ECOD: domain e6z9qX6

Domain ID e6z9qX6

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: double psi
F: RNA_pol_Rpb2_6

UID:	002675447
Type:	Automatic domain
Parent:	e4s20C1
Range:	X:791-827,X:1063-1239
PDB:	6z9q
PDB Description:	DNA-directed RNA polymerase subunit beta
Species:

Domains in the same chain:

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e6z9qX2	X:2-151,X:452-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9qX5	X:152-225,X:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6z9qX1	X:226-234,X:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9qX8	X:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9qX9	X:578-712	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6z9qX7	X:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9qX6	X:791-827,X:1063-1239	cradle loop barrel	RIFT-related	double psi
e6z9qX4	X:828-938,X:1045-1062	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9qX3	X:939-1044	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6z9qX10	X:1240-1341	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e6z9qa1	a:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9qa3	a:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qa2	a:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9qA2	A:1-127	Transcription factor NusA, N-terminal domain	Transcription factor NusA, N-terminal domain	Transcription factor NusA, N-terminal domain
e6z9qA4	A:126-199	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qA6	A:199-278	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6z9qA1	A:279-346	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e6z9qA3	A:345-422	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6z9qA5	A:423-495	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6z9qb3	b:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9qb1	b:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qb2	b:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9qc1	c:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9qc2	c:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qc3	c:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9qd3	d:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9qd1	d:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qd2	d:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9qe2	e:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9qe1	e:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qe3	e:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9qf3	f:1-47	LEM/SAP HeH motif-like	LEM/SAP HeH motif	LEM/SAP HeH motif
e6z9qf1	f:48-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6z9qf2	f:129-417	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6z9qG1	G:6-117	Alpha-beta plaits	N-utilization substance G protein NusG, N-terminal domain	N-utilization substance G protein NusG, N-terminal domain
e6z9qU2	U:4-52,U:174-238	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6z9qU1	U:53-173	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6z9qV1	V:5-52,V:179-236	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e6z9qV3	V:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e6z9qV2	V:237-325	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e6z9qW1	W:2-80	RPB6/omega subunit-like	RPB6/omega subunit-like	RNA polymerase omega subunit
e6z9qX2	X:2-151,X:452-577	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9qX5	X:152-225,X:343-451	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e6z9qX1	X:226-234,X:289-342	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9qX8	X:235-288	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9qX9	X:578-712	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e6z9qX7	X:713-790	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9qX6	X:791-827,X:1063-1239	cradle loop barrel	RIFT-related	double psi
e6z9qX4	X:828-938,X:1045-1062	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9qX3	X:939-1044	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit
e6z9qX10	X:1240-1341	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6z9qY3	Y:16-341	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e6z9qY7	Y:334-498	cradle loop barrel	RIFT-related	double psi
e6z9qY6	Y:499-638	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e6z9qY2	Y:639-810	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e6z9qY8	Y:811-894	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6z9qY1	Y:895-931,Y:1214-1373	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e6z9qY4	Y:932-1022	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9qY9	Y:1023-1132	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e6z9qY5	Y:1133-1215	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif