Psyllid ID: psy10895


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRGGPKHTASAKESHGKSKSQQQHQSSGSKN
cHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEcEEEcccccEEEEEEEccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHEEEEcccccccccccccccccHHHHHHHHcccccEEEccccccccccccccccEEEEEEEcccccccEEEccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHcccHHHHHHHHccccccccccccEEEEEEEEEEcccccccccccEEEEEccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHcHHHccccccccHHHHHHccccccHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEccccccHHccccHHccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEccccccEcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccHcccccHHHHHHHccccccEEEEccccccccccccccEEEEEEEcccccccEEEEEEEccccccccccccEccccccHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHccccccccccccEEEEEEEEEEEcccccccccEEEEEEccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
YTRNLFLRSICLVYVFAFASLYiqipglfgdngilparsqlegdeslplskklhrkptllwlapfiglsTEYMMDVISLVGIFLAFTGfvsqkfcckpnfFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCiivspfginkdssrkgsspsdqVKFWLVRWLLFRLIVtspinklssgdpswWTLKALGIhfqsmglptplawyshhlpaWFLRLTTAFSLATelllpplfllplkgAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLlddsyfypdlnrkkNKLLSILSSMVSLVMFGATVFAFYKLFGIkvdqknftvqsqitfsksqyddYLGQGLILALYLGLASFIVTATTAlwdtmrtpsklgklnslVVTSFYIVTSLLIFSintvplanlhpavnktlhpmVKSWHGQLAHLHISNPYALFRvmtgvdgrpevIIEGaqnrqgpwteipfrykpgnvnrtlpfvaphqprlDWQMWFAALGtyhqnpwisSLAYRILTHqpevlslldsthypfkakaPAFLRAVSYKyvytpantkATQWWIRKREeeyfpefeanhQPLIAYLTQFgilkkrkpehiepqVKDALDSIRKYTATADPAILLWSFFITGLAIIYLrggpkhtasakeshgksksqqqhqssgskn
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPlskklhrkptlLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFginkdssrkgsspsdqVKFWLVRWLLFRLIVTspinklssgdPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDtmrtpsklgklnsLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIegaqnrqgpwteIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRGGPKHTASakeshgksksqqqhqssgskn
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATElllpplfllplKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKllsilssmvslvmFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRGGPKHTASAKEshgksksqqqhqssgskN
***NLFLRSICLVYVFAFASLYIQIPGLFGDNGILPA***************LHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGI**************VKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRG****************************
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLT***************QVKDALDSIRKYTATADPAILLWSFFITGLAIIY*******************************
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGINK**********DQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRGGP**************************
YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRGGPK*************************
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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iiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
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YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKRKPEHIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRGGPKHTASAKESHGKSKSQQQHQSSGSKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query661 2.2.26 [Sep-21-2011]
A1L504703 Lipase maturation factor yes N/A 0.978 0.920 0.378 1e-120
Q8C3X8702 Lipase maturation factor yes N/A 0.986 0.928 0.377 1e-116
Q9BU23707 Lipase maturation factor yes N/A 0.947 0.885 0.386 1e-116
A1L1J9702 Lipase maturation factor yes N/A 0.983 0.925 0.381 1e-114
Q5ZKZ9714 Lipase maturation factor yes N/A 0.963 0.892 0.358 1e-112
Q0P4Y8707 Lipase maturation factor yes N/A 0.989 0.925 0.368 1e-111
Q7ZWN0707 Lipase maturation factor N/A N/A 0.984 0.920 0.356 1e-111
Q3U3R4574 Lipase maturation factor no N/A 0.408 0.470 0.328 2e-32
Q96S06567 Lipase maturation factor no N/A 0.406 0.474 0.320 1e-29
Q0P5C0561 Lipase maturation factor no N/A 0.432 0.509 0.310 5e-28
>sp|A1L504|LMF2_BOVIN Lipase maturation factor 2 OS=Bos taurus GN=LMF2 PE=2 SV=2 Back     alignment and function desciption
 Score =  433 bits (1113), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/671 (37%), Positives = 378/671 (56%), Gaps = 24/671 (3%)

Query: 3   RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
           R LFL+ +  V++FAFASLY QIPGL+G  GILPAR  L   +     ++L   PTLLW 
Sbjct: 8   RQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLR-PQGKGRWQQLWETPTLLWE 66

Query: 63  APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
           AP +GL T   ++++SL+G  LA    ++++      +  LW+ Y S+ QVGQ F+ FQW
Sbjct: 67  APLLGLDTAQGLELLSLLGTVLALGALLTRQLHHPLVYLLLWAAYLSVCQVGQVFLYFQW 126

Query: 123 DTLLLETGFLCIIVSPFGINKDSSRK------GSSPSDQVKFWLVRWLLFRLIVTSPINK 176
           D+LLLETGFL ++V+P G+  +  +       G SP + + FWLVRWLLFRL+  S + K
Sbjct: 127 DSLLLETGFLAMLVAPLGLPPNHKQAPQGRPGGVSPHEGLPFWLVRWLLFRLMFASGVVK 186

Query: 177 LSSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLP 236
           L+S  P+WW L AL  H+++  LPTP AW++HHLP W  +L+   +   E+ +PPLF  P
Sbjct: 187 LTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAP 246

Query: 237 LKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKNKLL--- 293
           ++  +  AFY Q+ LQ+ II TGN+N++NLLT+ L  +LLDD++     +  + K +   
Sbjct: 247 VRRLRLAAFYSQVLLQVLIILTGNYNFFNLLTLVLTTALLDDTHLAAKSSTSRRKRMPSS 306

Query: 294 ------SILSSMVSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLI 347
                 ++L+ ++ L ++G         FG++VD +   V+S+  F+  Q   +L    +
Sbjct: 307 WPKALLAMLTLLLELAVYGLLACGVVHYFGLEVDWEQHVVRSRTMFTFHQLSQWLKTVTL 366

Query: 348 LALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHP 407
             ++LG AS      TALW  ++    L KL + V  S +   ++ +F I+ VP + + P
Sbjct: 367 PTMWLGAASLAWELLTALWRWVQVRGSLRKLCAAVQLSVFGTATVALFLISLVPYSYMEP 426

Query: 408 AVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRY 467
           + +  L          + HL ++N Y LFR MTG+ GRPEV++EG+ +    WTEI F Y
Sbjct: 427 SSHGRLWTGAHRLFSTVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHQ-WTEIEFMY 485

Query: 468 KPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDS--T 525
           KPGN++R  P V PHQPRLDWQMWFAALG +  +PW +SL  R+L  +  V+ L+ +   
Sbjct: 486 KPGNLSRPPPIVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQNHVP 545

Query: 526 HYPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGI 585
            YPF  + P ++RA  YKY ++    +  QWW R+  EE+FP        L   L QFG+
Sbjct: 546 SYPFHQQPPTYVRAQLYKYWFSHPWEQG-QWWRRQWVEEFFPSVSLGDPALDMLLRQFGL 604

Query: 586 LKKRKPE--HIEPQVKDALDSIRKYTATADPAILLWSFFITGLAIIYLRG--GPKHTASA 641
             K  P        +  AL  +RK  +  +   LLW       AI  ++   GP+     
Sbjct: 605 QDKSPPRAGGSSNTLSQALHWVRKQLSPLEAPALLWGLLGAVGAIKVMQALLGPQSLPRT 664

Query: 642 KESHGKSKSQQ 652
           KE   K   Q+
Sbjct: 665 KEEKHKPAPQE 675




Involved in the maturation of specific proteins in the endoplasmic reticulum. May be required for maturation and transport of active lipoprotein lipase (LPL) through the secretory pathway.
Bos taurus (taxid: 9913)
>sp|Q8C3X8|LMF2_MOUSE Lipase maturation factor 2 OS=Mus musculus GN=Lmf2 PE=2 SV=1 Back     alignment and function description
>sp|Q9BU23|LMF2_HUMAN Lipase maturation factor 2 OS=Homo sapiens GN=LMF2 PE=1 SV=2 Back     alignment and function description
>sp|A1L1J9|LMF2_RAT Lipase maturation factor 2 OS=Rattus norvegicus GN=Lmf2 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZKZ9|LMF2_CHICK Lipase maturation factor 2 OS=Gallus gallus GN=LMF2 PE=2 SV=2 Back     alignment and function description
>sp|Q0P4Y8|LMF2_XENTR Lipase maturation factor 2 OS=Xenopus tropicalis GN=lmf2 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZWN0|LMF2_XENLA Lipase maturation factor 2 OS=Xenopus laevis GN=lmf2 PE=2 SV=1 Back     alignment and function description
>sp|Q3U3R4|LMF1_MOUSE Lipase maturation factor 1 OS=Mus musculus GN=Lmf1 PE=1 SV=1 Back     alignment and function description
>sp|Q96S06|LMF1_HUMAN Lipase maturation factor 1 OS=Homo sapiens GN=LMF1 PE=1 SV=1 Back     alignment and function description
>sp|Q0P5C0|LMF1_BOVIN Lipase maturation factor 1 OS=Bos taurus GN=LMF1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query661
156551350640 PREDICTED: lipase maturation factor 2-li 0.947 0.978 0.511 0.0
383850488648 PREDICTED: lipase maturation factor 2-li 0.939 0.958 0.508 0.0
340712474648 PREDICTED: LOW QUALITY PROTEIN: lipase m 0.944 0.962 0.514 0.0
350399597648 PREDICTED: lipase maturation factor 2-li 0.944 0.962 0.504 0.0
332028239651 Lipase maturation factor 2 [Acromyrmex e 0.936 0.950 0.495 1e-180
322778844639 hypothetical protein SINV_09933 [Solenop 0.939 0.971 0.486 1e-180
307211951646 Lipase maturation factor 2 [Harpegnathos 0.937 0.959 0.501 1e-180
328790105648 PREDICTED: lipase maturation factor 2-li 0.945 0.964 0.508 1e-178
380011719648 PREDICTED: lipase maturation factor 2-li 0.945 0.964 0.505 1e-178
242024569602 conserved hypothetical protein [Pediculu 0.898 0.986 0.497 1e-171
>gi|156551350|ref|XP_001602516.1| PREDICTED: lipase maturation factor 2-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/635 (51%), Positives = 446/635 (70%), Gaps = 9/635 (1%)

Query: 1   YTRNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLL 60
           YTRNLFLR IC++Y+FAF S Y+QIPGL+GDNG+LPA++QL+     PL +KL ++PTLL
Sbjct: 6   YTRNLFLRGICIIYLFAFLSFYVQIPGLYGDNGVLPAKTQLDLQSRKPLLQKLKQQPTLL 65

Query: 61  WLAPFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSF 120
           W AP++GL+ EYM+D+++LVG  L+F GFVSQKFC  P F  LW+LYYS++Q+GQTFM F
Sbjct: 66  WFAPYLGLNVEYMLDIVALVGTVLSFLGFVSQKFCSAPVFATLWALYYSIYQIGQTFMWF 125

Query: 121 QWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSG 180
           QWD LLLE GFLCIIV+PF  +  + +  S+PSD + FW VRWLLFRL+ +S + KL+SG
Sbjct: 126 QWDILLLEAGFLCIIVAPFWYSNHTRK--STPSDSLTFWTVRWLLFRLMFSSGVVKLTSG 183

Query: 181 DPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGA 240
            P WW L AL +HF+S  +PTPLAWY+HHLP W+LRL T  +   EL++P LF  P++  
Sbjct: 184 CPLWWNLDALNVHFESQCIPTPLAWYAHHLPRWYLRLNTVGANIFELVIPFLFFFPIRKV 243

Query: 241 KKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFYPDLNRKKN-KLLSILSSM 299
           + +AFY Q+FLQ+ IIATGN+N++NLLTI LC+SLLDD +FY   +R +N K+  +LS++
Sbjct: 244 RIVAFYLQVFLQVHIIATGNYNFFNLLTICLCISLLDDHFFYTKKSRTENSKIFGVLSTI 303

Query: 300 VSLVMFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLILALYLGLASFIV 359
             + ++   ++  Y  + ++  + N+T+ S+I F++  +D  L + +  ++Y+G+AS  +
Sbjct: 304 ACIAVYAGILYGTYVYYNLRFTE-NWTITSKIGFTEKDFDYALSRAVPYSIYIGMASLGL 362

Query: 360 TATTALWDT-MRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLA-NLHPAVNKTLHPMV 417
           T   A+ ++ +       KL + +VT  Y      +F+++TVP A +L+P +N TL P +
Sbjct: 363 TVANAVTNSIINVKGTQKKLVTTLVTLLYTGIVASLFALSTVPYAVSLYPKLNSTLPPQL 422

Query: 418 KSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLP 477
           K  H ++ HLH+ N Y LFR MTG DGRPEV+IEG+ + +GPW E  F YKPGNVN +LP
Sbjct: 423 KQLHAKVDHLHLVNSYGLFRRMTGADGRPEVVIEGSNSIEGPWKEYHFLYKPGNVNNSLP 482

Query: 478 FVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDSTHYPFKAKAPAFL 537
           FVAPHQPRLDWQMWFA+LGTYHQNPW+ SLAYRIL  QPEVL+LL++   PFK   P +L
Sbjct: 483 FVAPHQPRLDWQMWFASLGTYHQNPWLMSLAYRILHGQPEVLALLNNAENPFKNNPPKYL 542

Query: 538 RAVSYKYVYTPANT--KATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKK-RKPEHI 594
           RA  Y Y YTP+N   K   WWIR+R++EYFP F  +H PLI YL++  I++    PE  
Sbjct: 543 RASLYHYRYTPSNADRKVQSWWIRERKDEYFPIFSRDHPPLIEYLSKMKIIQDIPAPEVT 602

Query: 595 EPQVKDALDSIRKYTATADPAILLWSFFITGLAII 629
               K  LD IR Y    +  +L W  F+ G AII
Sbjct: 603 NSTFKTILDFIRSYFTKLEATLLSWMVFMAGCAII 637




Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850488|ref|XP_003700827.1| PREDICTED: lipase maturation factor 2-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|340712474|ref|XP_003394784.1| PREDICTED: LOW QUALITY PROTEIN: lipase maturation factor 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350399597|ref|XP_003485584.1| PREDICTED: lipase maturation factor 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332028239|gb|EGI68287.1| Lipase maturation factor 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322778844|gb|EFZ09260.1| hypothetical protein SINV_09933 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307211951|gb|EFN87863.1| Lipase maturation factor 2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328790105|ref|XP_001120633.2| PREDICTED: lipase maturation factor 2-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|380011719|ref|XP_003689945.1| PREDICTED: lipase maturation factor 2-like isoform 1 [Apis florea] Back     alignment and taxonomy information
>gi|242024569|ref|XP_002432700.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518170|gb|EEB19962.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query661
MGI|MGI:2146015702 Lmf2 "lipase maturation factor 0.965 0.908 0.375 1.2e-115
UNIPROTKB|Q9BU23707 LMF2 "Lipase maturation factor 0.948 0.886 0.369 1.9e-113
UNIPROTKB|A1L504703 LMF2 "Lipase maturation factor 0.965 0.907 0.370 3.2e-113
RGD|1306274702 Lmf2 "lipase maturation factor 0.962 0.905 0.372 8.4e-113
ZFIN|ZDB-GENE-080723-47737 lmf2a "lipase maturation facto 0.942 0.845 0.363 7.6e-112
UNIPROTKB|Q5ZKZ9714 LMF2 "Lipase maturation factor 0.947 0.876 0.363 1.2e-106
ZFIN|ZDB-GENE-070206-11713 lmf2b "lipase maturation facto 0.942 0.873 0.34 6.1e-94
WB|WBGene00019657624 K11G12.6 [Caenorhabditis elega 0.366 0.387 0.356 8.4e-70
MGI|MGI:1923733574 Lmf1 "lipase maturation factor 0.408 0.470 0.318 8.3e-53
UNIPROTKB|Q96S06567 LMF1 "Lipase maturation factor 0.408 0.476 0.310 2.1e-52
MGI|MGI:2146015 Lmf2 "lipase maturation factor 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
 Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
 Identities = 248/661 (37%), Positives = 359/661 (54%)

Query:     3 RNLFLRSICLVYVFAFASLYIQIPGLFGDNGILPARSQLEGDESLPLSKKLHRKPTLLWL 62
             + LFL+ +  VY+FAFASLY QIPGL+G  GILPAR  L   +   L ++L   PTLLW 
Sbjct:     8 QQLFLQGVAAVYLFAFASLYTQIPGLYGPEGILPARRTLR-PQGKGLWQQLWETPTLLWE 66

Query:    63 APFIGLSTEYMMDVISLVGIFLAFTGFVSQKFCCKPNFFALWSLYYSLFQVGQTFMSFQW 122
             AP +GL T   +D+++L+G  LA    +         +  LW  Y S +QVGQ F+ FQW
Sbjct:    67 APRLGLDTAQGLDLLTLLGTVLALGALLLNSLRHPFVYLLLWVAYRSAYQVGQVFLYFQW 126

Query:   123 DTLLLETGFLCIIVSPF-GINKDSSRKG----SSPSDQVKFWLVRWLLFRLIVTSPINKL 177
             D+LLLETGFL I+V+P  G +K    +G    + P + + FWLVRWLLFRL+  S + KL
Sbjct:   127 DSLLLETGFLAILVAPLRGPSKHKILQGRLAGALPHEDLPFWLVRWLLFRLMFASGVVKL 186

Query:   178 SSGDPSWWTLKALGIHFQSMGLPTPLAWYSHHLPAWFLRLTTAFSLATEXXXXXXXXXXX 237
             +S  P+WW L AL  H+++  LPTP AW++HHLP W  +L+   +   E           
Sbjct:   187 TSRCPTWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPI 246

Query:   238 KGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLDDSYFY--PDLN-RKKNKXX- 293
             +  +  AFY Q  LQ+ II TGN+N++NLLT+ L  +LLDD +    P L   KK     
Sbjct:   247 RRLRLTAFYAQALLQVLIIITGNYNFFNLLTLVLTTALLDDRHLSAEPGLRCHKKMPTSW 306

Query:   294 -----XXXXXXXXXXXFGATVFAFYKLFGIKVDQKNFTVQSQITFSKSQYDDYLGQGLIL 348
                             +G   +     FG++VD +   + S+ TF+  Q+  +L    + 
Sbjct:   307 PKALLTALSLLLELTVYGLLAYGTVYYFGLEVDWQQHIILSKTTFTFHQFSQWLKTVTLP 366

Query:   349 ALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPA 408
              ++LG AS        LW  ++      K ++ +  S     ++ +F I+ VP + + P 
Sbjct:   367 TVWLGTASLAWELLVVLWRWIQVQGWSRKFSAGIQLSVLGTATVALFLISLVPYSYVEPG 426

Query:   409 VNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYK 468
              +  L        G + HL ++N Y LFR MTGV GRPEV++EG+ + Q  WTEI F YK
Sbjct:   427 THGRLWTGAHRLFGSVEHLQLANSYGLFRRMTGVGGRPEVVLEGSYDGQH-WTEIEFMYK 485

Query:   469 PGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLLDS--TH 526
             PGNV+R  PF+ PHQPRLDWQMWFAALG +  +PW + L  R+L  +  V+ L+ S   +
Sbjct:   486 PGNVSRPPPFLTPHQPRLDWQMWFAALGPHTHSPWFTGLVLRLLQGKEPVIRLVQSHVAN 545

Query:   527 YPFKAKAPAFLRAVSYKYVYTPANTKATQWWIRKREEEYFPEFEANHQPLIAYLTQFGIL 586
             YPF  + P +LRA  YKY ++    ++ +WW R+  EE+FP        L   L QFG+ 
Sbjct:   546 YPFHERPPTYLRAQRYKYWFSKPGDQS-RWWHRQWVEEFFPSVSLGDPTLETLLQQFGLK 604

Query:   587 KKRKPEHIEPQ--VKDALDSIRKYTATADPAILLWSFF--ITGLAIIYLRGGPKHTASAK 642
              K  P    P   +   L+ +R   +  +P ILLW  F  +  + ++     P+   S+K
Sbjct:   605 DKSPPRARSPSNGLAQTLNWVRTQLSPLEPPILLWGLFGAVVAIRVVQTLLAPRPLQSSK 664

Query:   643 E 643
             +
Sbjct:   665 Q 665




GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0005783 "endoplasmic reticulum" evidence=IEA
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|Q9BU23 LMF2 "Lipase maturation factor 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A1L504 LMF2 "Lipase maturation factor 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1306274 Lmf2 "lipase maturation factor 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080723-47 lmf2a "lipase maturation factor 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZKZ9 LMF2 "Lipase maturation factor 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070206-11 lmf2b "lipase maturation factor 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00019657 K11G12.6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:1923733 Lmf1 "lipase maturation factor 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q96S06 LMF1 "Lipase maturation factor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9BU23LMF2_HUMANNo assigned EC number0.38650.94700.8854yesN/A
Q8C3X8LMF2_MOUSENo assigned EC number0.37770.98630.9287yesN/A
A1L504LMF2_BOVINNo assigned EC number0.37850.97880.9203yesN/A
Q0P4Y8LMF2_XENTRNo assigned EC number0.36870.98940.9250yesN/A
Q5ZKZ9LMF2_CHICKNo assigned EC number0.35890.96360.8921yesN/A
A1L1J9LMF2_RATNo assigned EC number0.38100.98330.9259yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query661
pfam06762371 pfam06762, LMF1, Lipase maturation factor 4e-53
pfam06762371 pfam06762, LMF1, Lipase maturation factor 1e-51
>gnl|CDD|219165 pfam06762, LMF1, Lipase maturation factor Back     alignment and domain information
 Score =  186 bits (474), Expect = 4e-53
 Identities = 83/230 (36%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 348 LALYLGLASFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTS---LLIFSINTVPLAN 404
           L + L L+    +    L+ + R P       S      Y+V     LLI +++   + N
Sbjct: 145 LTIVLALSLLDDSFLAFLFPSKREPDSRRLPASPPPLWKYLVVLLVALLILALSLWVVLN 204

Query: 405 LHPAVNKTLHPMVKSWHGQLAHLHISNPYALFRVMTGVDGRPEVIIEG--AQNRQGPWTE 462
           L  +  +     +   +      H+ N Y  F  MT   GRPEVIIEG         W E
Sbjct: 205 LLSSRQRNNLAFM---NSSFNPFHLVNTYGAFGSMTK--GRPEVIIEGTHDGEIDTVWRE 259

Query: 463 IPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILTHQPEVLSLL 522
             F+YKPG+V+R    +AP+ PRLDWQMWFAALGTY Q PW  S   ++L + P+VLSLL
Sbjct: 260 YEFKYKPGDVSRIPRQIAPYHPRLDWQMWFAALGTYEQPPWFLSFLKKLLQNDPDVLSLL 319

Query: 523 DSTHYPFKAKAPAFLRAVSYKYVYTPANTKAT---QWWIRKREEEYFPEF 569
              H PF    P F+RA  Y+Y +T    +     QWW R    EY P  
Sbjct: 320 A--HNPFPDDPPRFVRARLYRYRFTTFAKERRETGQWWRRTLVGEYVPPV 367


This family of transmembrane proteins includes the lipase maturation factor, LMF1. Lipoprotein lipase and hepatic lipase require LMF1 to fold into their active states. The precise role of LMF1 in lipase folding has yet to be determined. Length = 371

>gnl|CDD|219165 pfam06762, LMF1, Lipase maturation factor Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 661
PF06762384 LMF1: Lipase maturation factor; InterPro: IPR00961 100.0
smart00752271 HTTM Horizontally Transferred TransMembrane Domain 99.35
PF05090446 VKG_Carbox: Vitamin K-dependent gamma-carboxylase; 98.91
>PF06762 LMF1: Lipase maturation factor; InterPro: IPR009613 This family, which includes bacterial and eukaryotic members, represents a conserved region located towards the C-terminal end of a number of hypothetical proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=9.5e-129  Score=1045.44  Aligned_cols=377  Identities=49%  Similarity=0.958  Sum_probs=313.4

Q ss_pred             cchhhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHhcCCccccccCCCcccccccchhhhhcc
Q psy10895        118 MSFQWDTLLLETGFLCIIVSPFGINKDSSRKGSSPSDQVKFWLVRWLLFRLIVTSPINKLSSGDPSWWTLKALGIHFQSM  197 (661)
Q Consensus       118 ~~FqWD~LLLE~GFLaiflaP~~~~~~~~~~~~~p~~~l~~wl~RwLlFRlmf~SGvvKl~s~cp~W~~LTAL~yHyETQ  197 (661)
                      |+||||+||||+||||||+||++.   ++..+..|+|.+++|++|||+||+|||||+||+ |+||+|||||||+||||||
T Consensus         1 ~~fqWD~lLLE~GFL~iflaP~~~---~~~~~~~~~~~~~~wl~rwLlFRlmf~SGlvKl-s~dp~W~~LTAL~yHyETQ   76 (384)
T PF06762_consen    1 YSFQWDSLLLETGFLAIFLAPFCF---SRLPGRTPPPSLILWLLRWLLFRLMFGSGLVKL-SGDPTWWDLTALDYHYETQ   76 (384)
T ss_pred             CcchHHHHHHHHHHHHHHHhhhhc---cCCCCCCCCcHHHHHHHHHHHHHHHhcccceEe-cCCCccccccchhhHhhhC
Confidence            689999999999999999999972   356778899999999999999999999999999 9999999999999999999


Q ss_pred             CCCCchhhhhccCchhHHHHHHHHHHHHHhhccceeecccchhhHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhhcc
Q psy10895        198 GLPTPLAWYSHHLPAWFLRLTTAFSLATELLLPPLFLLPLKGAKKIAFYFQLFLQLTIIATGNFNWYNLLTIALCLSLLD  277 (661)
Q Consensus       198 plPtplSWyaH~lP~~~~kl~v~~~~~iEi~~P~l~f~P~R~~R~~a~~~qvllQi~IilTGNy~FfN~LtivL~lsllD  277 (661)
                      |||||+||||||+|+|+||++|++||+|||++|||+|+|+|++|++||++||++|++||+||||||||+|||+||++|+|
T Consensus        77 PlPtplswy~H~lP~~~~kl~~~~~~~iEl~~p~l~f~P~r~~R~~~~~~~i~~q~~ii~tGNy~ffN~Ltivl~l~~lD  156 (384)
T PF06762_consen   77 PLPTPLSWYAHQLPKWFHKLSVAANHFIELVLPFLFFAPFRRLRLFAFYIQILLQLLIILTGNYNFFNLLTIVLCLSLLD  156 (384)
T ss_pred             CCCCHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccch-hhhhHHHHHHHHHHHHHHhhhheeeeeeeceeecC-CCceeccccccchhhhhHHhhhhhhHHHHHHHH
Q psy10895        278 DSYFYPDLNR-KKNKLLSILSSMVSLVMFGATVFAFYKLFGIKVDQ-KNFTVQSQITFSKSQYDDYLGQGLILALYLGLA  355 (661)
Q Consensus       278 D~~l~~~~~~-~~~~~~~~~~~l~~~~v~~~~~~~~~~~f~~~~~~-~~~~~~s~~~ft~~~f~~~l~~~~~~~i~~~~~  355 (661)
                      |+++....++ ..++.                         ...+. ++.....  .++.......++         .++
T Consensus       157 D~~l~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~  200 (384)
T PF06762_consen  157 DSFLNRFFPKFINSRL-------------------------IISDELQRKPALR--QFTKSSFSPLWK---------TLI  200 (384)
T ss_pred             hHHHhhhccccccchh-------------------------hhhhhcccccccc--cccccccchHHH---------HHH
Confidence            9999875333 11110                         00000 0000000  011111111111         111


Q ss_pred             HHHHHHHHHhhhhccCCccccchhhhHHHHHHHHHHHHhhhhccccccccccccccccchhhhhhhccCccceeeeccCC
Q psy10895        356 SFIVTATTALWDTMRTPSKLGKLNSLVVTSFYIVTSLLIFSINTVPLANLHPAVNKTLHPMVKSWHGQLAHLHISNPYAL  435 (661)
Q Consensus       356 sl~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lF~islvp~~~l~~~~~~~l~~~~~~~~~~~~~l~lvNsYGl  435 (661)
                      ..+..+                               .++..|+.|...+-...  ..++..++||+++++||+||+||+
T Consensus       201 ~~~~~~-------------------------------~v~~~s~~~~~~l~s~~--~~~~~~~~m~~~~~~~~lvNsYGl  247 (384)
T PF06762_consen  201 VVFVAI-------------------------------LVLALSVPPVRNLFSPR--QIWNSLTKMNASFNPFHLVNSYGL  247 (384)
T ss_pred             HHHHHH-------------------------------HHHHHHHHHHHHHhcch--hhhhhhHHHhhccccceEEecccc
Confidence            111111                               11222222222111111  112245569999999999999999


Q ss_pred             cccccCCCCcceEEEEeecCC--CCCceeecCccCCCCCCCCCCccCCCCcchhHHHHHhhcCCCCCCccHHHHHHHHHc
Q psy10895        436 FRVMTGVDGRPEVIIEGAQNR--QGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQMWFAALGTYHQNPWISSLAYRILT  513 (661)
Q Consensus       436 F~~mTgv~~RpEvIiEGs~d~--~~~W~EyeF~yKPG~v~r~P~~vaPhqPRLDWqMWFAAl~~~~~~pWf~slv~rLL~  513 (661)
                      ||+||  ++|||||||||+|.  +++|+||||+||||||+|+||+|+||||||||||||||+|++++||||.||++||||
T Consensus       248 F~~mt--~~R~EIIiEGs~d~~~~~~W~EYeF~~KPg~v~r~P~~vaPy~pRLDWqmWFaAl~~~~~~pWf~~ll~rLL~  325 (384)
T PF06762_consen  248 FGSMT--KGRPEIIIEGSNDGDPTGPWREYEFKYKPGDVNRRPPFVAPYQPRLDWQMWFAALGTYQQNPWFLSLLYRLLQ  325 (384)
T ss_pred             ccccC--CCceEEEEEeccCCCCCCceEEeecccCCCCcccCCCcCCcCCchhhHHHHhhccCCCCCCchHHHHHHHHHc
Confidence            99999  69999999999994  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhHhhhhhcCCCCC-CCCCCceeeeeceeeeecCCCCCCC--CCeeeeeceeeccccccCC
Q psy10895        514 HQPEVLSLLDSTHYPF-KAKAPAFLRAVSYKYVYTPANTKAT--QWWIRKREEEYFPEFEANH  573 (661)
Q Consensus       514 ~~~~Vl~Ll~~~~~PF-~~~PP~yIRa~lY~Y~FT~~~~~~~--~WW~R~~~~ey~p~~~~~~  573 (661)
                      |||||++||+  +||| +++|||||||++|+||||+++|+++  +||+|++  ||+||++++|
T Consensus       326 n~~~Vl~LL~--~nPF~~~~pP~~iRa~lY~Y~Ft~~~~~~~~g~WW~R~~--ey~P~~sl~~  384 (384)
T PF06762_consen  326 NDPEVLSLLD--HNPFQPDKPPKYIRASLYRYRFTKPGERRRSGNWWTRER--EYFPPVSLEN  384 (384)
T ss_pred             CCHHHHHHhc--cCCCCCCCCCcEEEeEEEEEecCCccccccCCCCeeeee--cccCCccCCC
Confidence            9999999999  9999 7999999999999999999977654  8999999  9999999986



These are possibly integral membrane proteins.

>smart00752 HTTM Horizontally Transferred TransMembrane Domain Back     alignment and domain information
>PF05090 VKG_Carbox: Vitamin K-dependent gamma-carboxylase; InterPro: IPR007782 Using reduced vitamin K, oxygen, and carbon dioxide, gamma-glutamyl carboxylase post-translationally modifies certain glutamates by adding carbon dioxide to the gamma position of those amino acids Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query661
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 59.5 bits (143), Expect = 3e-09
 Identities = 60/401 (14%), Positives = 118/401 (29%), Gaps = 97/401 (24%)

Query: 275 LLDDSYFYPDLNRK--KNKLLSILSSMV--SLVMFGATVFAFYKLFGIKVDQKNFTVQSQ 330
             D   F  + + K  ++   SILS      ++M    V    +LF   + ++   VQ  
Sbjct: 25  FEDA--FVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK- 81

Query: 331 ITFSKSQYD-DYLGQGLILALYLGLASFIVTATTALWDTMRTPSKLGKL---------NS 380
             F +     +Y               F+++    +    R PS + ++         N 
Sbjct: 82  --FVEEVLRINY--------------KFLMSP---IKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 381 LVVTSFYIVTSL-LIFSINTVPLANLHPAVNKTLHPMV---KSWHGQLA-------HLHI 429
             V + Y V+ L     +    L  L PA N  +  ++   K+W   +A        +  
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQA-LLELRPAKNVLIDGVLGSGKTW---VALDVCLSYKVQC 178

Query: 430 SNPYALFRVMTGVDGRPEVIIEGAQNRQGPWTEIPFRYKPGNVNRTLPFVAPHQPRLDWQ 489
              + +F +       PE ++E  Q        + ++  P   +R+             Q
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQK-------LLYQIDPNWTSRSDHSSNIKLRIHSIQ 231

Query: 490 MWFAALGTYHQNP---------WISSL--AY----RIL--THQPEVLSLLDSTHYPFKAK 532
                L                  +    A+    +IL  T   +V   L +        
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT----- 286

Query: 533 APAFLRAVSYKYVYTPANTK---ATQWWIRKREEEYFPEFEANHQPLIAYLTQFGILKKR 589
               +    +    TP   K       ++  R ++  P       P    L+      + 
Sbjct: 287 --THISLDHHSMTLTPDEVKSLLLK--YLDCRPQD-LPREVLTTNPRR--LSIIAESIRD 339

Query: 590 KPEHIE--PQVK-DALDSIRKYTATA-DPAI---LLWSFFI 623
                +    V  D L +I + +    +PA    +     +
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00