Psyllid ID: psy10461

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------136

YIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWDQTSDGDVTPAKKKVAAAEWEKEADVNIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAATRWDETPGHPKPGAETPGATPSTRLWDATPGHATPGAATPGRETPSHDKAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

cccccccccccccccccccccccccccccccHHHHcccccccccccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc

cccccccHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccEEEccccccccccHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHcHHHHccccccccccHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcHHccccccEEEHcHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHcccccEEEccccccEEcccccccccccccEEcccccccHcccccccccccHHHHHHHHHHHHHccHHHHHHcccEEEEcccHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcHccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEccHHEEcc

yipirtparkltatptpiagtptgffiqqedktakymdnqpkgnlpflkpedAQYFDKLLsngkhcgktpdvgsRTYAEVMREQLVRGEEKEVRKKLQDKakdgtlkavptngeakaapkkrgrwdqtsdgdvtpaKKKVAAAEWEKEADVNIEAQIRDIQNRKkdvsegggeekqkrvglgesgyfdsdiydgggkfeGYVKSiadddfdyqasfnqnkrsgytapAALLNDIaqsekdydpfadRRQKTVAEKEDEYRAIRRRMIispervdpfaeghlaamtpEQIQAYRWEREidernrpltddeleamfppgykvlqppaghlaamtpEQIQAYRWEREidernrpltddeleamfppgykvlqppagyipirtparkltatptpiagtptgffiqqedktakymdnqpkgnlpflkpedaQYFDKLLvdvdedslspeEAKERKIMKLLLKIKNGTPPMRKAALRQITDKArefgagplfnqilpllmsptledQERHLLVKVIDRILYKLDDLVRPYVHKILVVIepllidedyyARVEGREIISNLAKAAGLATMIStmrpdidniDEYVRNTTARAFAVVASAlgipsllpflkaggvtpaatrwdetpghpkpgaetpgatpstrlwdatpghatpgaatpgretpshdkaqssirrnrwdetpkteretpghssgwaetpktdragpggdliqetptpggvsskrrsrwdetpqatpsgamtpsaatpggmtpstpitphvgstplmtpsgvtptgnkamamatptpghlaamtpEQIQAYRWEREidernrpltddeleamfppgykvlqppaacffigcsmfaptVWHLWIYTrsananfyFGVTLAFATSQIFLLTDLLFAYLKRDYtlengiqktikgkparlvgASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVnqlgkrvkpylpqiCGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIgmtkmtppikdllprltPILKNRHEKVQENCIDLVGRIadrgpeyvsAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAetcspftvlpalmneyrvpelnvqNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYvwpnifetsPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

yipirtparkltatptpiagtptgFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLSngkhcgktpdvgsrtYAEVMReqlvrgeekevRKKLqdkakdgtlkavptngeakaapkkrgrwdqtsdgdvtpaKKKVAaaewekeadvnieaqiRDIQnrkkdvsegggeekqkrvglgesgyfdsDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLNDIAQsekdydpfadrrqktvaekedeyrAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLlkikngtppmRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAATRWDETPGHPKPGAETPGATPSTRLWDATPGHATpgaatpgretpshdkaqssirrnrwdetpkteretpghssgwaetpktdragpggdliqetptpggvsskrrsrwdetpqatpsgamtpsAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLEngiqktikgkparlvgaseiinrvvddlkdeNEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTkmtppikdllPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

YIPIRTPARKLtatptpiagtptgFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWDQTSDGDVTPakkkvaaaewekeaDVNIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLtatptpiagtptgFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAATRWDETPGHPKPGAETPGATPSTRLWDatpghatpgaatpgRETPSHDKAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFellellKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

***********************GFFI**************************QYFDKLL***************************************************************************************************************************SGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFN***********ALL******************************IRRRMIIS***VDPFAEGHLAAMTPEQIQAYRWER********************GYKVLQ***GHLAAMTPEQIQAYRWER***************AMFPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQ************************AQYFDKLLVDV***************MKLLLKI***********LRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAAT**********************************************************************************************************************************************************************************AYRW***************LEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLK********************LGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYV*

YIPIRTPARKLTATPTPIAGTPT***********************FLKPEDAQYFD*****************************************************************************************************************************************************************************************************************************************************************************************************PLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLTATPT*****************************PFLKPEDAQYFDKLLV****************IMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL********************************************************************************************************************************************************************************************************RPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPT****************FGVTLAFATSQIFLLTDLLFAYLKRDYTLENGI*****GKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKS*KVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

YIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPT************************************EADVNIEAQIRDIQ***************KRVGLGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAATRWDETPGHPKPGAETPGATPSTRLWDATPGHAT*********************RNRW*****************AETPKTDRAGPGGDLIQET*********************************GGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNK********ADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

YIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVP*****************************************N*EA*IRDIQNRK**********************F****YDGGGKFEGY*K************************************DYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWERE**********************************************EIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVT************************************************************************************************************************************************GSTP***PSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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YIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLSNGKHCGKTPDVGSRTYAEVMREQLVRGEEKEVRKKLQDKAKDGTLKAVPTNGEAKAAPKKRGRWDQTSDGDVTPAKKKVAAAEWEKEADVNIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQASFNQNKRSGYTAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPTGFFIQQEDKTAKYMDNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAATRWDETPGHPKPGAETPGATPSTRLWDATPGHATPGAATPGRETPSHDKAQSSIRRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQETPTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFPPGYKVLQPPAACFFIGCSMFAPTVWHLWIYTRSANANFYFGVTLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVxxxxxxxxxxxxxxxxxxxxxTMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1359	2.2.26 [Sep-21-2011]
O75533		1304	Splicing factor 3B subuni	yes	N/A	0.340	0.355	0.903	0.0
O57683		1307	Splicing factor 3B subuni	N/A	N/A	0.339	0.352	0.900	0.0
Q99NB9		1304	Splicing factor 3B subuni	yes	N/A	0.340	0.355	0.900	0.0
Q10178		1205	U2 snRNP component prp10	yes	N/A	0.285	0.321	0.679	0.0
P49955		971	U2 snRNP component HSH155	yes	N/A	0.339	0.475	0.538	1e-146
Q8CHJ1		435	Phosphatidylinositol glyc	no	N/A	0.053	0.167	0.472	3e-14
Q8K358		434	Phosphatidylinositol glyc	no	N/A	0.053	0.168	0.472	3e-14
Q9H490		435	Phosphatidylinositol glyc	no	N/A	0.053	0.167	0.472	3e-14
Q8CHJ0		435	Phosphatidylinositol glyc	no	N/A	0.053	0.167	0.459	4e-14
P41733		394	GPI transamidase componen	no	N/A	0.051	0.177	0.337	0.0001

>sp\|O75533\|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3	Back alignment and function desciption

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/464 (90%), Positives = 441/464 (95%)

Query: 896  ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
            A  VGA+EII+R+VDDLKDE EQYRKMVME+IEK M NLGAADID +LEEQLIDGILYAF
Sbjct: 841  ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF 900

Query: 956  QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
            QEQTTED VMLNGFGT+VN LGKRVKPYLPQICGT+LWRLNNKSAKVRQQAADLISR AV
Sbjct: 901  QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV 960

Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
            VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM KMTPPIKDLLPRL
Sbjct: 961  VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL 1020

Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1135
            TPILKNRHEKVQENCIDLVGRIADRG EYVSAREWMRICFELLELLKAHKKAIRRATVNT
Sbjct: 1021 TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1080

Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
            FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1081 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1140

Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
            LNVQNGVLK+LSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA A ++HM+LGVY
Sbjct: 1141 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY 1200

Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
            GFGCED+L HLLNYVWPN+FETSPH++QA M A+EGLRVA+GP R+LQY LQGLFHPARK
Sbjct: 1201 GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK 1260

Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
            VRDVYWKIYNS+YIG QDALI+ YPRI ND KN Y+RYELDY+L
Sbjct: 1261 VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL 1304

Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.
Homo sapiens (taxid: 9606)

>sp\|O57683\|SF3B1_XENLA Splicing factor 3B subunit 1 OS=Xenopus laevis GN=sf3b1 PE=2 SV=1	Back alignment and function description

>sp\|Q99NB9\|SF3B1_MOUSE Splicing factor 3B subunit 1 OS=Mus musculus GN=Sf3b1 PE=1 SV=1	Back alignment and function description

>sp\|Q10178\|SF3B1_SCHPO U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prp10 PE=1 SV=3	Back alignment and function description

>sp\|P49955\|SF3B1_YEAST U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSH155 PE=1 SV=1	Back alignment and function description

>sp\|Q8CHJ1\|PIGU_RAT Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Rattus norvegicus GN=Pigu PE=1 SV=3	Back alignment and function description

>sp\|Q8K358\|PIGU_MOUSE Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Mus musculus GN=Pigu PE=2 SV=4	Back alignment and function description

>sp\|Q9H490\|PIGU_HUMAN Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Homo sapiens GN=PIGU PE=1 SV=3	Back alignment and function description

>sp\|Q8CHJ0\|PIGU_CRIGR Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Cricetulus griseus GN=PIGU PE=1 SV=3	Back alignment and function description

>sp\|P41733\|CDC91_YEAST GPI transamidase component GAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAB1 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1359
189240885		1322	PREDICTED: similar to U2 small nuclear r	0.311	0.320	0.946	0.0
242011533		1336	U2 snRNP component prp10, putative [Pedi	0.339	0.345	0.948	0.0
195437566		1362	GK24416 [Drosophila willistoni] gi\|19416	0.338	0.337	0.946	0.0
399108175		1343	splicing factor 3b subunit 1 [Rhyzoperth	0.341	0.345	0.936	0.0
332021647		1317	Splicing factor 3B subunit 1 [Acromyrmex	0.339	0.350	0.946	0.0
322788435		1303	hypothetical protein SINV_80122 [Solenop	0.339	0.353	0.946	0.0
345489666		1314	PREDICTED: splicing factor 3B subunit 1-	0.326	0.337	0.941	0.0
270013742		1636	hypothetical protein TcasGA2_TC012382 [T	0.338	0.281	0.943	0.0
340712061		1316	PREDICTED: splicing factor 3B subunit 1-	0.301	0.311	0.946	0.0
156542977		1316	PREDICTED: splicing factor 3B subunit 1-	0.326	0.337	0.941	0.0

>gi\|189240885\|ref\|XP_971484.2\| PREDICTED: similar to U2 small nuclear ribonucleoprotein [Tribolium castaneum]	Back alignment and taxonomy information

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/464 (94%), Positives = 451/464 (97%)

Query: 896  ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
            A  VGASEIINR+VDDLKDENEQYRKMVMESIEK M NLGAAD+DSRLEEQLIDGILYAF
Sbjct: 859  ANKVGASEIINRIVDDLKDENEQYRKMVMESIEKIMGNLGAADVDSRLEEQLIDGILYAF 918

Query: 956  QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
            QEQTTEDVVMLNGFGTIVNQLGKRVK YLPQICGTILWRLNNKSAKVRQQAADLISRIAV
Sbjct: 919  QEQTTEDVVMLNGFGTIVNQLGKRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 978

Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
            VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL
Sbjct: 979  VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1038

Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1135
            TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT
Sbjct: 1039 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1098

Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
            FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
Sbjct: 1099 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1158

Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
            LNVQNGVLK+LSFLFEYIGEMGKDYIYAV PLLEDALMDRDLVHRQTACA IKHMALGVY
Sbjct: 1159 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVAPLLEDALMDRDLVHRQTACAAIKHMALGVY 1218

Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
            GFGCEDAL HLLNYVWPNIFETSPHLVQAFMDA+EG+RVALGP++ILQY LQGLFHPARK
Sbjct: 1219 GFGCEDALIHLLNYVWPNIFETSPHLVQAFMDAIEGMRVALGPIKILQYTLQGLFHPARK 1278

Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
            VRDVYWKIYNSLYIGGQDAL++ YPRI ND KN Y+RY++DYVL
Sbjct: 1279 VRDVYWKIYNSLYIGGQDALVAGYPRIANDPKNQYIRYDMDYVL 1322

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|242011533\|ref\|XP_002426503.1\| U2 snRNP component prp10, putative [Pediculus humanus corporis] gi\|212510629\|gb\|EEB13765.1\| U2 snRNP component prp10, putative [Pediculus humanus corporis]	Back alignment and taxonomy information

>gi\|195437566\|ref\|XP_002066711.1\| GK24416 [Drosophila willistoni] gi\|194162796\|gb\|EDW77697.1\| GK24416 [Drosophila willistoni]	Back alignment and taxonomy information

>gi\|399108175\|gb\|AFP20535.1\| splicing factor 3b subunit 1 [Rhyzopertha dominica]	Back alignment and taxonomy information

>gi\|332021647\|gb\|EGI62006.1\| Splicing factor 3B subunit 1 [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|322788435\|gb\|EFZ14106.1\| hypothetical protein SINV_80122 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|345489666\|ref\|XP_001599854.2\| PREDICTED: splicing factor 3B subunit 1-like [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|270013742\|gb\|EFA10190.1\| hypothetical protein TcasGA2_TC012382 [Tribolium castaneum]	Back alignment and taxonomy information

>gi\|340712061\|ref\|XP_003394583.1\| PREDICTED: splicing factor 3B subunit 1-like [Bombus terrestris] gi\|350398721\|ref\|XP_003485287.1\| PREDICTED: splicing factor 3B subunit 1-like [Bombus impatiens]	Back alignment and taxonomy information

>gi\|156542977\|ref\|XP_001602756.1\| PREDICTED: splicing factor 3B subunit 1-like [Nasonia vitripennis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1359
FB\|FBgn0031266		1340	CG2807 [Drosophila melanogaste	0.341	0.346	0.931	0.0
UNIPROTKB\|E1C2C3		1301	SF3B1 "Uncharacterized protein	0.341	0.356	0.890	0.0
UNIPROTKB\|O75533		1304	SF3B1 "Splicing factor 3B subu	0.341	0.355	0.890	0.0
UNIPROTKB\|G3V7T6		1304	Sf3b1 "Splicing factor 3b, sub	0.341	0.355	0.890	0.0
UNIPROTKB\|F1MX61		1304	SF3B1 "Uncharacterized protein	0.341	0.355	0.890	0.0
MGI\|MGI:1932339		1304	Sf3b1 "splicing factor 3b, sub	0.341	0.355	0.887	0.0
UNIPROTKB\|F1SMZ9		1303	SF3B1 "Uncharacterized protein	0.341	0.356	0.886	0.0
ZFIN\|ZDB-GENE-040827-3		1315	sf3b1 "splicing factor 3b, sub	0.341	0.352	0.885	0.0
TAIR\|locus:2173333		1269	AT5G64270 [Arabidopsis thalian	0.348	0.373	0.807	0.0
WB\|WBGene00011605		1322	T08A11.2 [Caenorhabditis elega	0.341	0.350	0.778	0.0

FB\|FBgn0031266 CG2807 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 2245 (795.3 bits), Expect = 0., Sum P(3) = 0.
 Identities = 432/464 (93%), Positives = 444/464 (95%)

Query:   896 ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
             A  VGASEIINRVVDDLKDENEQYRKMVME++EK M NLGAADIDSRLEEQLIDGILYAF
Sbjct:   877 ANKVGASEIINRVVDDLKDENEQYRKMVMETVEKIMGNLGAADIDSRLEEQLIDGILYAF 936

Query:   956 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
             QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV
Sbjct:   937 QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 996

Query:  1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
             VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL
Sbjct:   997 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1056

Query:  1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFXXXXXXKAHKKAIRRATVNT 1135
             TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICF      KAHKKAIRRATVNT
Sbjct:  1057 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1116

Query:  1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
             FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAE+C PFTVLPALMNEYRVPE
Sbjct:  1117 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAESCRPFTVLPALMNEYRVPE 1176

Query:  1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
             LNVQNGVLK+LSFLFEYIGEMGKDYIYAV PLLEDALMDRDLVHRQTAC+ IKHM+LGVY
Sbjct:  1177 LNVQNGVLKSLSFLFEYIGEMGKDYIYAVCPLLEDALMDRDLVHRQTACSAIKHMSLGVY 1236

Query:  1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
             GFGCEDALTHLLNYVWPNIFETSPHLVQAFMD+V+GLRV+LGP++ILQY LQGLFHPARK
Sbjct:  1237 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDSVDGLRVSLGPIKILQYTLQGLFHPARK 1296

Query:  1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
             VRDVYWKIYNSLYIGGQDALI+ YPRI ND KN Y RYELDY L
Sbjct:  1297 VRDVYWKIYNSLYIGGQDALIAGYPRITNDPKNQYERYELDYTL 1340

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS

GO:0005686 "U2 snRNP" evidence=ISS;IDA

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

UNIPROTKB\|E1C2C3 SF3B1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|O75533 SF3B1 "Splicing factor 3B subunit 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V7T6 Sf3b1 "Splicing factor 3b, subunit 1, isoform CRA_b" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MX61 SF3B1 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

MGI\|MGI:1932339 Sf3b1 "splicing factor 3b, subunit 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SMZ9 SF3B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040827-3 sf3b1 "splicing factor 3b, subunit 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

TAIR\|locus:2173333 AT5G64270 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

WB\|WBGene00011605 T08A11.2 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P49955	SF3B1_YEAST	No assigned EC number	0.5387	0.3399	0.4757	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		1359
COG5181		975	COG5181, HSH155, U2 snRNP spliceosome subunit [RNA	0.0
COG5181		975	COG5181, HSH155, U2 snRNP spliceosome subunit [RNA	6e-79
pfam08920		142	pfam08920, SF3b1, Splicing factor 3B subunit 1	5e-31
pfam08920		142	pfam08920, SF3b1, Splicing factor 3B subunit 1	1e-29
pfam06728		373	pfam06728, PIG-U, GPI transamidase subunit PIG-U	1e-11
PRK07764		824	PRK07764, PRK07764, DNA polymerase III subunits ga	1e-06
pfam08920		142	pfam08920, SF3b1, Splicing factor 3B subunit 1	3e-06
PHA03307		1352	PHA03307, PHA03307, transcriptional regulator ICP4	4e-06
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	2e-05
PHA03247		3151	PHA03247, PHA03247, large tegument protein UL36; P	5e-04
pfam08920		142	pfam08920, SF3b1, Splicing factor 3B subunit 1	0.001
PRK14959		624	PRK14959, PRK14959, DNA polymerase III subunits ga	0.002

>gnl\|CDD\|227508 COG5181, HSH155, U2 snRNP spliceosome subunit [RNA processing and modification]	Back alignment and domain information

 Score =  638 bits (1646), Expect = 0.0
 Identities = 239/464 (51%), Positives = 306/464 (65%), Gaps = 2/464 (0%)

Query: 896  ARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAADIDSRLEEQLIDGILYAF 955
            A++ G   +  ++++   DE E YRKM    + +  S LG    D RLEE+L D IL AF
Sbjct: 514  AKMGGDPRVSRKILEYYSDEPEPYRKMNAGLVSRIFSRLGRLGFDERLEERLYDSILNAF 573

Query: 956  QEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAV 1015
            QEQ T   ++L  F T++  L  R KP+L  I  TIL  L +K   VR +AADL+  +A 
Sbjct: 574  QEQDTTVGLILPCFSTVLVSLEFRGKPHLSMIVSTILKLLRSKPPDVRIRAADLMGSLAK 633

Query: 1016 VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL 1075
            V+K C E K +  LG +LYE LGE+YPEVLGSIL A+ +I +V     M PPI  +LP L
Sbjct: 634  VLKACGETKELAKLGNILYENLGEDYPEVLGSILKAICSIYSVHRFRSMQPPISGILPSL 693

Query: 1076 TPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNT 1135
            TPIL+N+H+KV  N I LVG I    PEY+  REWMRICFEL++ LK+  K IRR    T
Sbjct: 694  TPILRNKHQKVVANTIALVGTICMNSPEYIGVREWMRICFELVDSLKSWNKEIRRNATET 753

Query: 1136 FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE 1195
            FG I++AIGP DVL  LLNNLKVQERQ RVCT+VAI+IVAE C PF+VLP LM++Y  PE
Sbjct: 754  FGCISRAIGPQDVLDILLNNLKVQERQQRVCTSVAISIVAEYCGPFSVLPTLMSDYETPE 813

Query: 1196 LNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVY 1255
             NVQNGVLKA+ F+FEYIG+   DY+Y++TPLLEDAL DRD VHRQTA   I+H+ L   
Sbjct: 814  ANVQNGVLKAMCFMFEYIGQASLDYVYSITPLLEDALTDRDPVHRQTAMNVIRHLVLNCP 873

Query: 1256 GFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARK 1315
            G G EDA  HLLN +WPNI E SPH++Q+F + +E     LG   +++YV QGLFHP+  
Sbjct: 874  GTGDEDAAIHLLNLLWPNILEPSPHVIQSFDEGMESFATVLGSGAMMKYVQQGLFHPSST 933

Query: 1316 VRDVYWKIYNSLYIGGQDALISAYPRIQNDMKNVYLRYELDYVL 1359
            VR  YW +YN +Y+   DA++  YP  ++   N  L   L   +
Sbjct: 934  VRKRYWTVYNIMYVFDSDAMVPCYPVEEDL--NPELARTLHICI 975

Length = 975

>gnl\|CDD\|227508 COG5181, HSH155, U2 snRNP spliceosome subunit [RNA processing and modification]	Back alignment and domain information

>gnl\|CDD\|220070 pfam08920, SF3b1, Splicing factor 3B subunit 1	Back alignment and domain information

>gnl\|CDD\|220070 pfam08920, SF3b1, Splicing factor 3B subunit 1	Back alignment and domain information

>gnl\|CDD\|219152 pfam06728, PIG-U, GPI transamidase subunit PIG-U	Back alignment and domain information

>gnl\|CDD\|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	Back alignment and domain information

>gnl\|CDD\|220070 pfam08920, SF3b1, Splicing factor 3B subunit 1	Back alignment and domain information

>gnl\|CDD\|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional	Back alignment and domain information

>gnl\|CDD\|220070 pfam08920, SF3b1, Splicing factor 3B subunit 1	Back alignment and domain information

>gnl\|CDD\|184923 PRK14959, PRK14959, DNA polymerase III subunits gamma and tau; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1359
KOG0213\|consensus		1172		100.0
COG5181		975	HSH155 U2 snRNP spliceosome subunit [RNA processin	100.0
KOG0213\|consensus		1172		100.0
PF08920		144	SF3b1: Splicing factor 3B subunit 1; InterPro: IPR	99.93
COG5181		975	HSH155 U2 snRNP spliceosome subunit [RNA processin	99.91
KOG0211\|consensus		759		99.87
KOG2171\|consensus		1075		99.87
KOG0211\|consensus		759		99.87
PF08920		144	SF3b1: Splicing factor 3B subunit 1; InterPro: IPR	99.78
KOG2023\|consensus		885		99.78
KOG2171\|consensus		1075		99.78
KOG2023\|consensus		885		99.68
KOG1241\|consensus		859		99.62
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	99.53
PRK09687		280	putative lyase; Provisional	99.49
PRK09687		280	putative lyase; Provisional	99.39
KOG1824\|consensus		1233		99.37
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	99.34
KOG1242\|consensus		569		99.25
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	99.25
KOG1241\|consensus		859		99.21
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	99.2
PLN03200		2102	cellulose synthase-interactive protein; Provisiona	99.18
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	99.15
KOG0166\|consensus		514		99.14
PLN03200		2102	cellulose synthase-interactive protein; Provisiona	99.14
KOG1242\|consensus		569		99.13
KOG0166\|consensus		514		99.05
KOG0212\|consensus		675		99.04
KOG1240\|consensus		1431		99.03
PTZ00429		746	beta-adaptin; Provisional	98.96
PTZ00429		746	beta-adaptin; Provisional	98.84
KOG0915\|consensus		1702		98.82
KOG0212\|consensus		675		98.82
KOG1824\|consensus		1233		98.81
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	98.71
PF10508		503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	98.68
KOG0915\|consensus		1702		98.59
KOG2552\|consensus		388		98.52
COG5064		526	SRP1 Karyopherin (importin) alpha [Intracellular t	98.52
PF12348		228	CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi	98.52
PF10508		503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	98.46
TIGR02270		410	conserved hypothetical protein. Members are found	98.43
PF12460		415	MMS19_C: RNAPII transcription regulator C-terminal	98.33
PF12348		228	CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi	98.31
COG1413		335	FOG: HEAT repeat [Energy production and conversion	98.27
KOG1240\|consensus		1431		98.25
KOG2259\|consensus		823		98.13
COG1413		335	FOG: HEAT repeat [Energy production and conversion	98.05
KOG4224\|consensus		550		98.0
TIGR02270		410	conserved hypothetical protein. Members are found	97.97
KOG1060\|consensus		968		97.94
KOG1060\|consensus		968		97.93
KOG2259\|consensus		823		97.92
KOG1943\|consensus		1133		97.9
COG5064		526	SRP1 Karyopherin (importin) alpha [Intracellular t	97.84
KOG1820\|consensus		815		97.8
KOG1061\|consensus		734		97.72
KOG1062\|consensus		866		97.71
KOG1248\|consensus		1176		97.6
PF12460		415	MMS19_C: RNAPII transcription regulator C-terminal	97.58
KOG1020\|consensus		1692		97.57
KOG4224\|consensus		550		97.57
PF05004		309	IFRD: Interferon-related developmental regulator (	97.41
PF12755		97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	97.39
PF12755		97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	97.38
KOG1943\|consensus		1133		97.37
KOG1243\|consensus		690		97.37
KOG1062\|consensus		866		97.31
PF13646		88	HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I	97.29
KOG1059\|consensus		877		97.28
KOG1248\|consensus		1176		97.28
cd00020		120	ARM Armadillo/beta-catenin-like repeats. An approx	97.2
COG5240		898	SEC21 Vesicle coat complex COPI, gamma subunit [In	97.19
KOG1077\|consensus		938		97.17
KOG1991\|consensus		1010		97.12
KOG1991\|consensus		1010		97.1
KOG2025\|consensus		892		97.07
cd00020		120	ARM Armadillo/beta-catenin-like repeats. An approx	97.04
PF11865		160	DUF3385: Domain of unknown function (DUF3385); Int	96.99
KOG2062\|consensus		929		96.97
KOG2032\|consensus		533		96.94
KOG0567\|consensus		289		96.94
KOG4413\|consensus		524		96.91
KOG1820\|consensus		815		96.91
COG5240		898	SEC21 Vesicle coat complex COPI, gamma subunit [In	96.88
PF13646		88	HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I	96.88
PF12717		178	Cnd1: non-SMC mitotic condensation complex subunit	96.87
KOG1059\|consensus		877		96.83
PF05918		556	API5: Apoptosis inhibitory protein 5 (API5); Inter	96.76
PF05004		309	IFRD: Interferon-related developmental regulator (	96.73
PF05918		556	API5: Apoptosis inhibitory protein 5 (API5); Inter	96.73
KOG2032\|consensus		533		96.68
PF13513		55	HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O	96.66
KOG0413\|consensus		1529		96.66
PF04826		254	Arm_2: Armadillo-like; InterPro: IPR006911 This en	96.54
KOG2137\|consensus		700		96.53
PF13513		55	HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O	96.49
PF12717		178	Cnd1: non-SMC mitotic condensation complex subunit	96.49
KOG1058\|consensus		948		96.49
COG5096		757	Vesicle coat complex, various subunits [Intracellu	96.44
KOG4653\|consensus		982		96.41
KOG1020\|consensus		1692		96.31
KOG1078\|consensus		865		96.25
KOG1061\|consensus		734		96.22
KOG1243\|consensus		690		96.15
PF06728		382	PIG-U: GPI transamidase subunit PIG-U; InterPro: I	96.13
KOG2956\|consensus		516		95.97
KOG0891\|consensus		2341		95.96
PF05804		708	KAP: Kinesin-associated protein (KAP)	95.95
KOG4653\|consensus		982		95.95
KOG0168\|consensus		1051		95.84
PF02985		31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	95.72
PF14500		262	MMS19_N: Dos2-interacting transcription regulator	95.62
KOG2956\|consensus		516		95.57
COG5218		885	YCG1 Chromosome condensation complex Condensin, su	95.55
KOG2137\|consensus		700		95.54
KOG1078\|consensus		865		95.51
KOG2021\|consensus		980		95.43
PF05804		708	KAP: Kinesin-associated protein (KAP)	95.4
KOG4535\|consensus		728		95.39
PF01347		618	Vitellogenin_N: Lipoprotein amino terminal region;	95.35
smart00638		574	LPD_N Lipoprotein N-terminal Domain.	95.34
KOG1949\|consensus		1005		95.31
KOG1077\|consensus		938		95.3
KOG0567\|consensus		289		95.28
PF02985		31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	95.25
COG5096		757	Vesicle coat complex, various subunits [Intracellu	95.24
PF01347		618	Vitellogenin_N: Lipoprotein amino terminal region;	95.2
PF05536		543	Neurochondrin: Neurochondrin	95.19
KOG0414\|consensus		1251		95.17
COG5116		926	RPN2 26S proteasome regulatory complex component [	94.94
KOG2022\|consensus		982		94.71
KOG2160\|consensus		342		94.69
KOG1949\|consensus		1005		94.66
KOG1525\|consensus		1266		94.62
PF14500		262	MMS19_N: Dos2-interacting transcription regulator	94.55
KOG2025\|consensus		892		94.44
KOG1967\|consensus		1030		94.43
smart00638		574	LPD_N Lipoprotein N-terminal Domain.	94.43
PF12719		298	Cnd3: Nuclear condensing complex subunits, C-term	94.11
PF10274		183	ParcG: Parkin co-regulated protein; InterPro: IPR0	93.95
COG5095		450	TAF6 Transcription initiation factor TFIID, subuni	93.73
KOG2933\|consensus		334		93.67
KOG4524\|consensus		1014		93.53
PF12719		298	Cnd3: Nuclear condensing complex subunits, C-term	93.52
KOG2062\|consensus		929		93.43
cd00256		429	VATPase_H VATPase_H, regulatory vacuolar ATP synth	93.43
PF08506		370	Cse1: Cse1; InterPro: IPR013713 The exchange of ma	93.38
PF13251		182	DUF4042: Domain of unknown function (DUF4042)	93.19
KOG0413\|consensus		1529		93.02
PF04118		307	Dopey_N: Dopey, N-terminal; InterPro: IPR007249 Do	92.96
KOG1058\|consensus		948		92.79
PF11865		160	DUF3385: Domain of unknown function (DUF3385); Int	92.76
KOG0168\|consensus		1051		92.71
KOG1993\|consensus		978		92.7
KOG1967\|consensus		1030		92.68
KOG2933\|consensus		334		92.67
KOG0392\|consensus		1549		92.54
PF03378		435	CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I	92.52
KOG4413\|consensus		524		92.07
KOG1993\|consensus		978		91.97
PF10274		183	ParcG: Parkin co-regulated protein; InterPro: IPR0	91.74
PF13251		182	DUF4042: Domain of unknown function (DUF4042)	91.35
KOG2274\|consensus		1005		91.23
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	91.01
PF01603		409	B56: Protein phosphatase 2A regulatory B subunit (	90.72
COG5218		885	YCG1 Chromosome condensation complex Condensin, su	90.7
PF08506		370	Cse1: Cse1; InterPro: IPR013713 The exchange of ma	90.63
PF12054		441	DUF3535: Domain of unknown function (DUF3535); Int	90.63
COG5116		926	RPN2 26S proteasome regulatory complex component [	89.98
PF04826		254	Arm_2: Armadillo-like; InterPro: IPR006911 This en	89.9
KOG0392\|consensus		1549		89.71
cd08050		343	TAF6 TATA Binding Protein (TBP) Associated Factor	89.44
KOG0891\|consensus		2341		89.37
KOG4524\|consensus		1014		89.34
KOG1822\|consensus		2067		89.23
PF12074		339	DUF3554: Domain of unknown function (DUF3554); Int	89.07
COG5098		1128	Chromosome condensation complex Condensin, subunit	88.62
PF10521		282	DUF2454: Protein of unknown function (DUF2454); In	88.43
KOG2011\|consensus		1048		88.32
KOG2759\|consensus		442		87.99
KOG4535\|consensus		728		87.62
KOG1992\|consensus		960		87.04
PF03224		312	V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004	86.87
KOG2549\|consensus		576		86.62
KOG1517\|consensus		1387		86.13
KOG2274\|consensus		1005		86.03
PF04118		307	Dopey_N: Dopey, N-terminal; InterPro: IPR007249 Do	85.89
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	85.86
KOG1822\|consensus		2067		85.54
KOG1525\|consensus		1266		84.9
cd00256		429	VATPase_H VATPase_H, regulatory vacuolar ATP synth	84.87
PF12530		234	DUF3730: Protein of unknown function (DUF3730) ; I	84.78
KOG1517\|consensus		1387		84.58
KOG4500\|consensus		604		84.33
KOG0414\|consensus		1251		83.77
PF10363		92	DUF2435: Protein of unknown function (DUF2435)	83.56
PF08167		165	RIX1: rRNA processing/ribosome biogenesis	82.9
cd08050		343	TAF6 TATA Binding Protein (TBP) Associated Factor	82.22
KOG1222\|consensus		791		82.16
PF13001		501	Ecm29: Proteasome stabiliser; InterPro: IPR024372	81.39

>KOG0213\|consensus	Back alignment and domain information

Probab=100.00  E-value=2.3e-265  Score=2273.92  Aligned_cols=1075  Identities=65%  Similarity=0.987  Sum_probs=1020.1

Q ss_pred             hhHHHHHHHHHHHhhcccccCCCCcccccccCCCCCccccccccCCCCCcccccccCCCCchhhhhh----cccccCCCc
Q psy10461        149 ADVNIEAQIRDIQNRKKDVSEGGGEEKQKRVGLGESGYFDSDIYDGGGKFEGYVKSIADDDFDYQAS----FNQNKRSGY  224 (1359)
Q Consensus       149 ~~~~i~~~i~~~q~~~~~~~~~~~~~~~~~~~~~~~~~fD~diYg~~~~~~~y~tsI~~~~dd~~~~----~~~~l~~sY  224 (1359)
                      ++.+ |.|+|++|++|+.+.               +|+||+||||+++. ++|++||+++++++.+.    ...|+..+|
T Consensus         7 ~~~~-e~~~~~~~~~~~~~~---------------~~~~d~~~y~~~~~-~~y~~si~~~~~~~~d~d~~~~~~q~~~~y   69 (1172)
T KOG0213|consen    7 LRAE-ELQRRQIEAKKASLT---------------GGQFDADLYGSSDP-ESYSTSIAANEADDVDEDSTPLVGQKSTPY   69 (1172)
T ss_pred             chHH-HHHHHHHHHHhhhhh---------------cCccchhhhCCCCh-hhcccccccccccccccccccccccccCcc
Confidence            4455 889999998777665               38999999999887 89999999999664332    355888999


Q ss_pred             cCCHHHHHHHhhhccCCCchhhhhhhHHhhhhhHHHHHHhhhccCCCCCCccccccc-----cccChhh-----------
Q psy10461        225 TAPAALLNDIAQSEKDYDPFADRRQKTVAEKEDEYRAIRRRMIISPERVDPFAEGHL-----AAMTPEQ-----------  288 (1359)
Q Consensus       225 TaP~~l~~el~~~~e~~Dp~~~~~~k~I~~RE~dY~kRR~~R~lSP~r~DpFa~~~~-----~dvM~e~-----------  288 (1359)
                      ++|..+++|.++..+++||+++++.++|++||++||+||++|++||+|.|||++.+.     .|+|+|+           
T Consensus        70 ~~p~~~l~e~a~~~e~~d~~~~~~~~~i~~re~~y~~~r~~~~~sp~r~d~f~~~~~d~rty~~~mre~~l~~e~~~~~~  149 (1172)
T KOG0213|consen   70 TAPESLLNEVARIEEEYDPMAEKRTKTIADREDEYHKRRRDRQISPDRVDAFADKTPDGRTYTDVMREQMLEKEEREVRR  149 (1172)
T ss_pred             cchHHHHHHhhhhccccChhhhccccchhhhhhHHHHHhhccccCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999888899999999999999999999999999999999999998543     7899985           


Q ss_pred             -------------------------------hhhhhhccccc------------------cCCCCCCccccccC------
Q psy10461        289 -------------------------------IQAYRWEREID------------------ERNRPLTDDELEAM------  313 (1359)
Q Consensus       289 -------------------------------~rk~~~~~~~~------------------~~~~~~~~~~~~~~------  313 (1359)
                                                     -|++|||..++                  ..+|+||||++|..      
T Consensus       150 ~l~~~~k~g~~~~~~~~~~~~~~~~t~~a~~prrnrwdetp~~~t~~~~~~~~~~e~tp~~~KrrSrWDe~p~~s~~~~t  229 (1172)
T KOG0213|consen  150 ELAEKAKEGEEHSTSQPKKRLEANNTASAATPRRNRWDETPPGVTPVATRMEDKGEDTPRSTKRRSRWDETPNASRGNVT  229 (1172)
T ss_pred             HHHHHhhhhhhhcccCchhccCCCccccccCccccccccCCCCCCCCCCccccccCcCccccchhhhccCCcccccccCC
Confidence                                           14566776552                  12567889998843      


Q ss_pred             ---CCCCccccCCCCCCCCCCCHHHHHHhhHHHhhhccCCCCChHHhhhcCC-CCCeecCCCCCCCCCCCccccccCCCC
Q psy10461        314 ---FPPGYKVLQPPAGHLAAMTPEQIQAYRWEREIDERNRPLTDDELEAMFP-PGYKVLQPPAGYIPIRTPARKLTATPT  389 (1359)
Q Consensus       314 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~p~~~~~~~~~~~~~~~~~~  389 (1359)
                         .+||.  .||........||..++.+|||++++++||++||||||+++| +||+++.||++|.|++||  ||+++|+
T Consensus       230 ~~~~tP~~--~t~~g~~~~~~tp~~l~~~RwE~~l~~~~R~~~~eeld~~~p~~gy~~l~pp~~y~~i~tp--kl~~~~t  305 (1172)
T KOG0213|consen  230 PWEVTPGT--ATPIGRLKWDQTPTPLGYIRWEKDLWSRNRPLTDEELDALFPDSGYKVLYPPMGYREIRTP--KLMATPT  305 (1172)
T ss_pred             cceecCCC--cCcccccccccCCcccceeehhhhcccccCCCchhhhhhhcCcccccccCCCcccccccch--hhhcCCc
Confidence               12211  122211233456666788999999999999999999999999 999999999999999999  9999999


Q ss_pred             CCCCCCCcccccccccccccc--CCCCCCCCCCCChhhHHhHHHhccCCCCCCCCHHHHHHHHHHHHHHhccCCChHHHH
Q psy10461        390 PIAGTPTGFFIQQEDKTAKYM--DNQPKGNLPFLKPEDAQYFDKLLVDVDEDSLSPEEAKERKIMKLLLKIKNGTPPMRK  467 (1359)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~ikng~~~~rk  467 (1359)
                      |..    ||+||+++...+..  +..|.++|+||||||.|||++++++.+++.|++||.|||+||+||||||||+|+|||
T Consensus       306 p~~----g~~~~~e~~~~k~~~~~~~g~~~l~flkpeD~~yf~~ll~d~~e~~L~~~e~kEr~i~~llLkvKNG~ppmRk  381 (1172)
T KOG0213|consen  306 PAR----GFHMPQEDRPEKYVDYDPHGYAGLPFLKPEDLQYFADLLKDFDEPLLEDEEGKERKIMRLLLKVKNGTPPMRK  381 (1172)
T ss_pred             ccc----cccccccccccccccCCCCCcCCCCcCChhhHHHHHHHHhhcChhhcCcccccHHHHHHHHHhhcCCCchhHH
Confidence            984    69999998877654  455677999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCcchhhhhhhhhcCCChhhhhhHHHHHHHHHHHHhhcccccccchhhheeecccccccchhhhhhh
Q psy10461        468 AALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG  547 (1359)
Q Consensus       468 ~~~r~~~~~~~~~g~~~~f~~~~p~~~~~~l~~~erh~~~k~~~r~~~~l~~~~~~~~~~il~~~~p~l~~~~~~~r~~~  547 (1359)
                      .||||||||||+|||+||||||||+||||+||||||||||||||||||||||+||||||||||||+|||||||||+|+||
T Consensus       382 ~~LR~ltdkar~~ga~~lfnqiLpllMs~tLeDqerhllVkvidriLyklDdlvrpYVhkILvViepllided~yar~eg  461 (1172)
T KOG0213|consen  382 SALRILTDKARNFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG  461 (1172)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHcCccccchhhhhHHHHHHHHHHhhcccchhceeeeEEEeecceecchHHHhhch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhHHHHHHhcCCCCCCchhHHHhhhhhHHHHHHhhcCcccchhhhhccCCCCCccccccCCCCCCCCCCC
Q psy10461        548 REIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAGGVTPAATRWDETPGHPKPGAET  627 (1359)
Q Consensus       548 r~ii~~l~~~~g~~~~~~~~r~d~~~~d~~vrn~~~r~~avv~~~~g~~~~~pfl~a~~~~~s~~~w~~~~~~~~~~~~~  627 (1359)
                      |||||||+||+|||+|||+|||||||.||||||||||||||||+|||||+||||||||  |+|||||++|  ||      
T Consensus       462 reIisnLakaaGla~mistmrpDidn~deYVRnttarafavvasalgip~llpfLkav--c~SkkSwqaR--hT------  531 (1172)
T KOG0213|consen  462 REIISNLAKAAGLATMISTMRPDIDNKDEYVRNTTARAFAVVASALGIPALLPFLKAV--CGSKKSWQAR--HT------  531 (1172)
T ss_pred             HHHHHHHHHHhhhHHHHHhhcCCcccccHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH--hccccchhhh--ch------
Confidence            9999999999999999999999999999999999999999999999999999999999  9999999999  99      


Q ss_pred             CCCccccccccCCCCCCCCCccCCCCCCCCCCccchhc-cccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCcccC
Q psy10461        628 PGATPSTRLWDATPGHATPGAATPGRETPSHDKAQSSI-RRNRWDETPKTERETPGHSSGWAETPKTDRAGPGGDLIQET  706 (1359)
Q Consensus       628 ~g~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~-~~~rwDetp~~~~~~~~~~~~w~~tp~~~~~~~~~~~~~~~  706 (1359)
                       ||+++           ||||+++||+++||++++++| .+++-||+++++.                            
T Consensus       532 -gIkiv-----------qqIail~Gcsvlphl~~lv~ii~~gl~De~qkVR~----------------------------  571 (1172)
T KOG0213|consen  532 -GIKIV-----------QQIAILSGCSVLPHLKPLVKIIEHGLKDEQQKVRT----------------------------  571 (1172)
T ss_pred             -hhHHH-----------HHHHHHhcchhhhhhHHHHHHHHHhhcccchhhhh----------------------------
Confidence             99999           999999999999999999999 9999999988865                            


Q ss_pred             CCCCCCCCcccCccccCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccchhhhccCCCCccc-cCC
Q psy10461        707 PTPGGVSSKRRSRWDETPQATPSGAMTPSAATPGGMTPSTPITPHVGSTPLMTPSGVTPTGNKAMAMATPTPGHLA-AMT  785 (1359)
Q Consensus       707 ~~~~~~~~~rrSrwd~Tp~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~p~~tp~G~~~~~~~~~~~~~p~~g~~~-~m~  785 (1359)
                                       .+|+++|+ ++++++||||+.|++|+     .|+|  .|+..|+|+.++.|++++|+++ +|+
T Consensus       572 -----------------itAlalsa-laeaa~Pygie~fDsVl-----kpLw--kgir~hrgk~laafLkAigyliplmd  626 (1172)
T KOG0213|consen  572 -----------------ITALALSA-LAEAATPYGIEQFDSVL-----KPLW--KGIRQHRGKELAAFLKAIGYLIPLMD  626 (1172)
T ss_pred             -----------------HHHHHHHH-HHHhcCCcchHHHHHHH-----HHHH--HHHHHccChHHHHHHHHHhhcccccc
Confidence                             88999999 99999999999999999     9999  9999999999999999999998 999


Q ss_pred             HHHHHHHHHhhh-hhccCCCCChHHHHhhcCCCceecCCCccccccc-------cccccchhhhhhhccCCCCCCcccch
Q psy10461        786 PEQIQAYRWERE-IDERNRPLTDDELEAMFPPGYKVLQPPAACFFIG-------CSMFAPTVWHLWIYTRSANANFYFGV  857 (1359)
Q Consensus       786 pe~~~~~~~e~~-i~~rnf~~~DEEm~ki~p~glkVV~~p~~~~~~~-------~~lL~P~f~~lWi~~~sgNANFyyai  857 (1359)
                      +|++++|++|.| |..|+|.++||||+|++   ||||++  ||.+++       ..+++.||++||.++ +         
T Consensus       627 ~eya~yyTrevmlil~rEf~sPDeemkkiv---LKVv~q--cc~t~Gv~~~y~r~dilp~ff~~fw~rr-m---------  691 (1172)
T KOG0213|consen  627 AEYASYYTREVMLILIREFGSPDEEMKKIV---LKVVKQ--CCATDGVEPAYIRFDILPEFFFSFWGRR-M---------  691 (1172)
T ss_pred             HHHHHHhHHHHHHHHHHhhCCChHHHHHHH---HHHHHH--HhcccCCCHHHHhhhhhHHHHhhhhhhh-h---------
Confidence            999999999998 99999999999999999   999999  999877       667889999999988 7         


Q ss_pred             hhhhhhhhHHHHHhhHHHhhhhhhhhcccccccccCccccccChHhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcCcc
Q psy10461        858 TLAFATSQIFLLTDLLFAYLKRDYTLENGIQKTIKGKPARLVGASEIINRVVDDLKDENEQYRKMVMESIEKTMSNLGAA  937 (1359)
Q Consensus       858 ~LV~~~lq~~k~~Dl~~A~~~~d~kl~~~Vettvk~~LA~klg~~eiI~~Ll~~LKDes~~VR~~Aa~~L~~Ia~~LGpe  937 (1359)
                                       |+||+.|+.+  |++||  +||+|+|+.++|.+++..+||+++++|+|+++++++|...+|..
T Consensus       692 -----------------A~drr~ykql--v~ttv--~ia~KvG~~~~v~R~v~~lkde~e~yrkm~~etv~ri~~~lg~~  750 (1172)
T KOG0213|consen  692 -----------------ALDRRNYKQL--VDTTV--EIAAKVGSDPIVSRVVLDLKDEPEQYRKMVAETVSRIVGRLGAA  750 (1172)
T ss_pred             -----------------hccccchhhH--HHHHH--HHHHHhCchHHHHHHhhhhccccHHHHHHHHHHHHHHHhccccc
Confidence                             9999999999  99999  99999999999999999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHhhccCchhHHHHHHHHHHHHhhcccccccchHhHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10461        938 DIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVM 1017 (1359)
Q Consensus       938 ~l~~~L~~~Lld~LLplLqd~~~eD~v~lkaLg~Lae~Lg~~ikPyl~qILpiIl~LL~Des~~VR~aAAe~Is~LA~vl 1017 (1359)
                      +++++++++++++++++||+++.+|.+++.+||.+++.+|.+++||+++|++.++|+|+++++.||++||+++++||.+|
T Consensus       751 diderleE~lidgil~Afqeqtt~d~vml~gfg~V~~~lg~r~kpylpqi~stiL~rLnnksa~vRqqaadlis~la~Vl  830 (1172)
T KOG0213|consen  751 DIDERLEERLIDGILYAFQEQTTEDSVMLLGFGTVVNALGGRVKPYLPQICSTILWRLNNKSAKVRQQAADLISSLAKVL  830 (1172)
T ss_pred             cccHHHHHHHHHHHHHHHHhcccchhhhhhhHHHHHHHHhhccccchHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHhHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHhCCCCCCCchhchHHHHHHHhcCCCHHHHHHHHHHHHHH
Q psy10461       1018 KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI 1097 (1359)
Q Consensus      1018 ~~~~e~~lL~~Ll~iLle~L~De~pEVl~siL~AL~aIa~vlG~~~lsp~l~~lLP~L~~LLkDr~~rVR~AAielIg~I 1097 (1359)
                      +.|+++.+|.+++.+|+|+|+++||||+.+|++|+.+|++++|+..|+||++++||+|++||+|+|.+|+++||+++|.|
T Consensus       831 ktc~ee~~m~~lGvvLyEylgeeypEvLgsILgAikaI~nvigm~km~pPi~dllPrltPILknrheKVqen~IdLvg~I  910 (1172)
T KOG0213|consen  831 KTCGEEKLMGHLGVVLYEYLGEEYPEVLGSILGAIKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGTI  910 (1172)
T ss_pred             HhccHHHHHHHhhHHHHHhcCcccHHHHHHHHHHHHHHHHhccccccCCChhhhcccchHhhhhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhCchhHHHHHHHhhhcccchhHHHHHHHHHHHhhh
Q psy10461       1098 ADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1177 (1359)
Q Consensus      1098 A~~g~e~v~~kE~mrIc~eLLelLkD~~~sVR~AAv~tLg~IAk~~GpedVlp~LL~~Lk~qe~~VRv~ta~AIg~LAea 1177 (1359)
                      |++|++|++.+||||||++|+++|+.|+++||++|+++||.||+++||++|+..|++||++|+++.|+|+++||+++|++
T Consensus       911 adrgpE~v~aREWMRIcfeLlelLkahkK~iRRaa~nTfG~IakaIGPqdVLatLlnnLkvqeRq~RvcTtvaIaIVaE~  990 (1172)
T KOG0213|consen  911 ADRGPEYVSAREWMRICFELLELLKAHKKEIRRAAVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET  990 (1172)
T ss_pred             HhcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhcCHHHHHHHHHhcchHHHHHhchhhhhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccccHHHHHHhcCCCCchhHHHHHHHHHHHHHHhhhhchhhHHhHHHHHHHHHhccChHHHHHHHHHHHHHHhhhcCC
Q psy10461       1178 CSPFTVLPALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTACATIKHMALGVYGF 1257 (1359)
Q Consensus      1178 ~gP~~VLPaLLnlLkDpE~nVR~~VlkaLs~Iae~IG~~~kdYL~~VlPlLedaL~D~D~~VRqtA~saIk~LAl~~~gl 1257 (1359)
                      ||||+|||+|||.|+.|+.|||++|+|+|+|+|+++|+++++|+|.|+|+|+|++||+|.+|||+|+++|+||+++|+++
T Consensus       991 c~pFtVLPalmneYrtPe~nVQnGVLkalsf~FeyigemskdYiyav~PlleDAlmDrD~vhRqta~~~I~Hl~Lg~~g~ 1070 (1172)
T KOG0213|consen  991 CGPFTVLPALMNEYRTPEANVQNGVLKALSFMFEYIGEMSKDYIYAVTPLLEDALMDRDLVHRQTAMNVIKHLALGVPGT 1070 (1172)
T ss_pred             cCchhhhHHHHhhccCchhHHHHhHHHHHHHHHHHHHHHhhhHHHHhhHHHHHhhccccHHHHHHHHHHHHHHhcCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhHHhhhHHhhhcccccCChHHHHHHHHHHHHHHHhhchHHHHHhHhhhhccccccchhhHHHHHHhhhhccccchhh
Q psy10461       1258 GCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPVRILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDALIS 1337 (1359)
Q Consensus      1258 G~EdaliHlLnlvlPnI~Etsp~Vi~~ileaLeaLr~aLG~~~ll~~vLpgLfhpA~kvrd~~WRvyn~~y~~~~~Alv~ 1337 (1359)
                      ||||+++||||++||||+|++|||++++++|+|+++.+||+..+++|+||||||||++||+.||++||++|+++|||||+
T Consensus      1071 g~eda~iHLLN~iWpNIle~sPhviqa~~e~~eg~r~~Lg~~~~~~Y~~QGLFHParkVR~~yw~vyn~my~~~~dalv~ 1150 (1172)
T KOG0213|consen 1071 GCEDALIHLLNLIWPNILETSPHVIQAFDEAMEGLRVALGPQAMLKYCLQGLFHPARKVRKRYWTVYNSMYHGSQDALVA 1150 (1172)
T ss_pred             CcHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHHHHhchHHHHHHHHHhccCcHHHHHHHHHHHHHhHhhcccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCcccccccccccccC
Q psy10461       1338 AYPRIQNDMKNVYLRYELDYVL 1359 (1359)
Q Consensus      1338 ~~P~l~~~~~~~~~~~~l~~~~ 1359 (1359)
                      +||...++.+|.|.|+||||+|
T Consensus      1151 ~ypv~ed~p~n~y~~~eld~~l 1172 (1172)
T KOG0213|consen 1151 CYPVEEDDPENAYYRYELDYVL 1172 (1172)
T ss_pred             ccccCCCCcchhhhhhhhcccC
Confidence            9999999999999999999986

>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification]	Back alignment and domain information

>KOG0213\|consensus	Back alignment and domain information

>PF08920 SF3b1: Splicing factor 3B subunit 1; InterPro: IPR015016 This group of proteins consists of several eukaryotic splicing factor 3B subunit 1 proteins, which associate with p14 through a C terminus beta-strand that interacts with beta-3 of the p14 RNA recognition motif (RRM) beta-sheet, which is in turn connected to an alpha-helix by a loop that makes extensive contacts with both the shorter C-terminal helix and RRM of p14

Back alignment and domain information

>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification]	Back alignment and domain information

>KOG0211\|consensus	Back alignment and domain information

>KOG2171\|consensus	Back alignment and domain information

>KOG0211\|consensus	Back alignment and domain information

Back alignment and domain information

>KOG2023\|consensus	Back alignment and domain information

>KOG2171\|consensus	Back alignment and domain information

>KOG2023\|consensus	Back alignment and domain information

>KOG1241\|consensus	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>PRK09687 putative lyase; Provisional	Back alignment and domain information

>PRK09687 putative lyase; Provisional	Back alignment and domain information

>KOG1824\|consensus	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>KOG1242\|consensus	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG1241\|consensus	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>PLN03200 cellulose synthase-interactive protein; Provisional	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>KOG0166\|consensus	Back alignment and domain information

>PLN03200 cellulose synthase-interactive protein; Provisional	Back alignment and domain information

>KOG1242\|consensus	Back alignment and domain information

>KOG0166\|consensus	Back alignment and domain information

>KOG0212\|consensus	Back alignment and domain information

>KOG1240\|consensus	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>KOG0915\|consensus	Back alignment and domain information

>KOG0212\|consensus	Back alignment and domain information

>KOG1824\|consensus	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells	Back alignment and domain information

>KOG0915\|consensus	Back alignment and domain information

>KOG2552\|consensus	Back alignment and domain information

>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]	Back alignment and domain information

>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]	Back alignment and domain information

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells	Back alignment and domain information

>TIGR02270 conserved hypothetical protein	Back alignment and domain information

>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins	Back alignment and domain information

>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]	Back alignment and domain information

>COG1413 FOG: HEAT repeat [Energy production and conversion]	Back alignment and domain information

>KOG1240\|consensus	Back alignment and domain information

>KOG2259\|consensus	Back alignment and domain information

>COG1413 FOG: HEAT repeat [Energy production and conversion]	Back alignment and domain information

>KOG4224\|consensus	Back alignment and domain information

>TIGR02270 conserved hypothetical protein	Back alignment and domain information

>KOG1060\|consensus	Back alignment and domain information

>KOG1060\|consensus	Back alignment and domain information

>KOG2259\|consensus	Back alignment and domain information

>KOG1943\|consensus	Back alignment and domain information

>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG1820\|consensus	Back alignment and domain information

>KOG1061\|consensus	Back alignment and domain information

>KOG1062\|consensus	Back alignment and domain information

>KOG1248\|consensus	Back alignment and domain information

>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins	Back alignment and domain information

>KOG1020\|consensus	Back alignment and domain information

>KOG4224\|consensus	Back alignment and domain information

>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 []	Back alignment and domain information

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	Back alignment and domain information

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	Back alignment and domain information

>KOG1943\|consensus	Back alignment and domain information

>KOG1243\|consensus	Back alignment and domain information

>KOG1062\|consensus	Back alignment and domain information

>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A	Back alignment and domain information

>KOG1059\|consensus	Back alignment and domain information

>KOG1248\|consensus	Back alignment and domain information

>cd00020 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG1077\|consensus	Back alignment and domain information

>KOG1991\|consensus	Back alignment and domain information

>KOG1991\|consensus	Back alignment and domain information

>KOG2025\|consensus	Back alignment and domain information

>cd00020 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>PF11865 DUF3385: Domain of unknown function (DUF3385); InterPro: IPR024585 This uncharacterised domain is is typically between 160 to 172 amino acids in length	Back alignment and domain information

>KOG2062\|consensus	Back alignment and domain information

>KOG2032\|consensus	Back alignment and domain information

>KOG0567\|consensus	Back alignment and domain information

>KOG4413\|consensus	Back alignment and domain information

>KOG1820\|consensus	Back alignment and domain information

>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]	Back alignment and domain information

>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A	Back alignment and domain information

>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1	Back alignment and domain information

>KOG1059\|consensus	Back alignment and domain information

>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms	Back alignment and domain information

>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 []	Back alignment and domain information

>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms	Back alignment and domain information

>KOG2032\|consensus	Back alignment and domain information

>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B	Back alignment and domain information

>KOG0413\|consensus	Back alignment and domain information

>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function	Back alignment and domain information

>KOG2137\|consensus	Back alignment and domain information

>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B	Back alignment and domain information

>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1	Back alignment and domain information

>KOG1058\|consensus	Back alignment and domain information

>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG4653\|consensus	Back alignment and domain information

>KOG1020\|consensus	Back alignment and domain information

>KOG1078\|consensus	Back alignment and domain information

>KOG1061\|consensus	Back alignment and domain information

>KOG1243\|consensus	Back alignment and domain information

>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase	Back alignment and domain information

>KOG2956\|consensus	Back alignment and domain information

>KOG0891\|consensus	Back alignment and domain information

>PF05804 KAP: Kinesin-associated protein (KAP)	Back alignment and domain information

>KOG4653\|consensus	Back alignment and domain information

>KOG0168\|consensus	Back alignment and domain information

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []	Back alignment and domain information

>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II	Back alignment and domain information

>KOG2956\|consensus	Back alignment and domain information

>COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning]	Back alignment and domain information

>KOG2137\|consensus	Back alignment and domain information

>KOG1078\|consensus	Back alignment and domain information

>KOG2021\|consensus	Back alignment and domain information

>PF05804 KAP: Kinesin-associated protein (KAP)	Back alignment and domain information

>KOG4535\|consensus	Back alignment and domain information

>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 []	Back alignment and domain information

>smart00638 LPD_N Lipoprotein N-terminal Domain	Back alignment and domain information

>KOG1949\|consensus	Back alignment and domain information

>KOG1077\|consensus	Back alignment and domain information

>KOG0567\|consensus	Back alignment and domain information

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []	Back alignment and domain information

>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]	Back alignment and domain information

>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 []	Back alignment and domain information

>PF05536 Neurochondrin: Neurochondrin	Back alignment and domain information

>KOG0414\|consensus	Back alignment and domain information

>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG2022\|consensus	Back alignment and domain information

>KOG2160\|consensus	Back alignment and domain information

>KOG1949\|consensus	Back alignment and domain information

>KOG1525\|consensus	Back alignment and domain information

>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II	Back alignment and domain information

>KOG2025\|consensus	Back alignment and domain information

>KOG1967\|consensus	Back alignment and domain information

>smart00638 LPD_N Lipoprotein N-terminal Domain	Back alignment and domain information

>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain	Back alignment and domain information

>PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter	Back alignment and domain information

>COG5095 TAF6 Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA) [Transcription]	Back alignment and domain information

>KOG2933\|consensus	Back alignment and domain information

>KOG4524\|consensus	Back alignment and domain information

>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain	Back alignment and domain information

>KOG2062\|consensus	Back alignment and domain information

>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments	Back alignment and domain information

>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane	Back alignment and domain information

>PF13251 DUF4042: Domain of unknown function (DUF4042)	Back alignment and domain information

>KOG0413\|consensus	Back alignment and domain information

>PF04118 Dopey_N: Dopey, N-terminal; InterPro: IPR007249 DopA is the founding member of the Dopey family and is required for correct cell morphology and spatiotemporal organisation of multicellular structures in the filamentous fungus Emericella nidulans (Aspergillus nidulans)	Back alignment and domain information

>KOG1058\|consensus	Back alignment and domain information

>PF11865 DUF3385: Domain of unknown function (DUF3385); InterPro: IPR024585 This uncharacterised domain is is typically between 160 to 172 amino acids in length	Back alignment and domain information

>KOG0168\|consensus	Back alignment and domain information

>KOG1993\|consensus	Back alignment and domain information

>KOG1967\|consensus	Back alignment and domain information

>KOG2933\|consensus	Back alignment and domain information

>KOG0392\|consensus	Back alignment and domain information

>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []	Back alignment and domain information

>KOG4413\|consensus	Back alignment and domain information

>KOG1993\|consensus	Back alignment and domain information

>PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter	Back alignment and domain information

>PF13251 DUF4042: Domain of unknown function (DUF4042)	Back alignment and domain information

>KOG2274\|consensus	Back alignment and domain information

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism	Back alignment and domain information

>COG5218 YCG1 Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning]	Back alignment and domain information

>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane	Back alignment and domain information

>PF12054 DUF3535: Domain of unknown function (DUF3535); InterPro: IPR022707 This presumed domain is functionally uncharacterised	Back alignment and domain information

>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function	Back alignment and domain information

>KOG0392\|consensus	Back alignment and domain information

>cd08050 TAF6 TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex	Back alignment and domain information

>KOG0891\|consensus	Back alignment and domain information

>KOG4524\|consensus	Back alignment and domain information

>KOG1822\|consensus	Back alignment and domain information

>PF12074 DUF3554: Domain of unknown function (DUF3554); InterPro: IPR022716 This presumed domain is functionally uncharacterised	Back alignment and domain information

>COG5098 Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]	Back alignment and domain information

>PF10521 DUF2454: Protein of unknown function (DUF2454); InterPro: IPR018870 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to Schizosaccharomyces pombe (Fission yeast) Tti2p; may interact with Rsm23p []	Back alignment and domain information

>KOG2011\|consensus	Back alignment and domain information

>KOG2759\|consensus	Back alignment and domain information

>KOG4535\|consensus	Back alignment and domain information

>KOG1992\|consensus	Back alignment and domain information

>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>KOG2549\|consensus	Back alignment and domain information

>KOG1517\|consensus	Back alignment and domain information

>KOG2274\|consensus	Back alignment and domain information

>PF04118 Dopey_N: Dopey, N-terminal; InterPro: IPR007249 DopA is the founding member of the Dopey family and is required for correct cell morphology and spatiotemporal organisation of multicellular structures in the filamentous fungus Emericella nidulans (Aspergillus nidulans)	Back alignment and domain information

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>KOG1822\|consensus	Back alignment and domain information

>KOG1525\|consensus	Back alignment and domain information

>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments	Back alignment and domain information

>PF12530 DUF3730: Protein of unknown function (DUF3730) ; InterPro: IPR022542 This domain is found in eukaryotes, and is typically between 220 and 262 amino acids in length	Back alignment and domain information

>KOG1517\|consensus	Back alignment and domain information

>KOG4500\|consensus	Back alignment and domain information

>KOG0414\|consensus	Back alignment and domain information

>PF10363 DUF2435: Protein of unknown function (DUF2435)	Back alignment and domain information

>PF08167 RIX1: rRNA processing/ribosome biogenesis	Back alignment and domain information

>cd08050 TAF6 TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex	Back alignment and domain information

>KOG1222\|consensus	Back alignment and domain information

>PF13001 Ecm29: Proteasome stabiliser; InterPro: IPR024372 The proteasome (or macropain) (3	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1359
2fho_A		47	Nmr Solution Structure Of The Human Spliceosomal Pr		1e-16
2fho_A		47	Nmr Solution Structure Of The Human Spliceosomal Pr		1e-13
2f9d_P		43	2.5 Angstrom Resolution Structure Of The Spliceosom		2e-13
2f9d_P		43	2.5 Angstrom Resolution Structure Of The Spliceosom		2e-13
2f9d_P		43	2.5 Angstrom Resolution Structure Of The Spliceosom		2e-13
3lqv_P		39	Branch Recognition By Sf3b14 Length = 39		4e-13
3lqv_P		39	Branch Recognition By Sf3b14 Length = 39		4e-13
3lqv_P		39	Branch Recognition By Sf3b14 Length = 39		4e-13
2f9j_P		36	3.0 Angstrom Resolution Structure Of A Y22m Mutant		7e-11
2f9j_P		36	3.0 Angstrom Resolution Structure Of A Y22m Mutant		7e-11
2f9j_P		36	3.0 Angstrom Resolution Structure Of A Y22m Mutant		7e-11

>pdb|2FHO|A Chain A, Nmr Solution Structure Of The Human Spliceosomal Protein Complex P14-Sf3b155 Length = 47