ECOD: domain e6xasI6

Domain ID e6xasI6

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: double psi
F: RNA_pol_Rpb2_6

UID:	002716269
Type:	Automatic domain
Parent:	e4s20C1
Range:	I:791-827,I:1063-1239
PDB:	6xas
PDB Description:	DNA-directed RNA polymerase subunit beta
Species:

Domains in the same chain:

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e6xasI10	I:1-151,I:452-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xasI7	I:152-225,I:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6xasI3	I:226-234,I:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasI2	I:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasI5	I:578-712	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6xasI1	I:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasI6	I:791-827,I:1063-1239	cradle loop barrel	RIFT-related	double psi
e6xasI9	I:828-938,I:1045-1062	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasI4	I:939-982,I:1002-1044	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6xasI8	I:1240-1342	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e6xasA2	A:30-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasA1	A:128-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6xasB2	B:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6xasB1	B:48-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasB3	B:128-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6xasC1	C:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6xasC3	C:48-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasC2	C:128-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6xasD3	D:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6xasD1	D:48-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasD2	D:128-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6xasE3	E:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6xasE1	E:48-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasE2	E:128-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6xasF2	F:1-10,F:30-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6xasF1	F:48-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasF3	F:128-353	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6xasG1	G:1-127	Transcription factor NusA, N-terminal domain	Transcription factor NusA, N-terminal domain	Transcription factor NusA, N-terminal domain
e6xasG2	G:126-200	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6xasH2	H:4-52,H:179-232	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6xasH1	H:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6xasI10	I:1-151,I:452-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xasI7	I:152-225,I:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6xasI3	I:226-234,I:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasI2	I:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasI5	I:578-712	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6xasI1	I:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasI6	I:791-827,I:1063-1239	cradle loop barrel	RIFT-related	double psi
e6xasI9	I:828-938,I:1045-1062	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasI4	I:939-982,I:1002-1044	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6xasI8	I:1240-1342	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xasJ1	J:10-341	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6xasJ4	J:334-498	cradle loop barrel	RIFT-related	double psi
e6xasJ8	J:499-638	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6xasJ3	J:639-810	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6xasJ7	J:811-894	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasJ6	J:895-931,J:1214-1373	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6xasJ9	J:932-1022	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasJ5	J:1023-1131	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasJ2	J:1132-1215	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6xasK2	K:7-52,K:167-220	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6xasK3	K:53-166	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6xasK1	K:221-234,K:264-315	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6xasW1	W:2-56	RPB6/omega subunit-like	RPB6/omega subunit-like	RNA polymerase omega subunit