Domain ID e7o72M3

Download files:
  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: TF_Zn_Ribbon
UID: 002756342
Type: Automatic domain
Parent: e1pftA1
Range: M:14-68
Ligands: ZN
PDB: 7o72
PDB Description: Transcription initiation factor IIB
Species:

Structure of domain e7o72M3

Domains in the same chain:

Download Pymol

e7o72M3 M:14-68 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o72M2 M:67-230 HTH HTH Cyclin-like
e7o72M1 M:231-342 HTH HTH Cyclin-like

Domains in the same PDB:

e7o7202 0:1-244,0:446-502,0:724-752 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7o7203 0:245-445 XPD arch domain XPD arch domain XPD arch domain
e7o7201 0:503-723 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7o7232 3:9-79 RING/U-box-like RING/U-box-like RING/U-box
e7o7231 3:80-139 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e7o7242 4:21-285 HAD domain-like HAD domain-related vWA-like
e7o7241 4:286-328 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o7251 5:2-66 TFB5-related TFB5-related TFB5-related
e7o7261 6:96-122,6:375-459 RING/U-box-like RING/U-box-like Cysteine-rich domain
e7o7263 6:123-307 HAD domain-like HAD domain-related vWA-like
e7o7262 6:308-374 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o72A9 A:2-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7o72A8 A:337-374,A:436-519 cradle loop barrel RIFT-related double psi
e7o72A7 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7o72A4 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7o72A1 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7o72A5 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7o72A3 A:1060-1102,A:1301-1454 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7o72A2 A:1103-1131,A:1243-1300 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7o72A6 A:1132-1242 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7o72B6 B:18-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7o72B5 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7o72B7 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7o72B2 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7o72B4 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e7o72B3 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7o72B1 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7o72C1 C:3-37,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7o72C2 C:38-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7o72D1 D:13-71,D:131-220 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7o72E1 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7o72E2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7o72F1 F:70-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7o72G1 G:1-80 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7o72G2 G:81-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7o72H1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7o72I1 I:2-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o72I2 I:50-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o72J1 J:1-69 HTH RPB10 RPB10
e7o72K1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7o72L1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o72M3 M:14-68 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7o72M2 M:67-230 HTH HTH Cyclin-like
e7o72M1 M:231-342 HTH HTH Cyclin-like
e7o72O2 O:60-156 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7o72O1 O:157-240 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7o72U1 U:3-56 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7o72U2 U:229-286 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7o72V1 V:5-54 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7o72V2 V:55-122 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain