ECOD: domain e7oopI2

Domain ID e7oopI2

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: RNA_POL_M_15KD

UID:	002801190
Type:	Automatic domain
Parent:	e1twfI1
Range:	I:9-61
Ligands:	ZN
PDB:	7oop
PDB Description:	DNA-directed RNA polymerase II subunit RPB9
Species:

Domains in the same chain:

Download Pymol

e7oopI2	I:9-61	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oopI1	I:62-125	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e7oopa1	a:1-365	beta-propeller-like	beta-propeller	7-bladed
e7oopA4	A:11-155,A:182-350	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7oopA1	A:351-388,A:450-533	cradle loop barrel	RIFT-related	double psi
e7oopA3	A:389-449	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7oopA5	A:534-685	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7oopA2	A:686-894	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7oopA7	A:895-1082	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7oopA9	A:1083-1135,A:1361-1481	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7oopA8	A:1136-1164,A:1298-1360	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oopA6	A:1165-1297	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oopb1	b:490-753	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7oopb2	b:754-1025,b:1383-1399	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e7oopB1	B:15-199,B:391-528	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oopB5	B:200-391	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7oopB6	B:529-618	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7oopB4	B:619-767	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7oopB2	B:768-805,B:930-1055	cradle loop barrel	RIFT-related	double psi
e7oopB7	B:806-929	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7oopB3	B:1054-1174	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oopc1	c:3-143	Repetitive alpha hairpins	ARM repeat	ARM repeat
e7oopC2	C:2-42,C:179-270	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7oopC1	C:43-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7oopd1	d:1-355	beta-propeller-like	beta-propeller	7-bladed
e7oopd2	d:356-394,d:685-1044	beta-propeller-like	beta-propeller	7-bladed
e7oopd4	d:395-684	beta-propeller-like	beta-propeller	7-bladed
e7oopd3	d:1045-1140	HTH	HTH	tri-helical
e7oopD1	D:14-141	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7oopE1	E:2-138	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e7oopE2	E:139-210	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7oopF1	F:46-127	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7oopG2	G:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7oopG1	G:79-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7oopH1	H:2-149	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7oopI2	I:9-61	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oopI1	I:62-125	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oopJ1	J:1-67	HTH	RPB10	RPB10
e7oopK1	K:1-115	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7oopL1	L:13-58	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oopM6	M:284-332,M:355-404	HTH	Tex N-terminal domain	Tex N-terminal domain
e7oopM3	M:405-475	immunoglobulin/albumin-binding domain-like	Tex bundle domain-like	Tex bundle domain-like
e7oopM1	M:515-756	Tex N-terminal region-like	Tex N-terminal region-like	Tex N-terminal region-like
e7oopM2	M:757-944	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e7oopM4	M:945-1042	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7oopM5	M:1043-1144	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7oopM7	M:1145-1175,M:1226-1287	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7oopY1	Y:5-304	beta-propeller-like	beta-propeller	8-bladed