Citrus Sinensis ID: 047474

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MSINSQNDEGSSTSTPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYILGT
cccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEEEHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccEEEEEHHcccccccEEEEEEcccccccccccHHHHHHHHHHHcccccc
cccccccccccccccccccHHHHHHHHHHccHHHccHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEcHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHcEEEEEcHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccccEEEEcccHHHHHHHHHHHcccccccccccHHHHHHEEEccccccEEEEcccHccccEEEccHHHHHHHHHHHcccccc
msinsqndegsststpqmsvEEKFRLVRSIGEECIQEDELLnlltkkpqpicydgfepsgrmHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNkmggdlkkIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADIcqlgmdqrKVNVLAREYCDdikrknkpiilshhmlpglqqgqekmsksdpssaiymedeEAEVNVKIKkaycppkivegnpcleYIKYiifpwdkkfvverseanggnktFETMKNLLLIMKKEIYILGT
msinsqndegsststpqmsveEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNkmggdlkkiqTVGRYLIEIWIAVGMRTERVEFLWSSEEinaradeywplVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVErseanggnktfetmknlllimkkeiyilgt
MSINSQNDEGSSTSTPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYILGT
***********************FRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHM***************************EVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYIL**
***********************FRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPR******************AQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHH**********************MEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYIL**
******************SVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGL**************AIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYILGT
****************QMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQ*****SKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYI***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSINSQNDEGSSTSTPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEIYILGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
Q5UPJ7346 Tyrosine--tRNA ligase OS= N/A no 0.837 0.789 0.473 1e-67
Q6L2J1329 Tyrosine--tRNA ligase OS= yes no 0.834 0.826 0.385 4e-52
C6A0Z6375 Tyrosine--tRNA ligase OS= yes no 0.901 0.784 0.363 1e-50
Q8U2H3375 Tyrosine--tRNA ligase OS= yes no 0.901 0.784 0.336 9e-50
O58739375 Tyrosine--tRNA ligase OS= yes no 0.901 0.784 0.348 2e-49
Q4JCH6361 Tyrosine--tRNA ligase OS= yes no 0.901 0.814 0.364 1e-48
Q9V027375 Tyrosine--tRNA ligase OS= yes no 0.901 0.784 0.342 2e-48
Q9YA64364 Tyrosine--tRNA ligase OS= yes no 0.898 0.804 0.366 2e-48
Q96YV3364 Tyrosine--tRNA ligase OS= yes no 0.895 0.802 0.369 6e-48
C3MYZ9361 Tyrosine--tRNA ligase OS= yes no 0.889 0.803 0.358 2e-47
>sp|Q5UPJ7|SYY_MIMIV Tyrosine--tRNA ligase OS=Acanthamoeba polyphaga mimivirus GN=YARS PE=1 SV=1 Back     alignment and function desciption
 Score =  256 bits (655), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/279 (47%), Positives = 180/279 (64%), Gaps = 6/279 (2%)

Query: 14  STPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAIS 73
           +T   + E +   + SI EEC   D L  L+        Y+GFEPSGR+HIAQ ++  ++
Sbjct: 3   NTDHTNNEHRLTQLLSIAEECETLDRLKQLVDSGRIFTAYNGFEPSGRIHIAQALITVMN 62

Query: 74  VNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSS 133
            N +   G ++ I++ADWFA++N KM GD+ KI+ +GRY IE++ A G+  +   F+W+S
Sbjct: 63  TNNIIECGGQMIIYIADWFAKMNLKMNGDINKIRELGRYFIEVFKACGINLDGTRFIWAS 122

Query: 134 EEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFL- 192
           E I A    Y   ++DIA  + + R+ RCCQIMGR+E D L A+QI YPCMQ AD+F L 
Sbjct: 123 EFI-ASNPSYIERMLDIAEFSTISRVKRCCQIMGRNESDCLKASQIFYPCMQAADVFELV 181

Query: 193 --KADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAI 250
               DICQLG+DQRKVN+LA EY +D   K  PI LSHHML  L   ++KMSKSDP  AI
Sbjct: 182 PEGIDICQLGIDQRKVNMLAIEYANDRGLK-IPISLSHHMLMSLSGPKKKMSKSDPQGAI 240

Query: 251 YMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPW 289
           +M+D E EV+ KI +AYC  +  + NP  EYIKY++  W
Sbjct: 241 FMDDTEQEVSEKISRAYCTDETFD-NPIFEYIKYLLLRW 278
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
Acanthamoeba polyphaga (taxid: 5757)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1
>sp|Q6L2J1|SYY_PICTO Tyrosine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=tyrS PE=3 SV=1 Back     alignment and function description
>sp|C6A0Z6|SYY_THESM Tyrosine--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tyrS PE=3 SV=1 Back     alignment and function description
>sp|Q8U2H3|SYY_PYRFU Tyrosine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=tyrS PE=3 SV=1 Back     alignment and function description
>sp|O58739|SYY_PYRHO Tyrosine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=tyrS PE=1 SV=1 Back     alignment and function description
>sp|Q4JCH6|SYY_SULAC Tyrosine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=tyrS PE=3 SV=1 Back     alignment and function description
>sp|Q9V027|SYY_PYRAB Tyrosine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=tyrS PE=3 SV=1 Back     alignment and function description
>sp|Q9YA64|SYY_AERPE Tyrosine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=tyrS PE=1 SV=1 Back     alignment and function description
>sp|Q96YV3|SYY_SULTO Tyrosine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=tyrS PE=3 SV=3 Back     alignment and function description
>sp|C3MYZ9|SYY_SULIM Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=tyrS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
147815112385 hypothetical protein VITISV_000951 [Viti 0.963 0.815 0.821 1e-155
225426426385 PREDICTED: tyrosyl-tRNA synthetase [Viti 0.963 0.815 0.818 1e-154
1841468408 Tyrosyl-tRNA synthetase [Nicotiana tabac 0.911 0.727 0.832 1e-152
449452314387 PREDICTED: tyrosine--tRNA ligase-like [C 0.901 0.759 0.858 1e-152
356496773381 PREDICTED: tyrosyl-tRNA synthetase-like 0.960 0.821 0.807 1e-152
255552884413 tyrosyl-tRNA synthetase, putative [Ricin 0.911 0.719 0.852 1e-152
449495793387 PREDICTED: LOW QUALITY PROTEIN: tyrosine 0.901 0.759 0.854 1e-151
363807209380 uncharacterized protein LOC100812345 [Gl 0.975 0.836 0.788 1e-151
224110028345 predicted protein [Populus trichocarpa] 0.911 0.860 0.836 1e-148
224097478352 predicted protein [Populus trichocarpa] 0.911 0.843 0.836 1e-147
>gi|147815112|emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/319 (82%), Positives = 290/319 (90%), Gaps = 5/319 (1%)

Query: 1   MSIN-SQNDEGSSTS--TPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFE 57
           +S+N SQN + +S+S   P M++EEKFR+VRS+GEECIQEDEL+NLL  KP+PICYDGFE
Sbjct: 15  LSVNXSQNHDSASSSNPAPAMTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFE 74

Query: 58  PSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIW 117
           PSGRMHIAQGVMK ISVNKLTSAGC+VKIW+ADWFAQLNNKMGGDLKKI+TVGRYLIEIW
Sbjct: 75  PSGRMHIAQGVMKTISVNKLTSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIW 134

Query: 118 IAVGMRTE--RVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELT 175
            AVGM  +  +VEFLWSS+EINARA EYWP VMDIARRNKLPRIMRC QIMGRSEQ+EL+
Sbjct: 135 KAVGMDLDGGKVEFLWSSKEINARAHEYWPRVMDIARRNKLPRIMRCVQIMGRSEQEELS 194

Query: 176 AAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQ 235
           AAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIK KNKPIILSHHMLPGLQ
Sbjct: 195 AAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQ 254

Query: 236 QGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVV 295
           QGQEKMSKSDPSS+I+MEDEEAEVNVKIKKAYCPPK+VEGNPCLEY+ YIIFPW  +F V
Sbjct: 255 QGQEKMSKSDPSSSIFMEDEEAEVNVKIKKAYCPPKVVEGNPCLEYVNYIIFPWFNEFKV 314

Query: 296 ERSEANGGNKTFETMKNLL 314
           ER   NGG+K F++ K L+
Sbjct: 315 ERKAENGGDKIFKSYKELI 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426426|ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vinifera] gi|297742518|emb|CBI34667.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|1841468|emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|449452314|ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356496773|ref|XP_003517240.1| PREDICTED: tyrosyl-tRNA synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|255552884|ref|XP_002517485.1| tyrosyl-tRNA synthetase, putative [Ricinus communis] gi|223543496|gb|EEF45027.1| tyrosyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449495793|ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|363807209|ref|NP_001242097.1| uncharacterized protein LOC100812345 [Glycine max] gi|255636795|gb|ACU18731.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224110028|ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|222864431|gb|EEF01562.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224097478|ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|222850772|gb|EEE88319.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
TAIR|locus:2057599385 AT2G33840 [Arabidopsis thalian 0.947 0.802 0.790 6.7e-136
DICTYBASE|DDB_G0276721383 tyrS "tyrosyl-tRNA synthetase" 0.892 0.759 0.627 7.9e-101
UNIPROTKB|Q5ZJ08 527 YARS "Tyrosine--tRNA ligase, c 0.861 0.533 0.306 2e-27
UNIPROTKB|F1NJU7 526 YARS "Tyrosine--tRNA ligase, c 0.855 0.530 0.315 3.3e-27
UNIPROTKB|E2RHR7 564 YARS "Uncharacterized protein" 0.907 0.524 0.302 7.4e-27
UNIPROTKB|I3L5T8 528 YARS "Uncharacterized protein" 0.868 0.535 0.302 3.3e-26
RGD|1307616 528 Yars "tyrosyl-tRNA synthetase" 0.865 0.534 0.306 3.3e-26
UNIPROTKB|Q4KM49 528 Yars "Tyrosine--tRNA ligase, c 0.865 0.534 0.306 3.3e-26
UNIPROTKB|P54577 528 YARS "Tyrosine--tRNA ligase, c 0.865 0.534 0.310 4.3e-26
MGI|MGI:2147627 528 Yars "tyrosyl-tRNA synthetase" 0.846 0.522 0.309 5.6e-26
TAIR|locus:2057599 AT2G33840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
 Identities = 246/311 (79%), Positives = 278/311 (89%)

Query:     5 SQNDEGSSTSTPQMS--VEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRM 62
             S     SS+   QMS  VE+++++VRSIGEECIQE+EL NLL KK  PICYDGFEPSGRM
Sbjct:    22 SSTQASSSSDGFQMSEEVEKRYKIVRSIGEECIQEEELKNLLAKKAAPICYDGFEPSGRM 81

Query:    63 HIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGM 122
             HIAQGVMK I+VNK+TSAGC+VKIW+ADWFAQLNNKMGGDLKKI+ VG Y  EIW A GM
Sbjct:    82 HIAQGVMKVINVNKMTSAGCRVKIWIADWFAQLNNKMGGDLKKIRVVGEYFQEIWKAAGM 141

Query:   123 RTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYP 182
               ++VEFLWSSEEIN++AD+YWPLVMDIAR+NKLPRI+RC QIMGRSE DEL+AAQILYP
Sbjct:   142 DNDKVEFLWSSEEINSKADKYWPLVMDIARKNKLPRILRCVQIMGRSETDELSAAQILYP 201

Query:   183 CMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMS 242
             CMQCADIFFL+ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMS
Sbjct:   202 CMQCADIFFLEADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMS 261

Query:   243 KSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANG 302
             KSDP SAI+MEDEEAEVNVKIKKAYCPPK+V+GNPCLEYIKYII PW  +F VER+E  G
Sbjct:   262 KSDPLSAIFMEDEEAEVNVKIKKAYCPPKVVKGNPCLEYIKYIILPWFDEFTVERNEEYG 321

Query:   303 GNKTFETMKNL 313
             GNKT+++ +++
Sbjct:   322 GNKTYKSFEDI 332
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS
GO:0004831 "tyrosine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS
GO:0006437 "tyrosyl-tRNA aminoacylation" evidence=IEA
DICTYBASE|DDB_G0276721 tyrS "tyrosyl-tRNA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZJ08 YARS "Tyrosine--tRNA ligase, cytoplasmic" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJU7 YARS "Tyrosine--tRNA ligase, cytoplasmic" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RHR7 YARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3L5T8 YARS "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1307616 Yars "tyrosyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KM49 Yars "Tyrosine--tRNA ligase, cytoplasmic" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P54577 YARS "Tyrosine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2147627 Yars "tyrosyl-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q46BQ5SYY_METBF6, ., 1, ., 1, ., 10.35230.84960.8738yesno
Q6L2J1SYY_PICTO6, ., 1, ., 1, ., 10.38590.83430.8267yesno
Q57834SYY_METJA6, ., 1, ., 1, ., 10.32890.85580.9117yesno
C3MJP1SYY_SULIL6, ., 1, ., 1, ., 10.35870.88950.8033yesno
O29482SYY_ARCFU6, ., 1, ., 1, ., 10.36480.87730.8854yesno
Q96YV3SYY_SULTO6, ., 1, ., 1, ., 10.36970.89570.8021yesno
C3NMQ6SYY_SULIN6, ., 1, ., 1, ., 10.35550.88950.8033yesno
Q8TSI1SYY_METAC6, ., 1, ., 1, ., 10.34240.84040.8643yesno
Q2FNA1SYY_METHJ6, ., 1, ., 1, ., 10.34610.81280.8466yesno
C3N048SYY_SULIA6, ., 1, ., 1, ., 10.35870.88950.8033yesno
A5UKJ0SYY_METS36, ., 1, ., 1, ., 10.35730.83430.8526yesno
Q8PVK0SYY_METMA6, ., 1, ., 1, ., 10.34930.84040.8643yesno
Q12W06SYY_METBU6, ., 1, ., 1, ., 10.33910.82820.8517yesno
Q4JCH6SYY_SULAC6, ., 1, ., 1, ., 10.36470.90180.8144yesno
Q6M0K7SYY_METMP6, ., 1, ., 1, ., 10.34850.80360.8213yesno
Q5V4J1SYY_HALMA6, ., 1, ., 1, ., 10.34760.86190.8121yesno
Q8TXZ2SYY_METKA6, ., 1, ., 1, ., 10.35010.87730.8827yesno
Q3IQU8SYY_NATPD6, ., 1, ., 1, ., 10.32360.86800.8202yesno
C3MYZ9SYY_SULIM6, ., 1, ., 1, ., 10.35870.88950.8033yesno
A6URQ1SYY_METVS6, ., 1, ., 1, ., 10.32640.82820.8463yesno
A2SU89SYY_METLZ6, ., 1, ., 1, ., 10.32200.84350.8675yesno
Q9YA64SYY_AERPE6, ., 1, ., 1, ., 10.36620.89870.8049yesno
C4KJ87SYY_SULIK6, ., 1, ., 1, ., 10.35870.88950.8033yesno
C3N8R2SYY_SULIY6, ., 1, ., 1, ., 10.35870.88950.8033yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.10.824
3rd Layer6.1.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00000425001
SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (370 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00036385001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (489 aa)
•  •  • 0.898
GSVIVG00017573001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (592 aa)
•  •  • 0.891
GSVIVG00002216001
SubName- Full=Chromosome chr14 scaffold_128, whole genome shotgun sequence; (485 aa)
    ••• 0.875
GSVIVG00018613001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (399 aa)
   •  • 0.867
GSVIVG00028238001
SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (516 aa)
   •  • 0.837
GSVIVG00001918001
SubName- Full=Chromosome chr5 scaffold_124, whole genome shotgun sequence; (1153 aa)
   •  • 0.836
GSVIVG00022843001
SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (447 aa)
   •  • 0.826
GSVIVG00034896001
SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (407 aa)
   •  • 0.798
GSVIVG00024178001
RecName- Full=Proliferating cell nuclear antigen;; This protein is an auxiliary protein of DNA [...] (266 aa)
      • 0.797
GSVIVG00037704001
SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (529 aa)
   •  • 0.790

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
PTZ00126383 PTZ00126, PTZ00126, tyrosyl-tRNA synthetase; Provi 0.0
PTZ00348 682 PTZ00348, PTZ00348, tyrosyl-tRNA synthetase; Provi 1e-147
PRK08560329 PRK08560, PRK08560, tyrosyl-tRNA synthetase; Valid 1e-99
pfam00579291 pfam00579, tRNA-synt_1b, tRNA synthetases class I 1e-64
COG0162401 COG0162, TyrS, Tyrosyl-tRNA synthetase [Translatio 8e-38
cd00805269 cd00805, TyrRS_core, catalytic core domain of tyro 2e-31
cd00806280 cd00806, TrpRS_core, catalytic core domain of tryp 3e-23
COG0180314 COG0180, TrpS, Tryptophanyl-tRNA synthetase [Trans 8e-19
TIGR00233327 TIGR00233, trpS, tryptophanyl-tRNA synthetase 2e-18
PRK12285368 PRK12285, PRK12285, tryptophanyl-tRNA synthetase; 3e-15
TIGR00234377 TIGR00234, tyrS, tyrosyl-tRNA synthetase 3e-15
PTZ00348682 PTZ00348, PTZ00348, tyrosyl-tRNA synthetase; Provi 9e-15
PRK12282333 PRK12282, PRK12282, tryptophanyl-tRNA synthetase I 5e-12
PRK00927333 PRK00927, PRK00927, tryptophanyl-tRNA synthetase; 2e-09
PLN02486383 PLN02486, PLN02486, aminoacyl-tRNA ligase 3e-06
PLN02886389 PLN02886, PLN02886, aminoacyl-tRNA ligase 7e-05
>gnl|CDD|240282 PTZ00126, PTZ00126, tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information 
 Score =  544 bits (1403), Expect = 0.0
 Identities = 207/308 (67%), Positives = 236/308 (76%), Gaps = 2/308 (0%)

Query: 8   DEGSSTSTPQM--SVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIA 65
           + G   S PQ   S+EE+ +L  SIGEECIQ +EL  LL  K +PICYDGFEPSGRMHIA
Sbjct: 23  ETGFRGSPPQSKLSLEERVKLCLSIGEECIQPEELRELLKLKERPICYDGFEPSGRMHIA 82

Query: 66  QGVMKAISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTE 125
           QG++KAI+VNKLT AGC    WVADWFA LNNKMGGDL+KI+ VG Y IE+W A GM  +
Sbjct: 83  QGILKAINVNKLTKAGCVFVFWVADWFALLNNKMGGDLEKIRKVGEYFIEVWKAAGMDMD 142

Query: 126 RVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQ 185
            V FLW+SEEIN   ++YW  VMDIAR   + RI RC QIMGRSE DE   AQILYPCMQ
Sbjct: 143 NVRFLWASEEINKNPNDYWLRVMDIARSFNITRIKRCSQIMGRSEGDEQPCAQILYPCMQ 202

Query: 186 CADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSD 245
           CADIF+LKADICQLGMDQRKVN+LAREYCD  K K KPIILSHHMLPGL +GQEKMSKSD
Sbjct: 203 CADIFYLKADICQLGMDQRKVNMLAREYCDKKKIKKKPIILSHHMLPGLLEGQEKMSKSD 262

Query: 246 PSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNK 305
           P+SAI+MED E +VN KIKKAYCPP ++EGNP L Y K I+FP    F V R E NGG+ 
Sbjct: 263 PNSAIFMEDSEEDVNRKIKKAYCPPGVIEGNPILAYFKSIVFPAFNSFTVLRKEKNGGDV 322

Query: 306 TFETMKNL 313
           T+ T + L
Sbjct: 323 TYTTYEEL 330

Length = 383
>gnl|CDD|173541 PTZ00348, PTZ00348, tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236286 PRK08560, PRK08560, tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|216003 pfam00579, tRNA-synt_1b, tRNA synthetases class I (W and Y) Back     alignment and domain information
>gnl|CDD|223240 COG0162, TyrS, Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173902 cd00805, TyrRS_core, catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173903 cd00806, TrpRS_core, catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223258 COG0180, TrpS, Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232888 TIGR00233, trpS, tryptophanyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237037 PRK12285, PRK12285, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232889 TIGR00234, tyrS, tyrosyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173541 PTZ00348, PTZ00348, tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|183400 PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>gnl|CDD|234866 PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|178104 PLN02486, PLN02486, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|215478 PLN02886, PLN02886, aminoacyl-tRNA ligase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 100.0
PRK08560329 tyrosyl-tRNA synthetase; Validated 100.0
KOG2144360 consensus Tyrosyl-tRNA synthetase, cytoplasmic [Tr 100.0
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 100.0
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 100.0
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 100.0
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 100.0
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 100.0
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 100.0
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 100.0
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 100.0
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 100.0
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 100.0
PRK12284 431 tryptophanyl-tRNA synthetase; Reviewed 100.0
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 100.0
PRK05912408 tyrosyl-tRNA synthetase; Validated 100.0
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 100.0
PLN02886389 aminoacyl-tRNA ligase 100.0
PTZ00348682 tyrosyl-tRNA synthetase; Provisional 100.0
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 100.0
PLN02486383 aminoacyl-tRNA ligase 100.0
PRK13354410 tyrosyl-tRNA synthetase; Provisional 100.0
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 100.0
KOG2713347 consensus Mitochondrial tryptophanyl-tRNA syntheta 100.0
KOG2145397 consensus Cytoplasmic tryptophanyl-tRNA synthetase 100.0
KOG2623 467 consensus Tyrosyl-tRNA synthetase [Translation, ri 100.0
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.6
cd00808239 GluRS_core catalytic core domain of discriminating 99.49
PRK00750 510 lysK lysyl-tRNA synthetase; Reviewed 99.32
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 99.1
cd00674353 LysRS_core_class_I catalytic core domain of class 98.99
TIGR00467 515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 98.61
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.52
PRK04156 567 gltX glutamyl-tRNA synthetase; Provisional 98.27
COG1384 521 LysS Lysyl-tRNA synthetase (class I) [Translation, 98.1
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 98.1
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 98.03
PRK14895 513 gltX glutamyl-tRNA synthetase; Provisional 97.97
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 97.97
cd09287240 GluRS_non_core catalytic core domain of non-discri 97.97
PRK00260 463 cysS cysteinyl-tRNA synthetase; Validated 97.9
PRK01406 476 gltX glutamyl-tRNA synthetase; Reviewed 97.9
TIGR00464 470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 97.88
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 97.76
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 97.73
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 97.68
TIGR00435 465 cysS cysteinyl-tRNA synthetase. This model finds t 97.52
PRK12410 433 glutamylglutaminyl-tRNA synthetase; Provisional 97.51
PLN02627 535 glutamyl-tRNA synthetase 97.29
PRK12558 445 glutamyl-tRNA synthetase; Provisional 97.22
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 97.14
COG0008 472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 97.01
PLN03233 523 putative glutamate-tRNA ligase; Provisional 96.98
PLN02859 788 glutamine-tRNA ligase 96.85
PRK14536 490 cysS cysteinyl-tRNA synthetase; Provisional 96.83
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 96.8
PTZ00402 601 glutamyl-tRNA synthetase; Provisional 96.76
PRK14535 699 cysS cysteinyl-tRNA synthetase; Provisional 96.53
PLN02907 722 glutamate-tRNA ligase 96.39
PLN02946 557 cysteine-tRNA ligase 96.37
PRK05347 554 glutaminyl-tRNA synthetase; Provisional 96.28
TIGR00440 522 glnS glutaminyl-tRNA synthetase. This protein is a 96.03
TIGR00463 560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 95.91
PRK14534 481 cysS cysteinyl-tRNA synthetase; Provisional 95.82
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 95.74
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 94.41
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 94.4
PTZ00437 574 glutaminyl-tRNA synthetase; Provisional 94.22
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 94.05
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 93.73
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 93.72
COG0143 558 MetG Methionyl-tRNA synthetase [Translation, ribos 93.67
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 93.63
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 93.26
PF09334 391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 93.2
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 92.77
PRK11893 511 methionyl-tRNA synthetase; Reviewed 92.76
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 92.31
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 91.65
PLN02843 974 isoleucyl-tRNA synthetase 91.32
PRK12268 556 methionyl-tRNA synthetase; Reviewed 91.22
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 91.18
PLN02224 616 methionine-tRNA ligase 90.7
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 90.57
PRK12418384 cysteinyl-tRNA synthetase; Provisional 90.55
COG0215 464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 90.42
PLN02959 1084 aminoacyl-tRNA ligase 90.3
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 90.23
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 90.18
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 89.95
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 89.71
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 89.28
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 89.0
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 88.92
TIGR00398 530 metG methionyl-tRNA synthetase. The methionyl-tRNA 88.63
PLN02943 958 aminoacyl-tRNA ligase 88.54
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 88.36
PLN02610 801 probable methionyl-tRNA synthetase 88.08
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 87.93
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 87.9
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 87.87
PLN02381 1066 valyl-tRNA synthetase 87.86
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 87.73
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 87.69
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 87.47
KOG1147 712 consensus Glutamyl-tRNA synthetase [Translation, r 87.08
KOG1148 764 consensus Glutaminyl-tRNA synthetase [Translation, 87.0
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 86.99
PLN02286 576 arginine-tRNA ligase 86.53
PRK11893 511 methionyl-tRNA synthetase; Reviewed 86.51
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 86.43
PLN02563 963 aminoacyl-tRNA ligase 86.34
TIGR00456 566 argS arginyl-tRNA synthetase. This model recognize 85.68
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 85.48
PLN02882 1159 aminoacyl-tRNA ligase 85.47
PRK12267 648 methionyl-tRNA synthetase; Reviewed 84.74
PRK12268 556 methionyl-tRNA synthetase; Reviewed 84.17
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 84.14
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 83.41
PRK12267 648 methionyl-tRNA synthetase; Reviewed 83.29
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 82.19
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 82.05
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 81.47
PLN02224 616 methionine-tRNA ligase 80.16
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-83  Score=623.64  Aligned_cols=308  Identities=66%  Similarity=1.102  Sum_probs=293.1

Q ss_pred             CCCCCCHHHHHHHHHhhcccccCHHHHHHHHhcCCCCeEEEcccCCCCccchhhhhHHHHHHHHHHCCCeEEEEEeccee
Q 047474           14 STPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFA   93 (326)
Q Consensus        14 ~~~~~~~~~~~~li~r~~~e~~~~~eL~~lL~~~~~~~iy~G~~PTG~lHLG~~~~~~~~~~~lq~aG~~v~ilIaD~~a   93 (326)
                      +++.|+++||+++|+|+++|+++++||+++|++++++++|+|++|||++||||+++.+++|++||++||+++++||||||
T Consensus        31 ~~~~~~~~e~~~~i~r~~~e~i~~eel~~~l~~~~~~~v~~G~~PTG~lHLG~g~i~~~~~~~lq~~G~~v~~~IaD~hA  110 (383)
T PTZ00126         31 PQSKLSLEERVKLCLSIGEECIQPEELRELLKLKERPICYDGFEPSGRMHIAQGILKAINVNKLTKAGCVFVFWVADWFA  110 (383)
T ss_pred             CCCCCCHHHHHHHHhcCceeecCHHHHHHHHhcCCCCEEEEEECCCCcccccchHhHhHHHHHHHhCCCeEEEEEcccee
Confidence            45679999999999999999999999999998776788999999999999999877766899999999999999999999


Q ss_pred             eecCCCCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEeCChhHHhhhhhhHHHHHHhhhccCHHHHHhhhhhhcccccCc
Q 047474           94 QLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDE  173 (326)
Q Consensus        94 ~~~~~~~~~~~~i~~~~~~~~~~~~A~G~d~~k~~~~~~Sd~~~~~~~~~~~~~~~i~~~~tl~~~~~~~~~~~r~~~~~  173 (326)
                      +++|++|+++++++++++|++++|+|+|+||+|++||+||+|+++|+.+||.+++++++++++++|+|+.++++|.+.+.
T Consensus       111 ~~~~~~g~~l~~i~~~~~~~~~~~~A~GlDp~k~~i~~qS~~v~~~~~l~w~~~~~la~~~tl~r~~r~~~~~~r~~~~~  190 (383)
T PTZ00126        111 LLNNKMGGDLEKIRKVGEYFIEVWKAAGMDMDNVRFLWASEEINKNPNDYWLRVMDIARSFNITRIKRCSQIMGRSEGDE  190 (383)
T ss_pred             ecCCCCCCCHHHHHHHHHHHHHHHHHhCCCccceEEEECChhhhhhhHHHHHHHHHHhccCCHHHHHhhhhhhccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999876566


Q ss_pred             cchhhhhhhhhhhhhhccccCcEEEeccchhHHHHHHHHHHHHhcCcCCcceeecCcccCCCCCCccccCCCCCCceecC
Q 047474          174 LTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYME  253 (326)
Q Consensus       174 ~~~~~~~YP~lQaaD~~~l~~d~~~~G~DQ~~~~~lar~~~~k~~~~~~p~~l~~~~lp~L~~g~~KMSKS~~~s~I~L~  253 (326)
                      .++|+|+||+|||||++++++|++|||.||++|++||||+++++|+.++|+++++|+||||++|++|||||+++++|||+
T Consensus       191 ~~~g~l~YP~LQaaDil~l~adivpvG~DQ~~~~~LaRdia~~~~~~~~~~~~~~~~lpgL~dg~~KMSKS~~ns~I~L~  270 (383)
T PTZ00126        191 QPCAQILYPCMQCADIFYLKADICQLGMDQRKVNMLAREYCDKKKIKKKPIILSHHMLPGLLEGQEKMSKSDPNSAIFME  270 (383)
T ss_pred             CCchhhhhhHHHhhhhhccCCCEEEeCccHHHHHHHHHHHHHHhCCCCCceeecccccccCCCCCCCCCcCCCCCeecCC
Confidence            78999999999999999999999999999999999999999999976788999999999998787899999998899999


Q ss_pred             CCHHHHHHHHHhccCCCCCCCCCcHHHHHHHhccCCCCceeEeecccCCCCceecCHHHHHHHHHhhh
Q 047474          254 DEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEI  321 (326)
Q Consensus       254 D~~~~i~~KI~kA~c~~~~~~~n~vl~~~~~~ifp~~~~~~i~r~~~~gg~~~y~~~eel~~~~~~~~  321 (326)
                      |+|++|++||++|||+|+++++||+++|+++++||+.+.|.|+|++++||+++|.++|||+++|.+.-
T Consensus       271 Dspe~I~kKI~kA~t~p~~~~~npv~~~~~~~~~~~~~~~~I~r~~k~gg~~~~~~~eel~~~y~~g~  338 (383)
T PTZ00126        271 DSEEDVNRKIKKAYCPPGVIEGNPILAYFKSIVFPAFNSFTVLRKEKNGGDVTYTTYEELEKDYLSGA  338 (383)
T ss_pred             CCHHHHHHHHHhCcCCCCCCCCCcchhhhhhcccccccceeEeccccccCccCcCCHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999998754

>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>KOG2144 consensus Tyrosyl-tRNA synthetase, cytoplasmic [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02886 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG2713 consensus Mitochondrial tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2145 consensus Cytoplasmic tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2623 consensus Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
3vgj_A373 Crystal Of Plasmodium Falciparum Tyrosyl-Trna Synth 1e-107
3p0j_A 690 Leishmania Major Tyrosyl-Trna Synthetase In Complex 1e-104
3p0j_A690 Leishmania Major Tyrosyl-Trna Synthetase In Complex 2e-12
3p0h_A 690 Leishmania Major Tyrosyl-Trna Synthetase In Complex 4e-98
3p0h_A690 Leishmania Major Tyrosyl-Trna Synthetase In Complex 1e-11
2j5b_A348 Structure Of The Tyrosyl Trna Synthetase From Acant 9e-69
2cyc_A375 Crystal Structure Of Tyrosyl-Trna Synthetase Comple 2e-50
2cya_A364 Crystal Structure Of Tyrosyl-Trna Synthetase From A 1e-49
2cyb_A323 Crystal Structure Of Tyrosyl-Trna Synthetase Comple 1e-40
1j1u_A306 Crystal Structure Of Archaeal Tyrosyl-Trna Syntheta 6e-35
2zp1_A314 Structual Basis Of Iodo-Tyrosine Recognition By Eng 4e-33
3n2y_A314 Crystal Structure Of Tyrosyl-Trna Synthetase Comple 1e-32
3qe4_A312 An Evolved Aminoacyl-Trna Synthetase With Atypical 5e-32
3d6u_A314 Crystal Structure Of 4-(Trifluoromethyldiazirinyl) 6e-32
1u7x_A312 Crystal Structure Of A Mutant M. Jannashii Tyrosyl- 1e-31
2ag6_A314 Crystal Structure Of P-Bromo-L-Phenylalanine-Trna S 2e-31
1zh6_A314 Crystal Structure Of P-Acetylphenylalanine-Trna Syn 2e-31
2hgz_A306 Crystal Structure Of A P-Benzoyl-L-Phenylalanyl-Trn 4e-31
1zh0_A314 Crystal Structure Of L-3-(2-Napthyl)alanine-Trna Sy 4e-31
2pxh_A314 Crystal Structure Of A Bipyridylalanyl-Trna Synthet 6e-31
2dlc_X394 Crystal Structure Of The Ternary Complex Of Yeast T 2e-22
1n3l_A372 Crystal Structure Of A Human Aminoacyl-Trna Synthet 1e-20
2g36_A340 Crystal Structure Of Tryptophanyl-Trna Synthetase ( 3e-10
3prh_A388 Tryptophanyl-Trna Synthetase Val144pro Mutant From 5e-07
3a04_A372 Crystal Structure Of Tryptophanyl-Trna Synthetase F 1e-06
3fhj_B292 Independent Saturation Of Three Trprs Subsites Gene 3e-06
1i6m_A328 1.7 High Resolution Experimental Phases For Tryptop 6e-06
3fhj_F297 Independent Saturation Of Three Trprs Subsites Gene 7e-06
3fhj_C280 Independent Saturation Of Three Trprs Subsites Gene 9e-06
2el7_A337 Crystal Structure Of Tryptophanyl-Trna Synthetase F 1e-05
3fhj_D287 Independent Saturation Of Three Trprs Subsites Gene 1e-05
3fi0_A326 Crystal Structure Analysis Of B. Stearothermophilus 1e-05
1i6k_A328 1.7 High Resolution Experimental Phases For Tryptop 2e-05
3jxe_A392 Crystal Structure Of Pyrococcus Horikoshii Tryptoph 2e-05
1o5t_A378 Crystal Structure Of The Aminoacylation Catalytic F 2e-05
2ake_A384 Structure Of Human Tryptophanyl-Trna Synthetase In 2e-05
1ulh_A390 A Short Peptide Insertion Crucial For Angiostatic A 2e-05
2quh_A477 Crystal Structures Of Human Tryptophanyl-Trna Synth 2e-05
2quj_B384 Crystal Structures Of Human Tryptophanyl-Trna Synth 3e-05
3fhj_A300 Independent Saturation Of Three Trprs Subsites Gene 4e-05
3fhj_E293 Independent Saturation Of Three Trprs Subsites Gene 6e-05
3foc_A451 Tryptophanyl-Trna Synthetase From Giardia Lamblia L 7e-05
1yi8_B351 Crystal Structure Of Tryptophanyl Trrna Synthetase 7e-05
2a4m_A331 Structure Of Trprs Ii Bound To Atp Length = 331 8e-05
3tze_A406 Crystal Structure Of A Tryptophanyl-Trna Synthetase 1e-04
2azx_A477 Charged And Uncharged Trnas Adopt Distinct Conforma 1e-04
1d2r_A326 2.9 A Crystal Structure Of Ligand-Free Tryptophanyl 1e-04
1r6u_A437 Crystal Structure Of An Active Fragment Of Human Tr 1e-04
1r6t_A477 Crystal Structure Of Human Tryptophanyl-Trna Synthe 1e-04
2yy5_A348 Crystal Structure Of Tryptophanyl-Trna Synthetase F 3e-04
3kt0_A438 Crystal Structure Of S. Cerevisiae Tryptophanyl-Trn 3e-04
2ip1_A432 Crystal Structure Analysis Of S. Cerevisiae Tryptop 3e-04
>pdb|3VGJ|A Chain A, Crystal Of Plasmodium Falciparum Tyrosyl-Trna Synthetase (Pftyrrs)in Complex With Adenylate Analog Length = 373 Back     alignment and structure 
Iteration: 1

 Score =  383 bits (983), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/287 (63%), Positives = 220/287 (76%)
Query: 27  VRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKI 86
           + SI  ECIQ DEL   L  K + ICYDGFEPSGRMHIAQG++K+I VNKLTS GC    
Sbjct: 34  ILSISSECIQPDELRVKLLLKRKLICYDGFEPSGRMHIAQGLLKSIIVNKLTSNGCTFIF 93
Query: 87  WVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPL 146
           W+ADWFA LNNKM GDLKKI+ VG Y IE+W + GM  E V+FLW+SEEIN + +EYW L
Sbjct: 94  WIADWFAHLNNKMSGDLKKIKKVGSYFIEVWKSCGMNMENVQFLWASEEINKKPNEYWSL 153
Query: 147 VMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKV 206
           V+DI+R   + R+ RC +IMGRSE +E   +QILYPCMQCADIFFL  DICQLG+DQRKV
Sbjct: 154 VLDISRSFNINRMKRCLKIMGRSEGEENYCSQILYPCMQCADIFFLNVDICQLGIDQRKV 213
Query: 207 NVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKA 266
           N+LAREYCD  K K KP+ILSH MLPGL +GQEKMSKSD +SAI+M+D E++VN KIKKA
Sbjct: 214 NMLAREYCDIKKIKKKPVILSHGMLPGLLEGQEKMSKSDENSAIFMDDSESDVNRKIKKA 273
Query: 267 YCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
           YCPP ++E NP   Y K IIFP   +F + R E NGG+KT+ T++ L
Sbjct: 274 YCPPNVIENNPIYAYAKSIIFPSYNEFNLVRKEKNGGDKTYYTLQEL 320
>pdb|3P0J|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With Tyrosinol, Triclinic Crystal Form 1 Length = 690 Back     alignment and structure
>pdb|3P0J|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With Tyrosinol, Triclinic Crystal Form 1 Length = 690 Back     alignment and structure
>pdb|3P0H|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With Fisetin, Cubic Crystal Form Length = 690 Back     alignment and structure
>pdb|3P0H|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With Fisetin, Cubic Crystal Form Length = 690 Back     alignment and structure
>pdb|2J5B|A Chain A, Structure Of The Tyrosyl Trna Synthetase From Acanthamoeba Polyphaga Mimivirus Complexed With Tyrosynol Length = 348 Back     alignment and structure
>pdb|2CYC|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed With L-Tyrosine From Pyrococcus Horikoshii Length = 375 Back     alignment and structure
>pdb|2CYA|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase From Aeropyrum Pernix Length = 364 Back     alignment and structure
>pdb|2CYB|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed With L-Tyrosine From Archaeoglobus Fulgidus Length = 323 Back     alignment and structure
>pdb|1J1U|A Chain A, Crystal Structure Of Archaeal Tyrosyl-Trna Synthetase Complexed With Trna(Tyr) And L-Tyrosine Length = 306 Back     alignment and structure
>pdb|2ZP1|A Chain A, Structual Basis Of Iodo-Tyrosine Recognition By Engineered Archeal Tyrosyl-Trna Synthetase Length = 314 Back     alignment and structure
>pdb|3N2Y|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed With P-(2- Tetrazolyl)-Phenylalanine Length = 314 Back     alignment and structure
>pdb|3QE4|A Chain A, An Evolved Aminoacyl-Trna Synthetase With Atypical Polysubstrate Specificity Length = 312 Back     alignment and structure
>pdb|3D6U|A Chain A, Crystal Structure Of 4-(Trifluoromethyldiazirinyl) Phenylalanyl-Trna Synthetase Length = 314 Back     alignment and structure
>pdb|1U7X|A Chain A, Crystal Structure Of A Mutant M. Jannashii Tyrosyl-Trna Synthetase Specific For O-Methyl-Tyrosine Length = 312 Back     alignment and structure
>pdb|2AG6|A Chain A, Crystal Structure Of P-Bromo-L-Phenylalanine-Trna Sythetase In Complex With P-Bromo-L-Phenylalanine Length = 314 Back     alignment and structure
>pdb|1ZH6|A Chain A, Crystal Structure Of P-Acetylphenylalanine-Trna Synthetase In Complex With P-Acetylphenylalanine Length = 314 Back     alignment and structure
>pdb|2HGZ|A Chain A, Crystal Structure Of A P-Benzoyl-L-Phenylalanyl-Trna Synthetase Length = 306 Back     alignment and structure
>pdb|1ZH0|A Chain A, Crystal Structure Of L-3-(2-Napthyl)alanine-Trna Synthetase In Complex With L-3-(2-Napthyl)alanine Length = 314 Back     alignment and structure
>pdb|2PXH|A Chain A, Crystal Structure Of A Bipyridylalanyl-Trna Synthetase Length = 314 Back     alignment and structure
>pdb|2DLC|X Chain X, Crystal Structure Of The Ternary Complex Of Yeast Tyrosyl-Trna Synthetase Length = 394 Back     alignment and structure
>pdb|1N3L|A Chain A, Crystal Structure Of A Human Aminoacyl-Trna Synthetase Cytokine Length = 372 Back     alignment and structure
>pdb|2G36|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase (Ec 6.1.1.2) (Tryptophan-Trna Ligase)(Trprs) (Tm0492) From Thermotoga Maritima At 2.50 A Resolution Length = 340 Back     alignment and structure
>pdb|3PRH|A Chain A, Tryptophanyl-Trna Synthetase Val144pro Mutant From B. Subtilis Length = 388 Back     alignment and structure
>pdb|3A04|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Length = 372 Back     alignment and structure
>pdb|1I6M|A Chain A, 1.7 High Resolution Experimental Phases For Tryptophanyl-Trna Synthetase Complexed With Tryptophanyl-5'amp Length = 328 Back     alignment and structure
>pdb|2EL7|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Thermus Thermophilus Length = 337 Back     alignment and structure
>pdb|3FI0|A Chain A, Crystal Structure Analysis Of B. Stearothermophilus Tryptophanyl-Trna Synthetase Complexed With Tryptophan, Amp, And Inorganic Phosphate Length = 326 Back     alignment and structure
>pdb|1I6K|A Chain A, 1.7 High Resolution Experimental Phases For Tryptophanyl-Trna Synthetase Complexed With Tryptophanyl-5'amp Length = 328 Back     alignment and structure
>pdb|3JXE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Tryptophanyl-Trna Synthetase In Complex With Trpamp Length = 392 Back     alignment and structure
>pdb|1O5T|A Chain A, Crystal Structure Of The Aminoacylation Catalytic Fragment Of Human Tryptophanyl-Trna Synthetase Length = 378 Back     alignment and structure
>pdb|2AKE|A Chain A, Structure Of Human Tryptophanyl-Trna Synthetase In Complex With Trna(Trp) Length = 384 Back     alignment and structure
>pdb|1ULH|A Chain A, A Short Peptide Insertion Crucial For Angiostatic Activity Of Human Tryptophanyl-Trna Synthetase Length = 390 Back     alignment and structure
>pdb|2QUH|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase In Complex With Trp Length = 477 Back     alignment and structure
>pdb|3FOC|A Chain A, Tryptophanyl-Trna Synthetase From Giardia Lamblia Length = 451 Back     alignment and structure
>pdb|1YI8|B Chain B, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From Deinococcus Radiodurans In Complex With L-Trp Length = 351 Back     alignment and structure
>pdb|2A4M|A Chain A, Structure Of Trprs Ii Bound To Atp Length = 331 Back     alignment and structure
>pdb|3TZE|A Chain A, Crystal Structure Of A Tryptophanyl-Trna Synthetase From Encephalitozoon Cuniculi Bound To Tryptophan Length = 406 Back     alignment and structure
>pdb|2AZX|A Chain A, Charged And Uncharged Trnas Adopt Distinct Conformations When Complexed With Human Tryptophanyl-Trna Synthetase Length = 477 Back     alignment and structure
>pdb|1D2R|A Chain A, 2.9 A Crystal Structure Of Ligand-Free Tryptophanyl-Trna Synthetase: Domain Movements Fragment The Adenine Nucleotide Binding Site. Length = 326 Back     alignment and structure
>pdb|1R6U|A Chain A, Crystal Structure Of An Active Fragment Of Human Tryptophanyl-Trna Synthetase With Cytokine Activity Length = 437 Back     alignment and structure
>pdb|1R6T|A Chain A, Crystal Structure Of Human Tryptophanyl-Trna Synthetase Length = 477 Back     alignment and structure
>pdb|2YY5|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From Mycoplasma Pneumoniae Length = 348 Back     alignment and structure
>pdb|3KT0|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna Synthet Length = 438 Back     alignment and structure
>pdb|2IP1|A Chain A, Crystal Structure Analysis Of S. Cerevisiae Tryptophanyl Trna Synthetase Length = 432 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 1e-139
3p0j_A690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 1e-113
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 1e-138
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 1e-128
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 1e-127
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 1e-127
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 1e-122
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 1e-117
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 1e-115
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 1e-115
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 2e-60
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 5e-59
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 2e-47
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 1e-46
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 2e-43
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 1e-42
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 8e-38
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 2e-28
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 9e-28
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 1e-11
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 2e-10
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 1e-09
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 2e-08
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 2e-08
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 3e-08
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 7e-08
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 8e-08
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 6e-06
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Length = 690 Back     alignment and structure
 Score =  409 bits (1052), Expect = e-139
 Identities = 177/318 (55%), Positives = 226/318 (71%), Gaps = 22/318 (6%)

Query: 11  SSTSTPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMK 70
           +      M+ +E+++L+RS+GEECIQE EL NL+ KKP   CYDGFEPSGRMHIAQG+ K
Sbjct: 2   AHHHHHHMNTDERYKLLRSVGEECIQESELRNLIEKKPLIRCYDGFEPSGRMHIAQGIFK 61

Query: 71  AISVNKLTSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFL 130
           A++VNK T+AGC+   WVADWFA +N+K+GG+L+KI+ VGRYLIE+W A GM  ++V FL
Sbjct: 62  AVNVNKCTAAGCEFVFWVADWFALMNDKVGGELEKIRIVGRYLIEVWKAAGMDMDKVLFL 121

Query: 131 WSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIF 190
           WSSEEI + AD YW +V+DI R+N + RI +CC IMG++E   LTAAQ+LYP MQC DIF
Sbjct: 122 WSSEEITSHADTYWRMVLDIGRQNTIARIKKCCTIMGKTE-GTLTAAQVLYPLMQCCDIF 180

Query: 191 FLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAI 250
           FLKADICQLG+DQRKVN+LAREYCD I RK KP+ILSHHML GL+QGQ KMSKSDP SAI
Sbjct: 181 FLKADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLKQGQAKMSKSDPDSAI 240

Query: 251 YMEDEEAEVNVKIKKAYCPP---------------KIVEGNPCLEYIKYIIFPWDKKFVV 295
           +MED E +V  KI++AYCP                   + NP L+Y + +++        
Sbjct: 241 FMEDTEEDVARKIRQAYCPRVKQSASAITDDGAPVATDDRNPVLDYFQCVVYARPGAAAT 300

Query: 296 ERSEANGGNKTFETMKNL 313
                     T+ T ++L
Sbjct: 301 ------IDGTTYATYEDL 312
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Length = 690 Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Length = 373 Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Length = 323 Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Length = 348 Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Length = 364 Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Length = 375 Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Length = 394 Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Length = 372 Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Length = 314 Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Length = 477 Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Length = 437 Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Length = 406 Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Length = 432 Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Length = 451 Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} Length = 393 Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Length = 386 Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} Length = 395 Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Length = 392 Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Length = 351 Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Length = 340 Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Length = 337 Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} Length = 346 Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Length = 388 Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Length = 328 Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Length = 348 Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Length = 341 Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} PDB: 3m5w_A* Length = 322 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 100.0
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 100.0
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 100.0
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 100.0
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 100.0
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 100.0
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 100.0
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 100.0
1h3f_A 432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 100.0
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 100.0
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 100.0
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 100.0
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 100.0
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 100.0
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 100.0
3p0j_A690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
2jan_A 432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 100.0
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 100.0
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 100.0
1jil_A 420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 100.0
2ts1_A 419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 100.0
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 100.0
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 100.0
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 100.0
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 100.0
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 100.0
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 100.0
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 100.0
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 100.0
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 100.0
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 100.0
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 99.04
2cfo_A 492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 98.69
1j09_A 468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 98.69
2ja2_A 498 Glutamyl-tRNA synthetase; non-discriminating gluta 98.64
3afh_A 488 Glutamyl-tRNA synthetase 2; protein-substrate comp 98.59
3al0_C 592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 98.48
2o5r_A 481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 98.13
3aii_A 553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 98.02
1irx_A 523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 97.96
2d5b_A 500 Methionyl-tRNA synthetase; rossmann fold, class 1A 97.93
4g6z_A 490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 97.86
2csx_A 497 Methionyl-tRNA synthetase; ligase, riken structura 97.69
4dlp_A 536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 97.63
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 97.56
1li5_A 461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 97.5
3kfl_A 564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 97.5
3tqo_A 462 Cysteinyl-tRNA synthetase; protein synthesis, liga 97.49
4gri_A 512 Glutamate--tRNA ligase; structural genomics, seatt 97.33
3sp1_A 501 Cysteinyl-tRNA synthetase; structural genomics, se 97.23
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 97.19
1qtq_A 553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 97.16
1iq0_A 592 Arginyl-tRNA synthetase; riken structural genomics 97.01
2zue_A 629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.39
1f7u_A 607 Arginyl-tRNA synthetase; RNA-protein complex, amin 96.33
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 93.53
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 93.45
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 93.13
2x1l_A 524 Methionyl-tRNA synthetase; nucleotide-binding, pro 93.08
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 92.84
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 91.87
2x1l_A 524 Methionyl-tRNA synthetase; nucleotide-binding, pro 90.61
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 90.14
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 89.97
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 89.61
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 89.38
3h99_A 560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 88.66
3h99_A 560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 87.82
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 86.55
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 85.35
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 84.68
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 82.4
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
Probab=100.00  E-value=1.7e-83  Score=622.33  Aligned_cols=311  Identities=59%  Similarity=1.003  Sum_probs=293.3

Q ss_pred             CCCCCCCCCHHHHHHHHHhhcccccCHHHHHHHHhcCCCCeEEEcccCCCCccchhhhhHHHHHHHHHHCCCeEEEEEec
Q 047474           11 SSTSTPQMSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVAD   90 (326)
Q Consensus        11 ~~~~~~~~~~~~~~~li~r~~~e~~~~~eL~~lL~~~~~~~iy~G~~PTG~lHLG~~~~~~~~~~~lq~aG~~v~ilIaD   90 (326)
                      ++.....|+++||+++|+||++||+++++|+++|++++.+++|+||+|||++||||+++..+++++||++||+++++|||
T Consensus        18 ~~~~~~~~~~~e~~~li~r~~~e~~~~~~L~~~L~~~~~~~iy~G~~PTg~lHlG~gvl~~~~~~~lQ~~G~~~~~lIaD   97 (373)
T 3vgj_A           18 AQEESKIEDVDKILNDILSISSECIQPDELRVKLLLKRKLICYDGFEPSGRMHIAQGLLKSIIVNKLTSNGCTFIFWIAD   97 (373)
T ss_dssp             --CHHHHHHHHHHHHHHHHHCSEEECHHHHHHHHHHCSSCEEEEEECCCSSCBHHHHHHHHHHHHHHHTTTCEEEEEECH
T ss_pred             cccCCCCCCHHHHHHHHHcCcceecCHHHHHHHHhcCCCceEEeCCCCCCCceehhhHHHHHHHHHHHHCCCcEEEEEec
Confidence            34446678999999999999999999999999998766788999999999999999876666789999999999999999


Q ss_pred             ceeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEeCChhHHhhhhhhHHHHHHhhhccCHHHHHhhhhhhcccc
Q 047474           91 WFAQLNNKMGGDLKKIQTVGRYLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSE  170 (326)
Q Consensus        91 ~~a~~~~~~~~~~~~i~~~~~~~~~~~~A~G~d~~k~~~~~~Sd~~~~~~~~~~~~~~~i~~~~tl~~~~~~~~~~~r~~  170 (326)
                      |||+++||+++++++++++++|+++.|+|+|+||+|++||+||+|.++|+.+||.+++++++++++++|+++.++++|.+
T Consensus        98 ~ha~i~d~~~~~~~~i~~~~~~~~~~~~a~G~dp~k~~i~~~S~~~~~~~~l~~~~~~~i~~~~tv~rm~~~~~~~~r~~  177 (373)
T 3vgj_A           98 WFAHLNNKMSGDLKKIKKVGSYFIEVWKSCGMNMENVQFLWASEEINKKPNEYWSLVLDISRSFNINRMKRCLKIMGRSE  177 (373)
T ss_dssp             HHHHHTTGGGGCHHHHHHHHHHHHHHHHHTTCCSTTEEEEEHHHHHHHSHHHHHHHHHHHHTTSBHHHHHTTGGGGTCCT
T ss_pred             ceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCChhheEEEeChhHHhhhhHHHHHHHHHHHccCcHHHHHhhhHHHhhhc
Confidence            99999999889999999999999999999999999999999999877899999999999999999999999999999986


Q ss_pred             cCccchhhhhhhhhhhhhhccccCcEEEeccchhHHHHHHHHHHHHhcCcCCcceeecCcccCCCCCCccccCCCCCCce
Q 047474          171 QDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAI  250 (326)
Q Consensus       171 ~~~~~~~~~~YP~lQaaD~~~l~~d~~~~G~DQ~~~~~lar~~~~k~~~~~~p~~l~~~~lp~L~~g~~KMSKS~~~s~I  250 (326)
                      .+++++|+|+||+|||||++++++|+||||.|||+|++++||+++|+|+.++|+++++|+||||++|++|||||.++|+|
T Consensus       178 ~~~~~~g~f~YPlLQaaDil~l~ad~vpgG~DQ~~~l~l~Rdla~r~~~~~~~~~l~~p~l~gL~dG~~KMSKS~~~~~I  257 (373)
T 3vgj_A          178 GEENYCSQILYPCMQCADIFFLNVDICQLGIDQRKVNMLAREYCDIKKIKKKPVILSHGMLPGLLEGQEKMSKSDENSAI  257 (373)
T ss_dssp             TSCCBTHHHHHHHHHHHHHHHTTCSEECCBGGGHHHHHHHHHHHHHHTCSCCCEEEEBCCCCCSSTTCCSCCSSSTTCCC
T ss_pred             cCCCChHHHHHHHHHHhcccccCCcEEEcchhhHHHHHHHHHHHHHhCCCCCceEEeCCeeecCCCCCCCCcCCCCCCee
Confidence            56789999999999999999999999999999999999999999999988789999999999998887899999988999


Q ss_pred             ecCCCHHHHHHHHHhccCCCCCCCCCcHHHHHHHhccCCCCceeEeecccCCCCceecCHHHHHHHHHhhh
Q 047474          251 YMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEI  321 (326)
Q Consensus       251 ~L~D~~~~i~~KI~kA~c~~~~~~~n~vl~~~~~~ifp~~~~~~i~r~~~~gg~~~y~~~eel~~~~~~~~  321 (326)
                      ||+|+|++|++||++|||||+++++||+++|+++++||+.+.|.++|++++||+++|.++++|+++|....
T Consensus       258 ~L~D~p~~i~~KI~kA~td~~~~~~n~~~~~~~~~~f~~~~~f~~~~~~~~g~~~~~~~~eel~~~~~~g~  328 (373)
T 3vgj_A          258 FMDDSESDVNRKIKKAYCPPNVIENNPIYAYAKSIIFPSYNEFNLVRKEKNGGDKTYYTLQELEHDYVNGF  328 (373)
T ss_dssp             BTTCCHHHHHHHHHHSCCCTTCCTTCHHHHHHHHTHHHHHSSEEECCCGGGTCCEEECCHHHHHHHHHTTS
T ss_pred             ecCCCHHHHHHHHHhCcCCCCCCCCCcchhhhhhhhhhhhhhhcccccccccCCcCcccHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998653
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 326
d1n3la_339 c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Hum 1e-46
d1r6ta2386 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase ( 3e-33
d1j1ua_306 c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Arc 6e-33
d1i6la_326 c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) 2e-23
d1h3fa1343 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) 7e-19
d1jila_323 c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Sta 1e-13
d2ts1a_319 c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bac 5e-06
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Length = 339 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Tyrosyl-tRNA synthetase (TyrRS)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (401), Expect = 1e-46
 Identities = 85/299 (28%), Positives = 144/299 (48%), Gaps = 11/299 (3%)

Query: 18  MSVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKL 77
            S EEK  L+    +E + E++L  +L ++     Y G   +G+ H+A  V     +   
Sbjct: 2   PSPEEKLHLITRNLQEVLGEEKLKEILKERE-LKIYWGTATTGKPHVAYFVP-MSKIADF 59

Query: 78  TSAGCKVKIWVADWFAQLNNKMGGDLKKIQTVGRY---LIEIWIAVGMRTERVEFLWSSE 134
             AGC+V I  AD  A L+N           V  Y   +  +  ++G+  E+++F+  ++
Sbjct: 60  LKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 119

Query: 135 EINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDELTAAQILYPCMQCADIFFLKA 194
              +   EY   V  ++         +    + +   +    + +LYP +Q  D  +LK 
Sbjct: 120 YQLS--KEYTLDVYRLSSVVTQHDSKKAGAEVVKQV-EHPLLSGLLYPGLQALDEEYLKV 176

Query: 195 DICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMED 254
           D    G+DQRK+   A +Y   +   +K + L + M+PGL   +  MS S+  S I + D
Sbjct: 177 DAQFGGIDQRKIFTFAEKYLPAL-GYSKRVHLMNPMVPGLTGSK--MSSSEEESKIDLLD 233

Query: 255 EEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNL 313
            + +V  K+KKA+C P  VE N  L +IK+++FP   +FV+ R E  GGNKT+    +L
Sbjct: 234 RKEDVKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDL 292
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Length = 386 Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 306 Back     information, alignment and structure
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Length = 326 Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Length = 343 Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Length = 323 Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 100.0
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 100.0
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 100.0
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 100.0
d1i6la_326 Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus ste 100.0
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 100.0
d2ts1a_319 Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearoth 100.0
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 98.33
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 98.33
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 97.81
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 97.69
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 97.65
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 97.58
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 97.26
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 95.56
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 95.03
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 94.83
d1h3na3 494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 89.9
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 87.17
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 82.98
d1ilea3 452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 82.97
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 82.75
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Tyrosyl-tRNA synthetase (TyrRS)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-68  Score=510.44  Aligned_cols=294  Identities=29%  Similarity=0.423  Sum_probs=256.1

Q ss_pred             CHHHHHHHHHhhcccccCHHHHHHHHhcCCCCeEEEcccCCCCccchhhhhHHHHHHHHHHCCCeEEEEEecceeeecCC
Q 047474           19 SVEEKFRLVRSIGEECIQEDELLNLLTKKPQPICYDGFEPSGRMHIAQGVMKAISVNKLTSAGCKVKIWVADWFAQLNNK   98 (326)
Q Consensus        19 ~~~~~~~li~r~~~e~~~~~eL~~lL~~~~~~~iy~G~~PTG~lHLG~~~~~~~~~~~lq~aG~~v~ilIaD~~a~~~~~   98 (326)
                      |++||++|++||++|+++++||+++|++ +++++|+||+|||.+||||+++. ++++++|++|++++++||||||+++|+
T Consensus         3 s~~e~~~li~r~~~ei~~~~eL~~~l~~-~~~~vy~G~~PTg~lHlG~~l~~-~~l~~~q~~g~~~~~~IaD~~a~~~~~   80 (339)
T d1n3la_           3 SPEEKLHLITRNLQEVLGEEKLKEILKE-RELKIYWGTATTGKPHVAYFVPM-SKIADFLKAGCEVTILFADLHAYLDNM   80 (339)
T ss_dssp             CHHHHHHHHHTTCSEEECHHHHHHHHTT-SCCEEEEEECCSSCCBGGGHHHH-HHHHHHHHTTCEEEEEECHHHHHHTTT
T ss_pred             CHHHHHHHHHcCCceeCCHHHHHHHHcc-CCCEEEEeeCCCCccHHHHHHHH-HHHHHHHHCCCcEEEEecchhhhccCC
Confidence            7899999999999999999999999975 36789999999999999998764 478999999999999999999999987


Q ss_pred             CCCCHHHHHHHHH----HHHHHHHHcCCCCCceEEEeCChhHHhhhhhhHHHHHHhhhccCHHHHHhhhhhhcccccCcc
Q 047474           99 MGGDLKKIQTVGR----YLIEIWIAVGMRTERVEFLWSSEEINARADEYWPLVMDIARRNKLPRIMRCCQIMGRSEQDEL  174 (326)
Q Consensus        99 ~~~~~~~i~~~~~----~~~~~~~A~G~d~~k~~~~~~Sd~~~~~~~~~~~~~~~i~~~~tl~~~~~~~~~~~r~~~~~~  174 (326)
                      . .+.+..+.+..    .+.+.++|+|+||+++.|++||+|. . ...||..++++++.+++.++.+....+.+. .+++
T Consensus        81 ~-~~~~~~~~~~~~~~~~~~~~~~a~g~d~~k~~i~~~sd~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  156 (339)
T d1n3la_          81 K-APWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQ-L-SKEYTLDVYRLSSVVTQHDSKKAGAEVVKQ-VEHP  156 (339)
T ss_dssp             T-SCHHHHHHHHHHHHHHHHHHHHHHTCCCTTEEEEEGGGTT-T-SHHHHHHHHHHHTTSCHHHHHHHTTTTSCC-CSSC
T ss_pred             C-CchHHHHHHHHHHHHHHHHHHHhhccChHHheeeecChHh-h-hhhHHHHHhhHHHHHHHHHHHHHHHHHhcc-CCCC
Confidence            4 45554444443    3456788999999999999999964 3 356888889999999999888765444443 3567


Q ss_pred             chhhhhhhhhhhhhhccccCcEEEeccchhHHHHHHHHHHHHhcCcCCcceeecCcccCCCCCCccccCCCCCCceecCC
Q 047474          175 TAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMED  254 (326)
Q Consensus       175 ~~~~~~YP~lQaaD~~~l~~d~~~~G~DQ~~~~~lar~~~~k~~~~~~p~~l~~~~lp~L~~g~~KMSKS~~~s~I~L~D  254 (326)
                      ++|+|+||+|||||++++++|+||||.|||+|++++||+++|+|.. +|+.+++|++|++ +| .|||||.++|+|||+|
T Consensus       157 ~~g~f~YP~lQaaDil~~~ad~v~~G~DQ~~~i~l~rd~a~r~~~~-~~~~l~~pll~~l-~g-~kmsks~~~~~I~l~D  233 (339)
T d1n3la_         157 LLSGLLYPGLQALDEEYLKVDAQFGGIDQRKIFTFAEKYLPALGYS-KRVHLMNPMVPGL-TG-SKMSSSEEESKIDLLD  233 (339)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHHHGGGGTCC-CCEEEEECCCCCS-SC-C-------CCSCBTTC
T ss_pred             ccccccccHHHHHHHHhccCCccccchhHHHHHHHHHHHHhhhccC-cceeeeecccccc-cc-ccccccchhhcccccC
Confidence            9999999999999999999999999999999999999999999975 5889999999999 67 5999998999999999


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCcHHHHHHHhccCCCCceeEeecccCCCCceecCHHHHHHHHHhhh
Q 047474          255 EEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFETMKNLLLIMKKEI  321 (326)
Q Consensus       255 ~~~~i~~KI~kA~c~~~~~~~n~vl~~~~~~ifp~~~~~~i~r~~~~gg~~~y~~~eel~~~~~~~~  321 (326)
                      +|++|++||++|+|+++++++||+++++++++||..+.+.+++.+++||+++|.+++||+++|.++.
T Consensus       234 ~~~~I~kKI~~a~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~y~~g~  300 (339)
T d1n3la_         234 RKEDVKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEV  300 (339)
T ss_dssp             CHHHHHHHHHTCCCCTTCCSSCHHHHHHHHTTGGGTTCEEECCCGGGTCCEEESSHHHHHHHHHTTC
T ss_pred             CHHHHHHHHhhccCCCCCcccCccccchhhhccchhhccccccHHHhcCCCCcCCHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999998764
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure