Domain ID e7nkyA6

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  • A: a+b complex topology
  • X: N-terminal domain in RNA-polymerase beta-prime subunit
  • H: N-terminal domain in RNA-polymerase beta-prime subunit
  • T: N-terminal domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_1
UID: 002764442
Type: Automatic domain
Parent: e1twfA4
Range: A:3-336
Ligands: ZN
PDB: 7nky
PDB Description: DNA-directed RNA polymerase II subunit RPB1
Species:

Structure of domain e7nkyA6

Domains in the same chain:

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e7nkyA6 A:3-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nkyA4 A:337-374,A:436-519 cradle loop barrel RIFT-related double psi
e7nkyA5 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nkyA2 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nkyA1 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nkyA7 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nkyA8 A:1060-1102,A:1301-1454 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nkyA9 A:1103-1131,A:1243-1300 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkyA3 A:1132-1242 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7nkya1 a:45-132 Histone-like Histone-related Histone
e7nkyA6 A:3-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7nkyA4 A:337-374,A:436-519 cradle loop barrel RIFT-related double psi
e7nkyA5 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nkyA2 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7nkyA1 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7nkyA7 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nkyA8 A:1060-1102,A:1301-1454 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7nkyA9 A:1103-1131,A:1243-1300 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkyA3 A:1132-1242 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkyb1 b:20-102 Histone-like Histone-related Histone
e7nkyB1 B:20-70,B:90-134,B:164-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkyB5 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nkyB2 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7nkyB7 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nkyB6 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e7nkyB4 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7nkyB3 B:1098-1223 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkyc1 c:16-117 Histone-like Histone-related Histone
e7nkyC2 C:4-41,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nkyC1 C:42-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7nkyd1 d:28-122 Histone-like Histone-related Histone
e7nkyD1 D:1-71,D:131-221 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7nkye1 e:39-132 Histone-like Histone-related Histone
e7nkyE1 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7nkyE2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7nkyf1 f:25-102 Histone-like Histone-related Histone
e7nkyF1 F:69-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7nkyg1 g:14-110 Histone-like Histone-related Histone
e7nkyG1 G:1-80 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7nkyG2 G:81-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nkyh1 h:29-121 Histone-like Histone-related Histone
e7nkyH1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7nkyI2 I:2-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkyI1 I:50-120 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkyJ1 J:1-65 HTH RPB10 RPB10
e7nkyK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7nkyL1 L:27-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkyO2 O:2-111 PH domain-like PH domain-like PH domain-like
e7nkyO4 O:106-179 PH domain-like PH domain-like PH domain-like
e7nkyO1 O:226-372 PH domain-like PH domain-like PH domain-like
e7nkyO3 O:373-474 PH domain-like PH domain-like PH domain-like
e7nkyQ3 Q:536-652 PH domain-like PH domain-like PH domain-like
e7nkyQ1 Q:653-828 PH domain-like PH domain-like PH domain-like
e7nkyQ2 Q:829-968 PH domain-like PH domain-like PH domain-like
e7nkyY1 Y:3-100 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7nkyZ1 Z:285-377 Alpha-beta plaits N-utilization substance G protein NusG, N-terminal domain N-utilization substance G protein NusG, N-terminal domain
e7nkyZ2 Z:798-860 SH3 SH3 SH3