ECOD: domain e7nkyD1

Domain ID e7nkyD1

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: RNA_pol_Rpb4

UID:	002764467
Type:	Automatic domain
Parent:	e1go3F1
Range:	D:1-71,D:131-221
PDB:	7nky
PDB Description:	DNA-directed RNA polymerase II subunit RPB4
Species:

Domains in the same chain:

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e7nkyD1	D:1-71,D:131-221	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e7nkya1	a:45-132	Histone-like	Histone-related	Histone
e7nkyA6	A:3-336	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7nkyA4	A:337-374,A:436-519	cradle loop barrel	RIFT-related	double psi
e7nkyA5	A:375-435	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7nkyA2	A:520-662	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7nkyA1	A:663-871	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7nkyA7	A:872-1059	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7nkyA8	A:1060-1102,A:1301-1454	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7nkyA9	A:1103-1131,A:1243-1300	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkyA3	A:1132-1242	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7nkyb1	b:20-102	Histone-like	Histone-related	Histone
e7nkyB1	B:20-70,B:90-134,B:164-218,B:405-541	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkyB5	B:219-404	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7nkyB2	B:542-630	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7nkyB7	B:631-813	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7nkyB6	B:814-850,B:975-1097	cradle loop barrel	RIFT-related	double psi
e7nkyB4	B:851-974	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7nkyB3	B:1098-1223	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7nkyc1	c:16-117	Histone-like	Histone-related	Histone
e7nkyC2	C:4-41,C:173-268	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7nkyC1	C:42-172	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7nkyd1	d:28-122	Histone-like	Histone-related	Histone
e7nkyD1	D:1-71,D:131-221	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7nkye1	e:39-132	Histone-like	Histone-related	Histone
e7nkyE1	E:2-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e7nkyE2	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7nkyf1	f:25-102	Histone-like	Histone-related	Histone
e7nkyF1	F:69-155	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7nkyg1	g:14-110	Histone-like	Histone-related	Histone
e7nkyG1	G:1-80	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7nkyG2	G:81-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7nkyh1	h:29-121	Histone-like	Histone-related	Histone
e7nkyH1	H:2-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7nkyI2	I:2-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkyI1	I:50-120	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkyJ1	J:1-65	HTH	RPB10	RPB10
e7nkyK1	K:1-115	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7nkyL1	L:27-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkyO2	O:2-111	PH domain-like	PH domain-like	PH domain-like
e7nkyO4	O:106-179	PH domain-like	PH domain-like	PH domain-like
e7nkyO1	O:226-372	PH domain-like	PH domain-like	PH domain-like
e7nkyO3	O:373-474	PH domain-like	PH domain-like	PH domain-like
e7nkyQ3	Q:536-652	PH domain-like	PH domain-like	PH domain-like
e7nkyQ1	Q:653-828	PH domain-like	PH domain-like	PH domain-like
e7nkyQ2	Q:829-968	PH domain-like	PH domain-like	PH domain-like
e7nkyY1	Y:3-100	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7nkyZ1	Z:285-377	Alpha-beta plaits	N-utilization substance G protein NusG, N-terminal domain	N-utilization substance G protein NusG, N-terminal domain
e7nkyZ2	Z:798-860	SH3	SH3	SH3