ECOD: domain e7egau2

Domain ID e7egau2

A: a+b two layers
X: Dodecin subunit-like
H: Flavin-binding protein dodecin-like
T: Flavin-binding protein dodecin-like
F: SHS2_Rpb7-N

UID:	002729694
Type:	Automatic domain
Parent:	e1go3E2
Range:	u:1-77
PDB:	7ega
PDB Description:	DNA-directed RNA polymerase II subunit RPB7
Species:

Domains in the same chain:

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e7egau2	u:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7egau1	u:78-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e7egaB2	B:19-254	Baculovirus p35 protein-related	Baculovirus p35 protein-related	Baculovirus p35 protein-related
e7egaB1	B:255-648	Zincin-like	Metalloproteases ("zincins") catalytic domain	Metalloproteases ("zincins") catalytic domain
e7egaB3	B:649-988	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7egae1	e:202-343,e:363-380	Taf5 N-terminal domain-like	Taf5 N-terminal domain-like	Taf5 N-terminal domain-like
e7egae2	e:417-799	beta-propeller-like	beta-propeller	8-bladed
e7egaE2	E:209-378	Taf5 N-terminal domain-like	Taf5 N-terminal domain-like	Taf5 N-terminal domain-like
e7egaE1	E:417-798	beta-propeller-like	beta-propeller	8-bladed
e7egaj1	j:114-218	Histone-like	Histone-related	Histone
e7egaJ1	J:114-216	Histone-like	Histone-related	Histone
e7egak1	k:114-211	Histone-like	Histone-related	Histone
e7egaL1	L:55-130	Histone-like	Histone-related	Histone
e7egao1	o:11-155,o:181-350	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7egao6	o:351-388,o:450-533	cradle loop barrel	RIFT-related	double psi
e7egao4	o:389-449	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7egao5	o:534-685	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7egao9	o:686-894	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7egao7	o:895-1082	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7egao3	o:1083-1135,o:1361-1487	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7egao2	o:1136-1164,o:1298-1360	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7egao8	o:1165-1297	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7egaO1	O:3-53	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain
e7egaO2	O:54-99	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain
e7egap3	p:16-67,p:87-200,p:392-528	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7egap5	p:201-391	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7egap6	p:529-618	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7egap2	p:619-768	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7egap4	p:769-805,p:930-1053	cradle loop barrel	RIFT-related	double psi
e7egap7	p:806-929	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7egap1	p:1054-1174	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7egaP2	P:161-255	TBP-like	TATA-box binding protein-like	TATA-box binding protein-like
e7egaP1	P:256-337	TBP-like	TATA-box binding protein-like	TATA-box binding protein-like
e7egaq1	q:2-42,q:179-271	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7egaq2	q:43-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7egaQ1	Q:9-63,Q:310-321	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain
e7egaQ2	Q:322-376	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain
e7egar1	r:14-141	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7egaR2	R:13-51	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7egaR1	R:105-207	HTH	HTH	Cyclin-like
e7egaR3	R:208-316	HTH	HTH	Cyclin-like
e7egas2	s:2-138	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e7egas1	s:139-210	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7egaS1	S:5-54,S:93-150	triple barrel	triple barrel	Rap30/74 interaction domains-like
e7egat1	t:49-127	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7egau2	u:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7egau1	u:78-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7egaU1	U:11-100,U:175-203	HTH	HTH	winged
e7egaU2	U:101-174	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7egav1	v:2-149	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7egaV1	V:68-146	HTH	HTH	winged
e7egaV2	V:147-207	HTH	HTH	winged
e7egaV3	V:208-239	HTH	HTH	winged
e7egaw1	w:12-59	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7egaw2	w:60-125	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7egax1	x:1-64	HTH	RPB10	RPB10
e7egay1	y:1-117	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7egaz1	z:15-58	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related