Domain ID e6wmrD8

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: RNA_pol_Rpb1_2
UID: 002715031
Type: Automatic domain
Parent: e1twfA1
Range: D:332-375,D:416-496
Ligands: MG
PDB: 6wmr
PDB Description: DNA-directed RNA polymerase subunit beta'
Species:

Structure of domain e6wmrD8

Domains in the same chain:

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e6wmrD6 D:12-331 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6wmrD8 D:332-375,D:416-496 cradle loop barrel RIFT-related double psi
e6wmrD1 D:376-415 inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e6wmrD2 D:497-636 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6wmrD5 D:637-807 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6wmrD7 D:808-890 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6wmrD3 D:891-928,D:1124-1138,D:1204-1365 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6wmrD4 D:1139-1203 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e6wmrA2 A:8-53,A:172-230 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6wmrA1 A:54-171 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6wmrB2 B:3-50,B:171-232 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6wmrB1 B:51-170 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6wmrC2 C:1-156,C:455-580 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6wmrC5 C:157-214,C:345-454 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6wmrC1 C:581-716 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6wmrC3 C:717-792 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmrC7 C:793-830,C:1074-1249 cradle loop barrel RIFT-related double psi
e6wmrC6 C:831-977,C:1023-1073 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmrC4 C:1250-1356 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6wmrD6 D:12-331 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6wmrD8 D:332-375,D:416-496 cradle loop barrel RIFT-related double psi
e6wmrD1 D:376-415 inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e6wmrD2 D:497-636 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6wmrD5 D:637-807 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6wmrD7 D:808-890 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6wmrD3 D:891-928,D:1124-1138,D:1204-1365 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6wmrD4 D:1139-1203 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6wmrE1 E:1-72 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit
e6wmrM2 M:1-77 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6wmrM1 M:76-201 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C
e6wmrS1 S:2-78 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e6wmrS2 S:79-210 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C
e6wmrZ1 Z:104-167,Z:193-412 Sigma2 domain-like Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors
e6wmrZ3 Z:413-474 HTH HTH tri-helical
e6wmrZ2 Z:475-577 HTH HTH tri-helical