Domain ID e6xasJ4

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: RNA_pol_Rpb1_2
UID: 002716277
Type: Automatic domain
Parent: e1twfA1
Range: J:334-498
Ligands: MG
PDB: 6xas
PDB Description: DNA-directed RNA polymerase subunit beta'
Species:

Structure of domain e6xasJ4

Domains in the same chain:

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e6xasJ1 J:10-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6xasJ4 J:334-498 cradle loop barrel RIFT-related double psi
e6xasJ8 J:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6xasJ3 J:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6xasJ7 J:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasJ6 J:895-931,J:1214-1373 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6xasJ9 J:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasJ5 J:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasJ2 J:1132-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e6xasA2 A:30-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasA1 A:128-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6xasB2 B:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6xasB1 B:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasB3 B:128-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6xasC1 C:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6xasC3 C:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasC2 C:128-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6xasD3 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6xasD1 D:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasD2 D:128-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6xasE3 E:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6xasE1 E:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasE2 E:128-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6xasF2 F:1-10,F:30-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e6xasF1 F:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasF3 F:128-353 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6xasG1 G:1-127 Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain
e6xasG2 G:126-200 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6xasH2 H:4-52,H:179-232 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6xasH1 H:53-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6xasI10 I:1-151,I:452-577 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xasI7 I:152-225,I:343-451 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6xasI3 I:226-234,I:289-342 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasI2 I:235-288 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasI5 I:578-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6xasI1 I:713-790 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasI6 I:791-827,I:1063-1239 cradle loop barrel RIFT-related double psi
e6xasI9 I:828-938,I:1045-1062 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasI4 I:939-982,I:1002-1044 Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6xasI8 I:1240-1342 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xasJ1 J:10-341 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6xasJ4 J:334-498 cradle loop barrel RIFT-related double psi
e6xasJ8 J:499-638 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6xasJ3 J:639-810 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6xasJ7 J:811-894 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xasJ6 J:895-931,J:1214-1373 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6xasJ9 J:932-1022 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasJ5 J:1023-1131 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasJ2 J:1132-1215 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xasK2 K:7-52,K:167-220 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6xasK3 K:53-166 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6xasK1 K:221-234,K:264-315 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6xasW1 W:2-56 RPB6/omega subunit-like RPB6/omega subunit-like RNA polymerase omega subunit