ECOD: domain e7o72A8

Domain ID e7o72A8

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: double psi
F: RNA_pol_Rpb1_2

UID:	002765585
Type:	Automatic domain
Parent:	e1twfA1
Range:	A:337-374,A:436-519
Ligands:	MG
PDB:	7o72
PDB Description:	DNA-directed RNA polymerase II subunit RPB1
Species:

Domains in the same chain:

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e7o72A9	A:2-336	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7o72A8	A:337-374,A:436-519	cradle loop barrel	RIFT-related	double psi
e7o72A7	A:375-435	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7o72A4	A:520-662	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7o72A1	A:663-871	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7o72A5	A:872-1059	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7o72A3	A:1060-1102,A:1301-1454	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7o72A2	A:1103-1131,A:1243-1300	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7o72A6	A:1132-1242	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7o7202	0:1-244,0:446-502,0:724-752	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7o7203	0:245-445	XPD arch domain	XPD arch domain	XPD arch domain
e7o7201	0:503-723	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7o7232	3:9-79	RING/U-box-like	RING/U-box-like	RING/U-box
e7o7231	3:80-139	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e7o7242	4:21-285	HAD domain-like	HAD domain-related	vWA-like
e7o7241	4:286-328	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7o7251	5:2-66	TFB5-related	TFB5-related	TFB5-related
e7o7261	6:96-122,6:375-459	RING/U-box-like	RING/U-box-like	Cysteine-rich domain
e7o7263	6:123-307	HAD domain-like	HAD domain-related	vWA-like
e7o7262	6:308-374	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7o72A9	A:2-336	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7o72A8	A:337-374,A:436-519	cradle loop barrel	RIFT-related	double psi
e7o72A7	A:375-435	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7o72A4	A:520-662	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7o72A1	A:663-871	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7o72A5	A:872-1059	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7o72A3	A:1060-1102,A:1301-1454	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7o72A2	A:1103-1131,A:1243-1300	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7o72A6	A:1132-1242	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7o72B6	B:18-218,B:405-541	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7o72B5	B:219-404	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7o72B7	B:542-630	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7o72B2	B:631-813	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7o72B4	B:814-850,B:975-1097	cradle loop barrel	RIFT-related	double psi
e7o72B3	B:851-974	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7o72B1	B:1098-1224	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7o72C1	C:3-37,C:173-268	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7o72C2	C:38-172	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7o72D1	D:13-71,D:131-220	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7o72E1	E:2-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e7o72E2	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7o72F1	F:70-155	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7o72G1	G:1-80	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7o72G2	G:81-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7o72H1	H:2-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7o72I1	I:2-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7o72I2	I:50-117	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7o72J1	J:1-69	HTH	RPB10	RPB10
e7o72K1	K:1-115	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7o72L1	L:26-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7o72M3	M:14-68	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7o72M2	M:67-230	HTH	HTH	Cyclin-like
e7o72M1	M:231-342	HTH	HTH	Cyclin-like
e7o72O2	O:60-156	TBP-like	TATA-box binding protein-like	TATA-box binding protein-like
e7o72O1	O:157-240	TBP-like	TATA-box binding protein-like	TATA-box binding protein-like
e7o72U1	U:3-56	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain
e7o72U2	U:229-286	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain
e7o72V1	V:5-54	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain	TFIIA, alpha-helical domain
e7o72V2	V:55-122	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain	Transcription factor IIA (TFIIA), beta-barrel domain