Domain ID e7nkxD1

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: RNA_pol_Rpb4
UID: 002772043
Type: Automatic domain
Parent: e2c35A1
Range: D:1-69,D:132-221
PDB: 7nkx
PDB Description: DNA-directed RNA polymerase II subunit RPB4
Species:

Structure of domain e7nkxD1

Domains in the same chain:

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e7nkxD1 D:1-69,D:132-221 HhH/H2TH SAM/DNA-glycosylase SAM domain-like

Domains in the same PDB:

e7nkxa1 a:59-134 Histone-like Histone-related Histone
e7nkxA1 A:3-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nkxA3 A:331-374,A:436-521 cradle loop barrel RIFT-related double psi
e7nkxA6 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nkxA4 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nkxA2 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nkxA5 A:872-1060 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nkxA8 A:1061-1112,A:1331-1454 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nkxA9 A:1113-1141,A:1273-1330 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkxA7 A:1142-1272 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkxb1 b:23-102 Histone-like Histone-related Histone
e7nkxB1 B:20-70,B:90-134,B:164-217,B:404-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkxB5 B:218-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nkxB6 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7nkxB3 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nkxB2 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e7nkxB7 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7nkxB4 B:1098-1223 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkxc1 c:16-118 Histone-like Histone-related Histone
e7nkxC2 C:4-41,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nkxC1 C:42-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7nkxd1 d:30-121 Histone-like Histone-related Histone
e7nkxD1 D:1-69,D:132-221 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7nkxe1 e:39-135 Histone-like Histone-related Histone
e7nkxE1 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7nkxE2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7nkxf1 f:25-102 Histone-like Histone-related Histone
e7nkxF1 F:69-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7nkxg1 g:16-108 Histone-like Histone-related Histone
e7nkxG1 G:1-80 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7nkxG2 G:81-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nkxh1 h:29-121 Histone-like Histone-related Histone
e7nkxH1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nkxI2 I:2-50 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkxI1 I:51-120 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkxJ1 J:1-65 HTH RPB10 RPB10
e7nkxK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nkxL1 L:27-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkxW3 W:175-260 SH3 Chromo domain-like Chromo domain-like
e7nkxW4 W:261-345 SH3 Chromo domain-like Chromo domain-like
e7nkxW2 W:346-606 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7nkxW1 W:607-841 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7nkxY1 Y:3-100 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkxZ1 Z:285-377 Alpha-beta plaits N-utilization substance G protein NusG, N-terminal domain N-utilization substance G protein NusG, N-terminal domain
e7nkxZ2 Z:798-860 SH3 SH3 SH3