protein mS23	Mitoribosomal protein mS23
e6vmiAT1	AT:2-169	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e6vmiAU1	AU:27-203	Mitoribosomal protein mS26	Mitoribosomal protein mS26	Mitoribosomal protein mS26
e6vmiAV1	AV:28-291,AV:312-390	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6vmiAW1	AW:77-173	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6vmiAX2	AX:46-346	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6vmiAX1	AX:347-398	Histone-like	Histone-related	AAA+ ATPase lid domain
e6vmiAY1	AY:276-395	Mitoribosomal protein mS31	Mitoribosomal protein mS31	Mitoribosomal protein mS31
e6vmiAZ1	AZ:4-102	Mitoribosomal protein mS33	Mitoribosomal protein mS33	Mitoribosomal protein mS33
e6vmib1	b:2-149	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e6vmic2	c:31-233	RNase III catalytic domain-like	RNase III catalytic domain-like	RNase III catalytic domain-like
e6vmic1	c:234-319	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e6vmid1	d:38-294	Cystatin-like	NTF2-like	NTF2-like
e6vmiD1	D:61-178	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6vmiD2	D:179-299	SH3	SH3	SH3
e6vmie1	e:43-279	beta-Grasp	Nudix	Nudix
e6vmiE1	E:43-348	cradle loop barrel	RIFT-related	Alanine racemase-C
e6vmif1	f:48-193	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e6vmiF1	F:45-273	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e6vmig1	g:35-166	Glucose permease domain IIB-like	eIF1-like	eIF1-like
e6vmih1	h:49-131	ACP-like	Acyl-carrier protein (ACP)	Acyl-carrier protein (ACP)
e6vmiH1	H:53-150	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e6vmii1	i:32-128	Long alpha-hairpin	Mitoribosomal protein mL51	Mitoribosomal protein mL51
e6vmiI1	I:29-207	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e6vmij1	j:24-116	Mitoribosomal protein mL52	Mitoribosomal protein mL52	Mitoribosomal protein mL52
e6vmiJ1	J:18-83	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e6vmiJ2	J:83-192	HTH	HTH	Ribosomal protein L11, C-terminal domain
e6vmik1	k:2-97	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e6vmiK1	K:2-178	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e6vmiL1	L:31-145	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e6vmim1	m:34-78	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e6vmiM1	M:10-296	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e6vmiN1	N:30-251	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e6vmio1	o:9-102	Mitoribosomal protein mL63	Mitoribosomal protein mL63	Mitoribosomal protein mL63
e6vmiO1	O:9-136	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e6vmip1	p:38-196	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like
e6vmiP1	P:38-180	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e6vmiQ1	Q:74-292	SH3	SH3	SH3
e6vmir1	r:35-196	HTH	HTH	tri-helical
e6vmiR1	R:10-124	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e6vmis1	s:40-119,s:140-432	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e6vmiS1	S:49-204	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e6vmiT1	T:47-212	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e6vmiTA1	TA:46-90	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6vmiTB1	TB:64-90	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	Ribosomal protein L7/12, oligomerisation (N-terminal) domain	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e6vmiTC1	TC:128-198	ClpS-like	ClpS-related	ClpS-related
e6vmiU1	U:2-153	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e6vmiv4	v:40-321	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6vmiv2	v:320-445	cradle loop barrel	RIFT-related	Alanine racemase-C
e6vmiv5	v:446-524	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e6vmiv1	v:525-643	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6vmiv3	v:644-751	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e6vmiV1	V:11-216	SH3	SH3	SH3
e6vmiW1	W:38-148	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e6vmiX1	X:2-244	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e6vmiY1	Y:63-238	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e6vmiZ1	Z:35-154	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e