Psyllid ID: psy10178

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-----
MAATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNNKPPSGPPTPGGPPPGPDMNVGPKVKCISYYDETAPSKPNTIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNR
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccccEEccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cccccccccccccccccccHHEEEEcccccccccccccccccccccccccccccccccccccccccccHHcHcccccccccccccccccEEcccccccccccccccccccHEHHcccccccccccccccccccccccccccccEEEcccccccccccccHHccccccccccccccccccccccccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHEccccccccccccccccccHHHHHHHHHHHHEEccccccEEEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHccHHHHccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcHHcHHHHHHccccccccccHHHHcccHHHHHHHHHHccHHHccccHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
maatqaeppvpeasgpvdpgasvdmehggppppqslqngeknnkppsgpptpggpppgpdmnvgpkvkcisyydetapskpntivnsdvhvvksedkangmtttkpeetsvkiennkegestvkkentegeetvktdntkegeatvklenggeepsatdkaekettekpevkfvpkiidpagnakrrrlseyedesycrdeaslypvsdsqdNIARRCIALSNILrnltfvpgnelefsknSTFLRLLGRLILAYHEhglratktrnydkddddwtdccsslspqaesEWWWDYMENIRENVLVSLANisghidldqypedisrpildgllhwavcpaaqgqdpfpssscnlspqRLALEALCKLCvtdnnvdlviatppyarlERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANqhgigalrdnpdsmgtsLDMLRRTARTLLhlsrhpdnkplFLQQEQRLLALVMSQILDQQVAAIISRVLYqtrpdlyqnsehasrekrKIVTKKSVAnqhgigalrdnpdsmgtSLDMLRRVANQHGigalrdnpdsmgtsLDMLRRTARTLLhlsrhpdnkplFLQQEQRLLALVMSQILDQQVAAIISRVLYqtrpdlyqnr
maatqaeppvpeasGPVDPGASVDMEHGGPPPPQSLQNGEKNNKPPSGPPTPGGPPPGPDMNVGPKVKCISYYDEtapskpntivnsdvhvvksedkangmtttkpeetsvkiennkegestvkkentegeetvktdntkegeatvklenggeepsatdkaekettekpevkfvpkiidpagnakrrrlseyedesycrdeaslypvsdsqdnIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHehglratktrnydkddddWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPdlyqnsehasrekrkivtkksvanqhgigalrdnpdsMGTSLDMLRRVANQHgigalrdnpdsmgTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVlyqtrpdlyqnr
MAATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNNKppsgpptpggpppgpDMNVGPKVKCISYYDETAPSKPNTIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYdkddddwtdCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNR
******************************************************************VKCISYY**********************************************************************************************************************************LYPV***QDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQ**********NLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGA******************ARTLLHL******KPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDL**************************************************************************TLLHL******KPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTR*******
****************************************************************************************************************************************************************************************************YCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEH***********************LSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQ*********CNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQ**********************TSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDL**************VT*KSVANQHGIGALRDNPDSMGTSLD**********************TSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPD*****
*****************DPGASVDMEHGGP**********************GGPPPGPDMNVGPKVKCISYYDETAPSKPNTIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLE*******************PEVKFVPKIIDPAGNAKR***********CRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQN***********VTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNR
*********************************************PSGPPTPGGPPPGPDMNVGPKVKCISYYDETAPSKPNTIVNSDVHVVKS********************************************************************************************RRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEH*******************CCS*****AESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRK*VTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLY***
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MAATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNNKPPSGPPTPGGPPPGPDMNVGPKVKCISYYDETAPSKPNTIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query655 2.2.26 [Sep-21-2011]
Q8IN942716 Trithorax group protein o yes N/A 0.529 0.127 0.721 1e-146
Q8NFD52236 AT-rich interactive domai yes N/A 0.502 0.147 0.445 9e-79
A2BH402283 AT-rich interactive domai no N/A 0.541 0.155 0.430 6e-69
O144972285 AT-rich interactive domai no N/A 0.538 0.154 0.434 2e-68
Q9NGB4324 Trithorax group protein o N/A N/A 0.167 0.339 0.845 3e-49
Q9N6K2324 Trithorax group protein o N/A N/A 0.167 0.339 0.845 6e-49
>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila melanogaster GN=osa PE=1 SV=1 Back     alignment and function desciption
 Score =  520 bits (1339), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/359 (72%), Positives = 297/359 (82%), Gaps = 12/359 (3%)

Query: 174  VPKIIDPAGNAK-------RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILR 226
             P I DP   AK       RRR S +EDE Y RDEASL+ VS+SQD++ARRCIALSNI R
Sbjct: 2145 TPAIFDPRTTAKDEARVLQRRRDSSFEDECYTRDEASLHLVSESQDSLARRCIALSNIFR 2204

Query: 227  NLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDD-DWTDCCSSLSPQ 285
            NLTFVPGNE   +K++ FL +LGRL+L  HEH  R  KTRNYD+++D D++D CSSL  Q
Sbjct: 2205 NLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDREEDTDFSDSCSSL--Q 2262

Query: 286  AESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPF 345
             E EWWWDY+  IREN+LV++ANI+GH++L +Y E I+RP++DGLLHWAVCP+A GQDPF
Sbjct: 2263 GEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPF 2322

Query: 346  PSSSCN--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVL 403
            PS   N  LSPQRLALEALCKLCVTD NVDLVIATPP++RLE+L  VLTR LC+NEDQVL
Sbjct: 2323 PSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVL 2382

Query: 404  REFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPD 463
            REF VNLLHYLAAADSAM+RT+ALQSPCIS LVAFIEQAEQ ALGVANQHGI  LR+NPD
Sbjct: 2383 REFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPD 2442

Query: 464  SMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
            SMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 2443 SMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQ 2501
Trithorax group (trxG) protein required for embryonic segmentation, development of the notum and wing margin, and photoreceptor differentiation. Required for the activation of genes such as Antp, Ubx and Eve. Binds to DNA without specific affinity, suggesting that it is recruited to promoters by promoter-specific proteins. Essential component of the Brahma complex, a multiprotein complex which is the equivalent of the yeast SWI/SNF complex and acts by remodeling the chromatin by catalyzing an ATP-dependent alteration in the structure of nucleosomal DNA. This complex can both serve as a transcriptional coactivator or corepressor, depending on the context. Acts as an essential coactivator for Zeste, which recruits the whole complex to specific genes. In contrast, it acts as a corepressor for Wg target genes, possibly via an interaction with Pan and Gro. It also acts as a negative regulator for proneural achaete-scute, when it is directly recruited by Pan and Chi. Also represses E2f activation.
Drosophila melanogaster (taxid: 7227)
>sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing protein 1B OS=Homo sapiens GN=ARID1B PE=1 SV=2 Back     alignment and function description
>sp|A2BH40|ARI1A_MOUSE AT-rich interactive domain-containing protein 1A OS=Mus musculus GN=Arid1a PE=1 SV=1 Back     alignment and function description
>sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens GN=ARID1A PE=1 SV=3 Back     alignment and function description
>sp|Q9NGB4|OSA_DROYA Trithorax group protein osa (Fragment) OS=Drosophila yakuba GN=osa PE=3 SV=1 Back     alignment and function description
>sp|Q9N6K2|OSA_DROSI Trithorax group protein osa (Fragment) OS=Drosophila simulans GN=osa PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query655
403182886 2047 AAEL017280-PA [Aedes aegypti] 0.661 0.211 0.628 1e-155
345483492 1177 PREDICTED: trithorax group protein osa [ 0.635 0.353 0.646 1e-154
307169896 2116 Trithorax group protein osa [Camponotus 0.616 0.190 0.645 1e-153
307210169 2098 Trithorax group protein osa [Harpegnatho 0.613 0.191 0.645 1e-152
383849904 2067 PREDICTED: uncharacterized protein LOC10 0.615 0.194 0.652 1e-152
328787106 2066 PREDICTED: hypothetical protein LOC41204 0.613 0.194 0.646 1e-151
350406792 2066 PREDICTED: hypothetical protein LOC10074 0.613 0.194 0.653 1e-151
340721281 2066 PREDICTED: hypothetical protein LOC10065 0.613 0.194 0.653 1e-151
322798670 2078 hypothetical protein SINV_16128 [Solenop 0.526 0.166 0.737 1e-150
347966577 3239 AGAP001786-PA [Anopheles gambiae str. PE 0.629 0.127 0.658 1e-150
>gi|403182886|gb|EJY57697.1| AAEL017280-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/449 (62%), Positives = 338/449 (75%), Gaps = 16/449 (3%)

Query: 82   NTIVNSDVHVVKSEDK--ANGMTTTK--PEETSVKIENNKEGESTVKKEN-TEGEETVKT 136
            N IVN +    + + K   +     K  PE T     + +E +  ++K + + G +   T
Sbjct: 1445 NRIVNGETTEAEEDSKPSVDSFVVKKEVPEVTPSSDADCREIDMELEKSSLSNGPQEGPT 1504

Query: 137  DNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDES 196
             +  + +  VK+E   EE    DK   E   +        I DPA   KRRR+S+YEDE 
Sbjct: 1505 ADESDSKEDVKMEI--EE----DKVVDEKVTEQNFNVTATIQDPAKVLKRRRMSDYEDEC 1558

Query: 197  YCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYH 256
            Y RDEASLY V++  D +ARRC+A+SNILRNLTFVP NE EFS++S FL +LG+++L +H
Sbjct: 1559 YTRDEASLYLVTEGHDALARRCVAISNILRNLTFVPNNETEFSRSSRFLSILGKILLLHH 1618

Query: 257  EHGLRATKTRNYDKDDD-DWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDL 315
            EH +R  KTRNYD+++D D++D CSSL  Q ESEWWWD++  IREN+LVS+ANI+G +DL
Sbjct: 1619 EHPVRTKKTRNYDREEDADFSDSCSSL--QGESEWWWDFLVQIRENMLVSMANIAGQLDL 1676

Query: 316  DQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALCKLCVTDNNVD 373
             ++ E ISRPILDGLLHW+VCP+A GQDPFP+   N  LSPQRLALEALCKLCVTD+NVD
Sbjct: 1677 SRFDEPISRPILDGLLHWSVCPSAHGQDPFPTLGVNSVLSPQRLALEALCKLCVTDSNVD 1736

Query: 374  LVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCIS 433
            LVIATPPY RLE+L  VLTR LCKNEDQVLREF VNLLHYLAAADSAM+RTIALQSPC+S
Sbjct: 1737 LVIATPPYTRLEKLCSVLTRHLCKNEDQVLREFSVNLLHYLAAADSAMARTIALQSPCVS 1796

Query: 434  LLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFL 493
             LVAFIEQAEQ ALGVANQHGI  LRDNPDSMGTSLDMLRR A TLLHL++HPDN+PLFL
Sbjct: 1797 YLVAFIEQAEQTALGVANQHGINYLRDNPDSMGTSLDMLRRAAGTLLHLAKHPDNRPLFL 1856

Query: 494  QQEQRLLALVMSQILDQQVAAIISRVLYQ 522
            QQEQRLL LVMS ILDQQVA IISRVL+Q
Sbjct: 1857 QQEQRLLGLVMSHILDQQVALIISRVLFQ 1885

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345483492|ref|XP_001600023.2| PREDICTED: trithorax group protein osa [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307169896|gb|EFN62405.1| Trithorax group protein osa [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307210169|gb|EFN86842.1| Trithorax group protein osa [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383849904|ref|XP_003700574.1| PREDICTED: uncharacterized protein LOC100883763 [Megachile rotundata] Back     alignment and taxonomy information
>gi|328787106|ref|XP_395512.4| PREDICTED: hypothetical protein LOC412046 [Apis mellifera] Back     alignment and taxonomy information
>gi|350406792|ref|XP_003487883.1| PREDICTED: hypothetical protein LOC100748451 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340721281|ref|XP_003399052.1| PREDICTED: hypothetical protein LOC100651892 [Bombus terrestris] Back     alignment and taxonomy information
>gi|322798670|gb|EFZ20274.1| hypothetical protein SINV_16128 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|347966577|ref|XP_321283.5| AGAP001786-PA [Anopheles gambiae str. PEST] gi|333469996|gb|EAA01115.6| AGAP001786-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query655
FB|FBgn02618852716 osa "osa" [Drosophila melanoga 0.650 0.156 0.616 2.2e-132
UNIPROTKB|H9KYS81366 ARID1A "Uncharacterized protei 0.603 0.289 0.419 2.8e-75
UNIPROTKB|E2RSH92286 ARID1A "Uncharacterized protei 0.587 0.168 0.403 1.3e-72
MGI|MGI:19351472283 Arid1a "AT rich interactive do 0.587 0.168 0.403 2e-72
UNIPROTKB|F1P4791614 Gga.35990 "Uncharacterized pro 0.598 0.242 0.403 2.9e-72
UNIPROTKB|F1NKI71618 Gga.35990 "Uncharacterized pro 0.598 0.242 0.403 2.9e-72
UNIPROTKB|Q96SM7613 ARID1A "AT-rich interactive do 0.586 0.626 0.41 6e-72
UNIPROTKB|O144972285 ARID1A "AT-rich interactive do 0.586 0.168 0.41 8.7e-72
UNIPROTKB|F1SB281292 ARID1B "Uncharacterized protei 0.598 0.303 0.405 1.1e-71
RGD|13105002291 Arid1a "AT rich interactive do 0.587 0.168 0.403 1.4e-71
FB|FBgn0261885 osa "osa" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1275 (453.9 bits), Expect = 2.2e-132, Sum P(3) = 2.2e-132
 Identities = 276/448 (61%), Positives = 322/448 (71%)

Query:    93 KSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKT-DNTKEGEATVKLENG 151
             K E K    +T   E+T  K      G S+    + EG+++  T +   +  A VK E G
Sbjct:  2058 KPEIKTEENSTE--EQTFNKKRRLVSGGSSSSGAHAEGKKSKLTSEEFAQPNAEVKKEPG 2115

Query:   152 GEE----PSATD-KAEKE--TTEKPEVKFVPKIIDPAGNAK-------RRRLSEYEDESY 197
               +    P   D +A ++  T         P I DP   AK       RRR S +EDE Y
Sbjct:  2116 TADSDCRPVDMDIEAPQQRLTNGVAPCSSTPAIFDPRTTAKDEARVLQRRRDSSFEDECY 2175

Query:   198 CRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHE 257
              RDEASL+ VS+SQD++ARRCIALSNI RNLTFVPGNE   +K++ FL +LGRL+L  HE
Sbjct:  2176 TRDEASLHLVSESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHE 2235

Query:   258 HGLRATKTRNYXXXXXXXXX-CCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLD 316
             H  R  KTRNY           CSSL  Q E EWWWDY+  IREN+LV++ANI+GH++L 
Sbjct:  2236 HLRRTPKTRNYDREEDTDFSDSCSSL--QGEREWWWDYLITIRENMLVAMANIAGHLELS 2293

Query:   317 QYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALCKLCVTDNNVDL 374
             +Y E I+RP++DGLLHWAVCP+A GQDPFPS   N  LSPQRLALEALCKLCVTD NVDL
Sbjct:  2294 RYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSVLSPQRLALEALCKLCVTDANVDL 2353

Query:   375 VIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISL 434
             VIATPP++RLE+L  VLTR LC+NEDQVLREF VNLLHYLAAADSAM+RT+ALQSPCIS 
Sbjct:  2354 VIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISY 2413

Query:   435 LVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQ 494
             LVAFIEQAEQ ALGVANQHGI  LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+Q
Sbjct:  2414 LVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQ 2473

Query:   495 QEQRLLALVMSQILDQQVAAIISRVLYQ 522
             QEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct:  2474 QEQRLLGLVMSHILDQQVALIISRVLYQ 2501
GO:0046530 "photoreceptor cell differentiation" evidence=IMP
GO:0005634 "nucleus" evidence=NAS;IDA
GO:0016055 "Wnt receptor signaling pathway" evidence=IMP
GO:0008587 "imaginal disc-derived wing margin morphogenesis" evidence=IMP
GO:0007379 "segment specification" evidence=IMP
GO:0003677 "DNA binding" evidence=ISS;IDA;NAS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA;IMP
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA
GO:0035060 "brahma complex" evidence=IDA;TAS
GO:0003713 "transcription coactivator activity" evidence=IC
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP
GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IGI
GO:0042058 "regulation of epidermal growth factor receptor signaling pathway" evidence=IMP
GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP
GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP
GO:0022008 "neurogenesis" evidence=IMP
UNIPROTKB|H9KYS8 ARID1A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSH9 ARID1A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1935147 Arid1a "AT rich interactive domain 1A (SWI-like)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P479 Gga.35990 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NKI7 Gga.35990 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q96SM7 ARID1A "AT-rich interactive domain-containing protein 1A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O14497 ARID1A "AT-rich interactive domain-containing protein 1A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SB28 ARID1B "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1310500 Arid1a "AT rich interactive domain 1A (SWI-like)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8IN94OSA_DROMENo assigned EC number0.72140.52970.1277yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query655
pfam12031257 pfam12031, DUF3518, Domain of unknown function (DU 1e-122
pfam06346160 pfam06346, Drf_FH1, Formin Homology Region 1 0.004
>gnl|CDD|152466 pfam12031, DUF3518, Domain of unknown function (DUF3518) Back     alignment and domain information 
 Score =  361 bits (929), Expect = e-122
 Identities = 136/264 (51%), Positives = 178/264 (67%), Gaps = 10/264 (3%)

Query: 212 DNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKD 271
           D++A+RCI +SNI+RNL+FVPGN++E S++   L +LG+L+L +HEH  R    R Y ++
Sbjct: 1   DSLAKRCICVSNIVRNLSFVPGNDIEMSRHPGLLLILGKLLLLHHEHPERKPAPRTYQRE 60

Query: 272 DD-DWTDCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGL 330
           ++ D    CS      + EWWWD +E +REN LV+LANISG +DL  YPE I  PILDGL
Sbjct: 61  EEEDDGLSCS------KDEWWWDCLEVLRENTLVTLANISGQLDLSFYPESICLPILDGL 114

Query: 331 LHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLT 388
           LHW VCP+A+ QDPFP++  N  LSPQRL LEALCKL + DNNVDL++ATPP++RLE+L 
Sbjct: 115 LHWMVCPSAEAQDPFPTAGPNSVLSPQRLVLEALCKLSIQDNNVDLILATPPFSRLEKLF 174

Query: 389 YVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALG 448
             L R L   ++QV RE  V LL  LA  DS  +R IALQ  CI  LV F+E A   A  
Sbjct: 175 ATLVRHLGDRKNQVCREMAVVLLSNLAQGDSTAARAIALQKGCIGNLVGFLEDAVAMAQY 234

Query: 449 VANQHGIGALRDNPDSMGTSLDML 472
             +QH +     +PD   TS+DM+
Sbjct: 235 QQSQHSL-LHMGSPDFEPTSVDMM 257

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 260 amino acids in length. This domain is found associated with pfam01388. Length = 257
>gnl|CDD|148139 pfam06346, Drf_FH1, Formin Homology Region 1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 655
PF12031257 DUF3518: Domain of unknown function (DUF3518); Int 100.0
PF12031257 DUF3518: Domain of unknown function (DUF3518); Int 100.0
KOG1924|consensus1102 98.89
KOG1924|consensus1102 98.66
KOG1923|consensus830 97.04
KOG1923|consensus830 96.86
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 95.44
KOG1922|consensus833 94.09
COG5178 2365 PRP8 U5 snRNP spliceosome subunit [RNA processing 93.6
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 93.02
PRK153192039 AIDA autotransporter-like protein ShdA; Provisiona 92.85
PRK153192039 AIDA autotransporter-like protein ShdA; Provisiona 92.54
PF05804 708 KAP: Kinesin-associated protein (KAP) 89.05
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 89.0
PF04826254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 88.53
PHA032473151 large tegument protein UL36; Provisional 86.98
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 86.73
KOG1830|consensus518 86.21
PRK15313955 autotransport protein MisL; Provisional 85.65
PRK097521250 adhesin; Provisional 85.25
PF05804 708 KAP: Kinesin-associated protein (KAP) 82.88
KOG1925|consensus817 80.02
>PF12031 DUF3518: Domain of unknown function (DUF3518); InterPro: IPR021906 This presumed domain is functionally uncharacterised Back     alignment and domain information 
Probab=100.00  E-value=2.2e-105  Score=797.47  Aligned_cols=254  Identities=64%  Similarity=1.067  Sum_probs=248.5

Q ss_pred             HHhhhhHHHHhhhhhccccccCchhhhhcCcchHHHHHHHHHhhhccccccccCCCCCCC-CCccccccCCCCccchhhh
Q psy10178        212 DNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKD-DDDWTDCCSSLSPQAESEW  290 (655)
Q Consensus       212 d~la~RcicvSNIlR~LSFvPgNe~emakh~~lL~iLgrlLlLhheH~~r~~~~~~y~~e-d~d~~~~~~~~~~~~~~~W  290 (655)
                      |+|+||||||||||||||||||||.+||||+|||+||||+|+|||+||.|++++++|++| |+|++.+|+      +++|
T Consensus         1 d~la~RclclSNIlR~LSFvpGnd~emskh~~lL~ilGrlLlL~h~h~~r~~~~~~~~~~e~~~~~~~~~------~~~w   74 (257)
T PF12031_consen    1 DSLARRCLCLSNILRGLSFVPGNDTEMSKHPGLLLILGRLLLLHHEHPERKQKPRTYDREEEEDESLSCS------EAEW   74 (257)
T ss_pred             ChHHHHHHHHHHHHhccCcCCCcHHHHhhChhHHHHHHHHHhcccCCcccccCCCCcchhhhhccccccc------hHHH
Confidence            689999999999999999999999999999999999999999999999999999999998 567788876      6699


Q ss_pred             HHHHHHHhhhhhHHhhhhccccccccCCCCCCchhhhhhhhhcccccccCCCCCCCCCCCC--CChHHHHHHHhhccccc
Q psy10178        291 WWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALCKLCVT  368 (655)
Q Consensus       291 wwd~l~~LReNaLVtLaNiagqLDLs~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~--lSPqrlALEaL~KLsI~  368 (655)
                      |||||++|||||||+|+||||||||+.|||+|++|||||||||+|||+|+||||||+.|++  |||||||||+||||||+
T Consensus        75 wwd~l~~lREnalV~laNisgqLdLs~~~e~I~~PildGLLHWaVcpsa~A~Dpfp~~~~~~~lSPqrlaLEaLcKLsV~  154 (257)
T PF12031_consen   75 WWDCLEQLRENALVTLANISGQLDLSDYPESIARPILDGLLHWAVCPSAEAQDPFPTAGPHSPLSPQRLALEALCKLSVI  154 (257)
T ss_pred             HHHHHHHHhhcceEeeeeeeeeeecccCchHHHHHHHHHHHHHHhccchhccCCCCCCCCCCCCCHHHHHHHHHHHhhee
Confidence            9999999999999999999999999999999999999999999999999999999999976  99999999999999999


Q ss_pred             cCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHh
Q psy10178        369 DNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALG  448 (655)
Q Consensus       369 d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~  448 (655)
                      ++|||+|||||||+|+|+||++|+|||++++++++||||||+|+|||++|+.+||+||.|++||+.||+|||++++||++
T Consensus       155 e~NVDliLaTpp~sRlE~l~~~L~r~l~~~e~~v~REfAvvlL~~La~~~~~~~r~iA~q~~~i~~Li~FiE~a~~~~~~  234 (257)
T PF12031_consen  155 ENNVDLILATPPFSRLERLFHTLVRLLGMREDQVCREFAVVLLSNLAQGDEAAARAIAMQKPCISHLIAFIEDAEQNAHQ  234 (257)
T ss_pred             ccCcceeeeCCCHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHhcccHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCcCCCCCCCCCCcHHHH
Q psy10178        449 VANQHGIGALRDNPDSMGTSLDML  472 (655)
Q Consensus       449 van~hgi~aL~~~Pe~~gtSv~Ml  472 (655)
                      ++||||+++ ++|||+||||+|||
T Consensus       235 ~~~q~g~~~-~~np~~mgTSvdMl  257 (257)
T PF12031_consen  235 VASQHGMQA-RDNPELMGTSVDML  257 (257)
T ss_pred             HHhhhhhhc-ccCcccCCCCCCcC
Confidence            999999999 89999999999996

This domain is found in eukaryotes. This domain is about 260 amino acids in length. This domain is found associated with PF01388 from PFAM.
>PF12031 DUF3518: Domain of unknown function (DUF3518); InterPro: IPR021906 This presumed domain is functionally uncharacterised Back     alignment and domain information
>KOG1924|consensus Back     alignment and domain information
>KOG1924|consensus Back     alignment and domain information
>KOG1923|consensus Back     alignment and domain information
>KOG1923|consensus Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG1922|consensus Back     alignment and domain information
>COG5178 PRP8 U5 snRNP spliceosome subunit [RNA processing and modification] Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>PRK15319 AIDA autotransporter-like protein ShdA; Provisional Back     alignment and domain information
>PRK15319 AIDA autotransporter-like protein ShdA; Provisional Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>PHA03247 large tegument protein UL36; Provisional Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>KOG1830|consensus Back     alignment and domain information
>PRK15313 autotransport protein MisL; Provisional Back     alignment and domain information
>PRK09752 adhesin; Provisional Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>KOG1925|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query655
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 6e-06
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 6e-05
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 1e-04
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 2e-04
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 2e-04
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 9e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.9 bits (131), Expect = 8e-08
 Identities = 43/323 (13%), Positives = 88/323 (27%), Gaps = 93/323 (28%)

Query: 357 LALEALCK----LCVTDNNV-----------DLVIATPPYARLERLTYVLTRFLCKNEDQ 401
           +AL+  C      C  D  +           + V+       L++L Y +        D 
Sbjct: 166 VALDV-CLSYKVQCKMDFKIFWLNLKNCNSPETVLE-----MLQKLLYQIDPNWTSRSDH 219

Query: 402 VLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNAL-GVANQHGIGAL-- 458
                  N+   + +  + + R +  +     LLV          L  V N     A   
Sbjct: 220 -----SSNIKLRIHSIQAELRRLLKSKPYENCLLV----------LLNVQNAKAWNAFNL 264

Query: 459 --------RDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQ 510
                   R     +   L     T  +L H S       L   + + LL   +      
Sbjct: 265 SCKILLTTRFK--QVTDFLSAATTTHISLDHHS-----MTLTPDEVKSLLLKYLDCRPQD 317

Query: 511 ----------QVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQ---------H 551
                     +  +II+  + +     + N +H + +K   + + S+             
Sbjct: 318 LPREVLTTNPRRLSIIAESI-RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 552 GIGALRDNPDSMGTSLDML---------RRVANQ-HGIGALRDNPDSMGTSLDMLRRTAR 601
            +     +       L ++           V N+ H    +   P     S+  +     
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI----- 431

Query: 602 TLLHLSRHPDNKPLFLQQEQRLL 624
             L L    +N+       + ++
Sbjct: 432 -YLELKVKLENEY---ALHRSIV 450
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query655
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 97.52
3nmz_A458 APC variant protein; protein-protein complex, arma 97.51
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 97.43
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 97.41
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 97.18
3ul1_B 510 Importin subunit alpha-2; arm repeat, armadillo re 97.14
3l6x_A 584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 97.02
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 97.0
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 96.96
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 96.93
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 96.91
1xm9_A 457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 96.8
3tpo_A 529 Importin subunit alpha-2; nuclear import, protein 96.67
1xm9_A 457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 96.56
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 96.56
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 96.51
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 96.49
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 96.44
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 96.43
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 96.35
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 96.32
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 96.23
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 96.2
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 96.03
3nmz_A458 APC variant protein; protein-protein complex, arma 95.85
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 95.54
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 95.24
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 94.93
3ul1_B 510 Importin subunit alpha-2; arm repeat, armadillo re 94.46
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 93.56
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 93.46
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 92.91
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 92.8
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 92.28
3tpo_A 529 Importin subunit alpha-2; nuclear import, protein 91.71
3opb_A 778 SWI5-dependent HO expression protein 4; heat and a 91.64
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 87.78
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 87.3
2j1d_G483 DAAM1, disheveled-associated activator of morphoge 81.48
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
Probab=97.52  E-value=0.001  Score=71.64  Aligned_cols=317  Identities=16%  Similarity=0.142  Sum_probs=178.4

Q ss_pred             hhhccccccCchhhhhcCcchHHHHHHHHHhhhccccccccCCCCCCCCCccccccCCCCccchhhhHHHHHHHhhhhhH
Q psy10178        224 ILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRENVL  303 (655)
Q Consensus       224 IlR~LSFvPgNe~emakh~~lL~iLgrlLlLhheH~~r~~~~~~y~~ed~d~~~~~~~~~~~~~~~Wwwd~l~~LReNaL  303 (655)
                      +|.+|+.-..|...+..+.+.+..|-++|.-.               ++                       ...|.+|.
T Consensus        37 ~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~---------------~~-----------------------~~~~~~A~   78 (644)
T 2z6h_A           37 MVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT---------------ND-----------------------VETARCTA   78 (644)
T ss_dssp             HHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSC---------------CC-----------------------HHHHHHHH
T ss_pred             HHHHHHCCChhHHHHHhccChHHHHHHHHhcC---------------CC-----------------------HHHHHHHH
Confidence            33444444456667778888888888888211               01                       24677888


Q ss_pred             HhhhhccccccccC--CCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCcceeecCCCh
Q psy10178        304 VSLANISGHIDLDQ--YPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPY  381 (655)
Q Consensus       304 VtLaNiagqLDLs~--ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVdliLsTpPf  381 (655)
                      -.|.|++..-+...  +... ..|.|-.+|..        .|+        .=|..|+.+|++++....+.-..+     
T Consensus        79 ~~L~~Ls~~~~~~~~i~~~g-~i~~Lv~lL~~--------~~~--------~v~~~A~~aL~nL~~~~~~~~~~v-----  136 (644)
T 2z6h_A           79 GTLHNLSHHREGLLAIFKSG-GIPALVKMLGS--------PVD--------SVLFYAITTLHNLLLHQEGAKMAV-----  136 (644)
T ss_dssp             HHHHHHTTSHHHHHHHHTTT-HHHHHHHHTTC--------SSH--------HHHHHHHHHHHHHHHHSTTHHHHH-----
T ss_pred             HHHHHHhcChhhHHHHHHcC-CHHHHHHHHhC--------CCH--------HHHHHHHHHHHHHHhCcchhHHHH-----
Confidence            88888876432110  0011 11223233332        121        457899999999998754332222     


Q ss_pred             hhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHH-----HHHHH---------
Q psy10178        382 ARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQA-----EQNAL---------  447 (655)
Q Consensus       382 sRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~-----~~na~---------  447 (655)
                       +-...+..|+++|... +...+..+..+|.+++.++......+. +.++|..|+.+|+..     ..++.         
T Consensus       137 -~~~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~La~~~~~~~~~i~-~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~  213 (644)
T 2z6h_A          137 -RLAGGLQKMVALLNKT-NVKFLAITTDCLQILAYGNQESKLIIL-ASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC  213 (644)
T ss_dssp             -HHTTHHHHHHHGGGCC-CHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTC
T ss_pred             -HHCCChHHHHHHHCcC-CHHHHHHHHHHHHHHHhcCcHHHHHHH-HcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcC
Confidence             2356788899998655 445677788899999987766444443 346799999988632     11111         


Q ss_pred             -----hhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHHHHhhHh
Q psy10178        448 -----GVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ  522 (655)
Q Consensus       448 -----~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RLL~L~mS~ilDs~V~~ilA~vLfe  522 (655)
                           .+.+..++..|-  .-+...+..+.+.|+.+|..|++...........-..|..+..+  -|..|....+.+|..
T Consensus       214 ~~~~~~l~~~g~l~~L~--~ll~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~--~d~~v~~~a~~aL~~  289 (644)
T 2z6h_A          214 SSNKPAIVEAGGMQALG--LHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGS--DDINVVTCAAGILSN  289 (644)
T ss_dssp             TTHHHHHHHTTHHHHHH--TTTTCSCHHHHHHHHHHHHHHGGGCTTCCSCHHHHHHHHHHTTC--SCHHHHHHHHHHHHH
T ss_pred             cccHHHHHHCCCHHHHH--HHHhcCCHHHHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHcC--CCHHHHHHHHHHHHH
Confidence                 111112222221  00111246889999999999998765543333333445555443  366777778888887


Q ss_pred             hccccccchhhhhHHHHhhHhccCccccccccccccCCC--Ccc--------------chHHHHHH-HHhhhhhcccccC
Q psy10178        523 TRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPD--SMG--------------TSLDMLRR-VANQHGIGALRDN  585 (655)
Q Consensus       523 ls~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~--~~~--------------~~~~~~~~-~~~~hg~~al~~~  585 (655)
                      ++.+-..+       +..+++.|-|-  .|+..|.+.++  ..-              ..-..+|. +.+.+|+..|.+-
T Consensus       290 L~~~~~~~-------~~~v~~~g~v~--~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~l  360 (644)
T 2z6h_A          290 LTCNNYKN-------KMMVCQVGGIE--ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL  360 (644)
T ss_dssp             HHTTCHHH-------HHHHHHTTHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHT
T ss_pred             HHcCCHHH-------HHHHHHcCCHH--HHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHH
Confidence            76531111       12234444333  56666654221  000              00012233 4444555544321


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhcCCCCchhhH
Q psy10178        586 PDSMGTSLDMLRRTARTLLHLSRHPDNKPLFL  617 (655)
Q Consensus       586 p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~  617 (655)
                      =. -+.+.++...|+.+|-.|+..++++..++
T Consensus       361 L~-~~~~~~v~~~a~~~L~nLa~~~~~~~~i~  391 (644)
T 2z6h_A          361 LH-PPSHWPLIKATVGLIRNLALCPANHAPLR  391 (644)
T ss_dssp             TS-TTCCHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred             hC-ccCchHHHHHHHHHHHHHccCHHHHHHHH
Confidence            10 01235788888899999999999986665
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query655
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 97.8
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 96.74
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 96.24
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 95.92
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 95.82
d1xm9a1 457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 94.97
d1xm9a1 457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 94.74
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 90.47
d1q1sc_ 434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 88.92
d1wa5b_ 503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 83.13
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: beta-Catenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=0.00093  Score=65.87  Aligned_cols=296  Identities=17%  Similarity=0.131  Sum_probs=169.2

Q ss_pred             HhhhhhHHhhhhccccccccCC-CCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCccee
Q psy10178        297 NIRENVLVSLANISGHIDLDQY-PEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLV  375 (655)
Q Consensus       297 ~LReNaLVtLaNiagqLDLs~y-pesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVdli  375 (655)
                      .++++|.-+|.|++..-+.... -+.-..|.|-.+|+.        .|+        +=+..|+.+|+.+|....+.-..
T Consensus        75 ~~~~~a~~~L~~l~~~~~~~~~i~~~g~i~~Li~lL~~--------~~~--------~v~~~a~~aL~~l~~~~~~~~~~  138 (529)
T d1jdha_          75 ETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGS--------PVD--------SVLFYAITTLHNLLLHQEGAKMA  138 (529)
T ss_dssp             HHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTC--------SCH--------HHHHHHHHHHHHHHHHCTTHHHH
T ss_pred             HHHHHHHHHHHHHhCCchhHHHHHHCCCHHHHHHHhCC--------CCH--------HHHHHHHHHHHHhhcccchhhhH
Confidence            6788899999888654332110 000112434444433        122        46789999999999876664433


Q ss_pred             ecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHH-----HHHHHH-hh
Q psy10178        376 IATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQ-----AEQNAL-GV  449 (655)
Q Consensus       376 LsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~-----~~~na~-~v  449 (655)
                      +      +-.+.+..|+++|. +.++..++.+...|.+++..+.. .+......+.+..|+.++..     ....+. .+
T Consensus       139 ~------~~~g~i~~Lv~lL~-~~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l  210 (529)
T d1jdha_         139 V------RLAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQE-SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVL  210 (529)
T ss_dssp             H------HHHTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred             H------HhcCCchHHHHHHH-ccChHHHHHHHHHHHHHhhhhhH-HHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHH
Confidence            3      35667788899885 45667899999999999988876 44556667789999998853     222222 11


Q ss_pred             -------------hhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHH
Q psy10178        450 -------------ANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAII  516 (655)
Q Consensus       450 -------------an~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RLL~L~mS~ilDs~V~~il  516 (655)
                                   .+..|+..|.  .-+...+..+...|+.+|..++....++......=..|..+..+  -|..|....
T Consensus       211 ~~ls~~~~~~~~~~~~g~~~~L~--~ll~~~~~~~~~~a~~~l~~ls~~~~~~~~~~~~i~~Lv~ll~~--~~~~~~~~a  286 (529)
T d1jdha_         211 KVLSVCSSNKPAIVEAGGMQALG--LHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGS--DDINVVTCA  286 (529)
T ss_dssp             HHHTTSTTHHHHHHHTTHHHHHH--TTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTC--SCHHHHHHH
T ss_pred             hhhhccccccchhhhhhhhhhHH--HHhcccchhhhhhhhhHHHhccccccchhhhhhcchhhhhhccc--ccHHHHHHH
Confidence                         1122222221  11223345788889999999987666554443444556665544  356677777


Q ss_pred             HHhhHhhccccccchhhhhHHHHhhHhccCccccccccccccCCCC----------------ccchHHHH-HHHHhhhhh
Q psy10178        517 SRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDS----------------MGTSLDML-RRVANQHGI  579 (655)
Q Consensus       517 A~vLfels~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~~----------------~~~~~~~~-~~~~~~hg~  579 (655)
                      +.+|..++.+-..++..+.       +.|-+.  .++..+..+.++                -......+ ..+....|+
T Consensus       287 ~~~L~~l~~~~~~~~~~i~-------~~~~i~--~Li~~l~~~~~~~~~~~~a~~aL~~l~~~~~~~~~~~~~i~~~~~l  357 (529)
T d1jdha_         287 AGILSNLTCNNYKNKMMVC-------QVGGIE--ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGL  357 (529)
T ss_dssp             HHHHHHHTTTCHHHHHHHH-------HTTHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCH
T ss_pred             HHHHHhhccchhHHHHHHH-------HhhhHH--HHHHHHHhhhcchhHHHHHHHHhhcccchhhcchhhhhhHHhcccc
Confidence            7888888654333333222       222222  222222110000                00011223 334445555


Q ss_pred             cccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchhhHHHHH--HHHHHHHHH
Q psy10178        580 GALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQ--RLLALVMSQ  630 (655)
Q Consensus       580 ~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~~~e~--RLL~l~mS~  630 (655)
                      ..+..--. -+.+.+....+..+|..|+..++|+..|..+..  .|+++.-+.
T Consensus       358 ~~L~~ll~-~~~~~~~~~~~~~~l~~l~~~~~~~~~l~~~g~i~~L~~lL~~~  409 (529)
T d1jdha_         358 PVVVKLLH-PPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRA  409 (529)
T ss_dssp             HHHHHTTS-TTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHH
T ss_pred             hhHHHHHh-ccchHHHHHHHHHHHhhcchhhhhhhhhhhcccHHHHHHHHhcC
Confidence            55543322 133456777788899999999999998876432  455554443
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure