Domain ID e7oopA5

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  • A: a+b complex topology
  • X: first helical domain in RNA-polymerase beta-prime subunit
  • H: first helical domain in RNA-polymerase beta-prime subunit
  • T: first helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_3
UID: 002820972
Type: Automatic domain
Parent: e1twfA6
Range: A:534-685
PDB: 7oop
PDB Description: DNA-directed RNA polymerase II subunit RPB1
Species:

Structure of domain e7oopA5

Domains in the same chain:

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e7oopA4 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7oopA1 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7oopA3 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7oopA5 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7oopA2 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7oopA7 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7oopA9 A:1083-1135,A:1361-1481 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7oopA8 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oopA6 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e7oopa1 a:1-365 beta-propeller-like beta-propeller 7-bladed
e7oopA4 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7oopA1 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7oopA3 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7oopA5 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7oopA2 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7oopA7 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7oopA9 A:1083-1135,A:1361-1481 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7oopA8 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oopA6 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oopb1 b:490-753 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7oopb2 b:754-1025,b:1383-1399 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7oopB1 B:15-199,B:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oopB5 B:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7oopB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7oopB4 B:619-767 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7oopB2 B:768-805,B:930-1055 cradle loop barrel RIFT-related double psi
e7oopB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7oopB3 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oopc1 c:3-143 Repetitive alpha hairpins ARM repeat ARM repeat
e7oopC2 C:2-42,C:179-270 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7oopC1 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7oopd1 d:1-355 beta-propeller-like beta-propeller 7-bladed
e7oopd2 d:356-394,d:685-1044 beta-propeller-like beta-propeller 7-bladed
e7oopd4 d:395-684 beta-propeller-like beta-propeller 7-bladed
e7oopd3 d:1045-1140 HTH HTH tri-helical
e7oopD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7oopE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7oopE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7oopF1 F:46-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7oopG2 G:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7oopG1 G:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oopH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oopI2 I:9-61 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oopI1 I:62-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oopJ1 J:1-67 HTH RPB10 RPB10
e7oopK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7oopL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oopM6 M:284-332,M:355-404 HTH Tex N-terminal domain Tex N-terminal domain
e7oopM3 M:405-475 immunoglobulin/albumin-binding domain-like Tex bundle domain-like Tex bundle domain-like
e7oopM1 M:515-756 Tex N-terminal region-like Tex N-terminal region-like Tex N-terminal region-like
e7oopM2 M:757-944 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e7oopM4 M:945-1042 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7oopM5 M:1043-1144 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7oopM7 M:1145-1175,M:1226-1287 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oopY1 Y:5-304 beta-propeller-like beta-propeller 8-bladed