ECOD: domain e7nkxD1

Domain ID e7nkxD1

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: RNA_pol_Rpb4

UID:	002772043
Type:	Automatic domain
Parent:	e2c35A1
Range:	D:1-69,D:132-221
PDB:	7nkx
PDB Description:	DNA-directed RNA polymerase II subunit RPB4
Species:

Domains in the same chain:

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e7nkxD1	D:1-69,D:132-221	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e7nkxa1	a:59-134	Histone-like	Histone-related	Histone
e7nkxA1	A:3-336	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7nkxA3	A:331-374,A:436-521	cradle loop barrel	RIFT-related	double psi
e7nkxA6	A:375-435	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nkxA4	A:520-662	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7nkxA2	A:663-871	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7nkxA5	A:872-1060	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nkxA8	A:1061-1112,A:1331-1454	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7nkxA9	A:1113-1141,A:1273-1330	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkxA7	A:1142-1272	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkxb1	b:23-102	Histone-like	Histone-related	Histone
e7nkxB1	B:20-70,B:90-134,B:164-217,B:404-541	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkxB5	B:218-404	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nkxB6	B:542-630	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7nkxB3	B:631-813	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nkxB2	B:814-850,B:975-1097	cradle loop barrel	RIFT-related	double psi
e7nkxB7	B:851-974	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7nkxB4	B:1098-1223	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkxc1	c:16-118	Histone-like	Histone-related	Histone
e7nkxC2	C:4-41,C:173-268	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7nkxC1	C:42-172	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7nkxd1	d:30-121	Histone-like	Histone-related	Histone
e7nkxD1	D:1-69,D:132-221	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7nkxe1	e:39-135	Histone-like	Histone-related	Histone
e7nkxE1	E:2-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e7nkxE2	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7nkxf1	f:25-102	Histone-like	Histone-related	Histone
e7nkxF1	F:69-155	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7nkxg1	g:16-108	Histone-like	Histone-related	Histone
e7nkxG1	G:1-80	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7nkxG2	G:81-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7nkxh1	h:29-121	Histone-like	Histone-related	Histone
e7nkxH1	H:2-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7nkxI2	I:2-50	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkxI1	I:51-120	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkxJ1	J:1-65	HTH	RPB10	RPB10
e7nkxK1	K:1-115	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7nkxL1	L:27-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkxW3	W:175-260	SH3	Chromo domain-like	Chromo domain-like
e7nkxW4	W:261-345	SH3	Chromo domain-like	Chromo domain-like
e7nkxW2	W:346-606	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7nkxW1	W:607-841	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7nkxY1	Y:3-100	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkxZ1	Z:285-377	Alpha-beta plaits	N-utilization substance G protein NusG, N-terminal domain	N-utilization substance G protein NusG, N-terminal domain
e7nkxZ2	Z:798-860	SH3	SH3	SH3