| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG0689 |
All predicted COG clusters |
|---|---|---|---|
| 1g002054m | 974 | hhsearch probability: 99.97 Identity: 22% subject length: 230 Length of aligned reigon: 200 Coverage over query: 67-276 Coverage over subject: 18-229 |
COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG1094, Predicted RNA-binding protein (contains KH domains) [General function prediction only] |
| 1g002487m | 916 | hhsearch probability: 99.97 Identity: 19% subject length: 230 Length of aligned reigon: 201 Coverage over query: 97-308 Coverage over subject: 17-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1530, CafA Ribonucleases G and E [Translation, ribosomal structure and biogenesis] COG2183, Tex Transcriptional accessory protein [Transcription] |
| 1g030980m | 168 | hhsearch probability: 99.54 Identity: 27% subject length: 230 Length of aligned reigon: 109 Coverage over query: 1-122 Coverage over subject: 39-150 |
COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g022140m | 302 | hhsearch probability: 100.00 Identity: 21% subject length: 230 Length of aligned reigon: 220 Coverage over query: 33-297 Coverage over subject: 5-230 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026528m | 237 | hhsearch probability: 99.94 Identity: 21% subject length: 230 Length of aligned reigon: 185 Coverage over query: 1-227 Coverage over subject: 39-229 |
COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g043337m | 465 | hhsearch probability: 99.97 Identity: 24% subject length: 230 Length of aligned reigon: 216 Coverage over query: 24-277 Coverage over subject: 5-229 |
COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026142m | 243 | hhsearch probability: 100.00 Identity: 26% subject length: 230 Length of aligned reigon: 214 Coverage over query: 2-232 Coverage over subject: 6-230 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026141m | 243 | hhsearch probability: 100.00 Identity: 26% subject length: 230 Length of aligned reigon: 214 Coverage over query: 2-232 Coverage over subject: 6-230 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g024064m | 273 | hhsearch probability: 100.00 Identity: 27% subject length: 230 Length of aligned reigon: 215 Coverage over query: 2-262 Coverage over subject: 6-230 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g028091m | 214 | hhsearch probability: 100.00 Identity: 39% subject length: 230 Length of aligned reigon: 211 Coverage over query: 3-213 Coverage over subject: 2-214 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g025482m | 252 | hhsearch probability: 100.00 Identity: 40% subject length: 230 Length of aligned reigon: 225 Coverage over query: 3-228 Coverage over subject: 2-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g024906m | 260 | hhsearch probability: 100.00 Identity: 32% subject length: 230 Length of aligned reigon: 219 Coverage over query: 33-251 Coverage over subject: 4-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g037553m | 151 | hhsearch probability: 99.96 Identity: 34% subject length: 230 Length of aligned reigon: 119 Coverage over query: 33-151 Coverage over subject: 4-127 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026262m | 241 | hhsearch probability: 100.00 Identity: 40% subject length: 230 Length of aligned reigon: 225 Coverage over query: 4-228 Coverage over subject: 3-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026224m | 241 | hhsearch probability: 100.00 Identity: 40% subject length: 230 Length of aligned reigon: 225 Coverage over query: 4-228 Coverage over subject: 3-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026213m | 241 | hhsearch probability: 100.00 Identity: 40% subject length: 230 Length of aligned reigon: 225 Coverage over query: 4-228 Coverage over subject: 3-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g047153m | 100 | hhsearch probability: 99.93 Identity: 25% subject length: 230 Length of aligned reigon: 99 Coverage over query: 2-100 Coverage over subject: 6-123 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g025943m | 246 | hhsearch probability: 100.00 Identity: 39% subject length: 230 Length of aligned reigon: 219 Coverage over query: 3-222 Coverage over subject: 2-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |
| 1g026672m | 235 | hhsearch probability: 100.00 Identity: 40% subject length: 230 Length of aligned reigon: 218 Coverage over query: 4-222 Coverage over subject: 3-229 |
COG0689, Rph RNase PH [Translation, ribosomal structure and biogenesis] COG2123, RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] |