Psyllid ID: psy10296


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAPEGV
ccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccc
cHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccEEcccccc
MADQLCGYLFlkasgvnteaifpsANIARALATIFSTnvrgfeagsmgavngmkpngdrdrsaiqsEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGlyrrlredrvsgcetapegv
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLyrrlredrvsgcetapegv
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAPEGV
****LCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAG*********************EEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLR**************
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAPE**
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDR***********
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAPE**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAPEGV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query116 2.2.26 [Sep-21-2011]
Q9HCG7927 Non-lysosomal glucosylcer yes N/A 0.879 0.110 0.509 7e-23
Q5M868912 Non-lysosomal glucosylcer yes N/A 0.879 0.111 0.509 2e-22
Q69ZF3918 Non-lysosomal glucosylcer yes N/A 0.879 0.111 0.509 3e-22
Q7KT91948 Non-lysosomal glucosylcer yes N/A 0.982 0.120 0.447 5e-22
>sp|Q9HCG7|GBA2_HUMAN Non-lysosomal glucosylceramidase OS=Homo sapiens GN=GBA2 PE=1 SV=2 Back     alignment and function desciption
 Score =  105 bits (262), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/106 (50%), Positives = 73/106 (68%), Gaps = 4/106 (3%)

Query: 1   MADQLCGYLFLKASGV---NTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNG 57
           M+DQ  G  FLKA G+   +TE +FP+ ++ RAL TIF  NV+ F  G+MGAVNGM+P+G
Sbjct: 750 MSDQCAGQWFLKACGLGEGDTE-VFPTQHVVRALQTIFELNVQAFAGGAMGAVNGMQPHG 808

Query: 58  DRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLRE 103
             D+S++QS+EVW GV Y L+A M+ EG   E + TA G YR + E
Sbjct: 809 VPDKSSVQSDEVWVGVVYGLAATMIQEGLTWEGFQTAEGCYRTVWE 854




Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide. Involved in sphingomyelin generation and prevention of glycolipid accumulation. May also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 5
>sp|Q5M868|GBA2_RAT Non-lysosomal glucosylceramidase OS=Rattus norvegicus GN=Gba2 PE=2 SV=2 Back     alignment and function description
>sp|Q69ZF3|GBA2_MOUSE Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=2 SV=2 Back     alignment and function description
>sp|Q7KT91|C3390_DROME Non-lysosomal glucosylceramidase OS=Drosophila melanogaster GN=CG33090 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query116
443709232 802 hypothetical protein CAPTEDRAFT_186839 [ 0.844 0.122 0.540 3e-25
443710865 449 hypothetical protein CAPTEDRAFT_216398 [ 0.844 0.218 0.540 5e-25
357630375 912 hypothetical protein KGM_16417 [Danaus p 0.862 0.109 0.582 1e-23
328709489 776 PREDICTED: non-lysosomal glucosylceramid 0.836 0.125 0.551 4e-23
339252284 1615 AP-1 complex subunit gamma-1 [Trichinell 0.879 0.063 0.495 1e-22
312382731 777 hypothetical protein AND_04399 [Anophele 0.982 0.146 0.5 2e-22
291241331 792 PREDICTED: hypothetical protein [Saccogl 0.982 0.143 0.495 2e-22
405977906 1464 Non-lysosomal glucosylceramidase [Crasso 0.844 0.066 0.530 2e-22
196002317 843 hypothetical protein TRIADDRAFT_54543 [T 0.844 0.116 0.495 2e-22
395515264 954 PREDICTED: non-lysosomal glucosylceramid 0.879 0.106 0.537 4e-22
>gi|443709232|gb|ELU03988.1| hypothetical protein CAPTEDRAFT_186839 [Capitella teleta] Back     alignment and taxonomy information
 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/98 (54%), Positives = 68/98 (69%)

Query: 1   MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRD 60
           MADQ+CG  FLKA GV   A+FPSAN+ RAL  +F  NV  F+ G MGA+NGM+PN  +D
Sbjct: 651 MADQMCGQWFLKACGVADNAVFPSANVKRALEAVFKHNVLPFDGGRMGAINGMRPNAKKD 710

Query: 61  RSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLY 98
            ++ QS+E WTGVTY L A M+  G +D+ + TA G Y
Sbjct: 711 VTSCQSDEFWTGVTYALGATMIQVGMIDKGFQTAYGAY 748




Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|443710865|gb|ELU04898.1| hypothetical protein CAPTEDRAFT_216398 [Capitella teleta] Back     alignment and taxonomy information
>gi|357630375|gb|EHJ78536.1| hypothetical protein KGM_16417 [Danaus plexippus] Back     alignment and taxonomy information
>gi|328709489|ref|XP_001943760.2| PREDICTED: non-lysosomal glucosylceramidase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|339252284|ref|XP_003371365.1| AP-1 complex subunit gamma-1 [Trichinella spiralis] gi|316968412|gb|EFV52690.1| AP-1 complex subunit gamma-1 [Trichinella spiralis] Back     alignment and taxonomy information
>gi|312382731|gb|EFR28085.1| hypothetical protein AND_04399 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|291241331|ref|XP_002740565.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|405977906|gb|EKC42333.1| Non-lysosomal glucosylceramidase [Crassostrea gigas] Back     alignment and taxonomy information
>gi|196002317|ref|XP_002111026.1| hypothetical protein TRIADDRAFT_54543 [Trichoplax adhaerens] gi|190586977|gb|EDV27030.1| hypothetical protein TRIADDRAFT_54543 [Trichoplax adhaerens] Back     alignment and taxonomy information
>gi|395515264|ref|XP_003761826.1| PREDICTED: non-lysosomal glucosylceramidase [Sarcophilus harrisii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query116
UNIPROTKB|F1STB6921 GBA2 "Non-lysosomal glucosylce 0.965 0.121 0.487 2.2e-21
ZFIN|ZDB-GENE-070522-3851 gba2 "glucosidase, beta (bile 0.974 0.132 0.474 3.1e-21
RGD|1305598912 Gba2 "glucosidase beta 2" [Rat 0.965 0.122 0.487 4.4e-21
UNIPROTKB|Q5M868912 Gba2 "Non-lysosomal glucosylce 0.965 0.122 0.487 4.4e-21
UNIPROTKB|Q9HCG7927 GBA2 "Non-lysosomal glucosylce 0.965 0.120 0.487 4.6e-21
UNIPROTKB|F5H7P6933 GBA2 "Non-lysosomal glucosylce 0.965 0.120 0.487 4.6e-21
UNIPROTKB|J9P6J81081 GBA2 "Uncharacterized protein" 0.965 0.103 0.495 5.8e-21
MGI|MGI:2654325918 Gba2 "glucosidase beta 2" [Mus 0.965 0.122 0.487 7.3e-21
UNIPROTKB|F1MND2926 GBA2 "Non-lysosomal glucosylce 0.974 0.122 0.474 2.6e-20
FB|FBgn0028916948 CG33090 [Drosophila melanogast 0.982 0.120 0.455 7.1e-20
UNIPROTKB|F1STB6 GBA2 "Non-lysosomal glucosylceramidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
 Score = 262 (97.3 bits), Expect = 2.2e-21, P = 2.2e-21
 Identities = 57/117 (48%), Positives = 78/117 (66%)

Query:     1 MADQLCGYLFLKASGV---NTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNG 57
             M+DQ  G  FL+ASG+   +TE +FP+ ++ +AL TIF  NV+ F  G+MGAVNGM+P+G
Sbjct:   750 MSDQCAGQWFLRASGLGEGDTE-VFPTPHVVQALQTIFEFNVQAFAGGAMGAVNGMQPHG 808

Query:    58 DRDRSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDRVSGCETAPE 114
               DRS++QS+EVW GV Y L+A M+ EG   E + TA G YR + E R+      PE
Sbjct:   809 VPDRSSVQSDEVWVGVVYALAATMIQEGLTWEGFRTAEGCYRTVWE-RLGLAFQTPE 864




GO:0005886 "plasma membrane" evidence=IEA
GO:0008422 "beta-glucosidase activity" evidence=IEA
GO:0004348 "glucosylceramidase activity" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0006680 "glucosylceramide catabolic process" evidence=IEA
ZFIN|ZDB-GENE-070522-3 gba2 "glucosidase, beta (bile acid) 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1305598 Gba2 "glucosidase beta 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5M868 Gba2 "Non-lysosomal glucosylceramidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HCG7 GBA2 "Non-lysosomal glucosylceramidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F5H7P6 GBA2 "Non-lysosomal glucosylceramidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9P6J8 GBA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2654325 Gba2 "glucosidase beta 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1MND2 GBA2 "Non-lysosomal glucosylceramidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0028916 CG33090 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q69ZF3GBA2_MOUSE3, ., 2, ., 1, ., 4, 50.50940.87930.1111yesN/A
Q9HCG7GBA2_HUMAN3, ., 2, ., 1, ., 4, 50.50940.87930.1100yesN/A
Q5M868GBA2_RAT3, ., 2, ., 1, ., 4, 50.50940.87930.1118yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query116
pfam04685357 pfam04685, DUF608, Protein of unknown function, DU 1e-30
COG4354721 COG4354, COG4354, Predicted bile acid beta-glucosi 3e-11
>gnl|CDD|218212 pfam04685, DUF608, Protein of unknown function, DUF608 Back     alignment and domain information
 Score =  111 bits (279), Expect = 1e-30
 Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 1   MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRD 60
           MADQL G  + +  G+    +     I  AL +I+  N + F  G  GAVNGM P+G  D
Sbjct: 223 MADQLLGQWYARLLGL--GDVLDEEKIKSALRSIYKYNFKKFLNGEAGAVNGMWPDGSVD 280

Query: 61  RSAIQSEEVWTGVTYLLSAAMLYEGNVDEAWTTAGGLYRRLREDR 105
             ++QS EVWTG+ Y L+A M+ EG V+E    A G+Y R     
Sbjct: 281 TPSVQSLEVWTGIEYALAAHMIQEGMVEEGLKIAKGVYDRYDGRL 325


This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. Length = 357

>gnl|CDD|226800 COG4354, COG4354, Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 116
KOG2119|consensus879 100.0
PF04685365 DUF608: Protein of unknown function, DUF608; Inter 100.0
COG4354721 Predicted bile acid beta-glucosidase [Carbohydrate 100.0
>KOG2119|consensus Back     alignment and domain information
Probab=100.00  E-value=1.4e-45  Score=320.38  Aligned_cols=112  Identities=46%  Similarity=0.752  Sum_probs=110.7

Q ss_pred             ChhhhHHHHHHHhcCCCCCCCCChhHHHHHHHHHHHhhccccCCCccccccCCCCCCCccCCCCCCCcccchHHHHHHHH
Q psy10296          1 MADQLCGYLFLKASGVNTEAIFPSANIARALATIFSTNVRGFEAGSMGAVNGMKPNGDRDRSAIQSEEVWTGVTYLLSAA   80 (116)
Q Consensus         1 maDQL~Gqw~a~~~GL~~~~v~~~~~v~sAL~sI~~~N~~~~~~g~~Ga~Ng~~p~G~~~~~~~qs~EvWtGv~Y~lAa~   80 (116)
                      |||||||||||+.|||+  +|+|++||||||++||++||++|.+|++||||||.|+|+||.+++||+|||+||+|+|||.
T Consensus       688 maDQlaGqWy~~a~gl~--~i~~~~~vrsAL~tIy~~NVm~~~~G~~GAVNGm~p~G~VD~ssiQS~EvW~GvtYalAAt  765 (879)
T KOG2119|consen  688 MADQLAGQWYARACGLP--PIFPEEKVRSALDTIYDFNVMKFKGGRMGAVNGMLPSGKVDTSSIQSREVWAGVTYALAAT  765 (879)
T ss_pred             HHHhHhhHHHHHhcCCC--ccCchHHHHHHHHHHHhhceeeecCCceeccccccCCCccccccceehhhhccHHHHHHHH
Confidence            89999999999999999  9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCChHHHHHHHHHHHHHhHhc--CCccccCCCC
Q psy10296         81 MLYEGNVDEAWTTAGGLYRRLRED--RVSGCETAPE  114 (116)
Q Consensus        81 mi~~G~~eeg~~i~~~~~~~~~~~--~g~~f~tPE~  114 (116)
                      ||++||.|+||++|+++|+++|++  +|++|||||+
T Consensus       766 MIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTPEa  801 (879)
T KOG2119|consen  766 MIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTPEA  801 (879)
T ss_pred             HHHHhhHHhhhhhhhhhHHHHhhhcccceEEECchh
Confidence            999999999999999999999999  7999999997



>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] Back     alignment and domain information
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query116
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 94.11

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00