Domain ID e7egao5

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  • A: a+b complex topology
  • X: first helical domain in RNA-polymerase beta-prime subunit
  • H: first helical domain in RNA-polymerase beta-prime subunit
  • T: first helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_3
UID: 002729669
Type: Automatic domain
Parent: e1twfA6
Range: o:534-685
PDB: 7ega
PDB Description: DNA-directed RNA polymerase subunit
Species:

Structure of domain e7egao5

Domains in the same chain:

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e7egao1 o:11-155,o:181-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7egao6 o:351-388,o:450-533 cradle loop barrel RIFT-related double psi
e7egao4 o:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7egao5 o:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7egao9 o:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7egao7 o:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7egao3 o:1083-1135,o:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7egao2 o:1136-1164,o:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7egao8 o:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7egaB2 B:19-254 Baculovirus p35 protein-related Baculovirus p35 protein-related Baculovirus p35 protein-related
e7egaB1 B:255-648 Zincin-like Metalloproteases ("zincins") catalytic domain Metalloproteases ("zincins") catalytic domain
e7egaB3 B:649-988 Repetitive alpha hairpins ARM repeat ARM repeat
e7egae1 e:202-343,e:363-380 Taf5 N-terminal domain-like Taf5 N-terminal domain-like Taf5 N-terminal domain-like
e7egae2 e:417-799 beta-propeller-like beta-propeller 8-bladed
e7egaE2 E:209-378 Taf5 N-terminal domain-like Taf5 N-terminal domain-like Taf5 N-terminal domain-like
e7egaE1 E:417-798 beta-propeller-like beta-propeller 8-bladed
e7egaj1 j:114-218 Histone-like Histone-related Histone
e7egaJ1 J:114-216 Histone-like Histone-related Histone
e7egak1 k:114-211 Histone-like Histone-related Histone
e7egaL1 L:55-130 Histone-like Histone-related Histone
e7egao1 o:11-155,o:181-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7egao6 o:351-388,o:450-533 cradle loop barrel RIFT-related double psi
e7egao4 o:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7egao5 o:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7egao9 o:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7egao7 o:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7egao3 o:1083-1135,o:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7egao2 o:1136-1164,o:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7egao8 o:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7egaO1 O:3-53 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7egaO2 O:54-99 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7egap3 p:16-67,p:87-200,p:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7egap5 p:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7egap6 p:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7egap2 p:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7egap4 p:769-805,p:930-1053 cradle loop barrel RIFT-related double psi
e7egap7 p:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7egap1 p:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7egaP2 P:161-255 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7egaP1 P:256-337 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7egaq1 q:2-42,q:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7egaq2 q:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7egaQ1 Q:9-63,Q:310-321 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7egaQ2 Q:322-376 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7egar1 r:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7egaR2 R:13-51 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7egaR1 R:105-207 HTH HTH Cyclin-like
e7egaR3 R:208-316 HTH HTH Cyclin-like
e7egas2 s:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7egas1 s:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7egaS1 S:5-54,S:93-150 triple barrel triple barrel Rap30/74 interaction domains-like
e7egat1 t:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7egau2 u:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7egau1 u:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7egaU1 U:11-100,U:175-203 HTH HTH winged
e7egaU2 U:101-174 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7egav1 v:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7egaV1 V:68-146 HTH HTH winged
e7egaV2 V:147-207 HTH HTH winged
e7egaV3 V:208-239 HTH HTH winged
e7egaw1 w:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7egaw2 w:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7egax1 x:1-64 HTH RPB10 RPB10
e7egay1 y:1-117 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7egaz1 z:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related