Psyllid ID: psy11611


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60
MSFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCREDAGGQQHGGITSQG
ccHHHHHHcccccHHHHHHHHccccccEEEHHHHHHHHHHHHHHcccccccccccccccc
ccHHHHHHcccccHHHHHHHHccccccEEEHHHHHHHHHHcHccHHcccccccccccccc
MSFLREelkyddgaekrqkafhknddmHVSVKELWDVWIkseccredaggqqhggitsqg
msflreelkyddgaekrqkafhknddmhvSVKELWDVWIKSECCRedaggqqhggitsqg
MSFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCREDAGGQQHGGITSQG
**************************MHVSVKELWDVWIKSECCR***************
**FLR*****************KNDDMHVSVKELWDVWIKSECC****************
MSFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCRE**************
*SFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCRED*************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCREDAGGQQHGGITSQG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query60 2.2.26 [Sep-21-2011]
P83094 570 Stromal interaction molec yes N/A 0.683 0.071 0.780 1e-13
>sp|P83094|STIM_DROME Stromal interaction molecule homolog OS=Drosophila melanogaster GN=Stim PE=1 SV=1 Back     alignment and function desciption
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 36/41 (87%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLREELKYD G EKRQKAFH NDDMH+SVKELW+ W++SE 
Sbjct: 170 FLREELKYDSGYEKRQKAFHFNDDMHISVKELWEAWLRSEV 210




Plays a role in mediating Ca(2+) influx following depletion of intracellular Ca(2+) stores.
Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query60
195041287 575 GH12177 [Drosophila grimshawi] gi|193900 0.683 0.071 0.804 1e-12
195135750 571 GI14178 [Drosophila mojavensis] gi|19391 0.683 0.071 0.804 2e-12
195400368 575 GJ18461 [Drosophila virilis] gi|19415585 0.683 0.071 0.804 2e-12
328720373 657 PREDICTED: stromal interaction molecule 0.683 0.062 0.780 2e-12
270005983 646 hypothetical protein TcasGA2_TC008118 [T 0.683 0.063 0.756 3e-12
195479064 569 GE16005 [Drosophila yakuba] gi|194188275 0.683 0.072 0.780 5e-12
194894082 569 GG19358 [Drosophila erecta] gi|190649653 0.683 0.072 0.780 5e-12
91081005 493 PREDICTED: similar to Stromal interactio 0.683 0.083 0.756 5e-12
24642358 570 stromal interaction molecule, isoform A 0.683 0.071 0.780 5e-12
195355489 577 GM22508 [Drosophila sechellia] gi|194129 0.683 0.071 0.780 5e-12
>gi|195041287|ref|XP_001991224.1| GH12177 [Drosophila grimshawi] gi|193900982|gb|EDV99848.1| GH12177 [Drosophila grimshawi] Back     alignment and taxonomy information
 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/41 (80%), Positives = 36/41 (87%)

Query: 3   FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSEC 43
           FLREELKYD G EKRQKAFH NDDMH+SVKELWD W++SE 
Sbjct: 175 FLREELKYDSGYEKRQKAFHFNDDMHISVKELWDAWLRSEV 215




Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195135750|ref|XP_002012295.1| GI14178 [Drosophila mojavensis] gi|193918159|gb|EDW17026.1| GI14178 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195400368|ref|XP_002058789.1| GJ18461 [Drosophila virilis] gi|194155859|gb|EDW71043.1| GJ18461 [Drosophila virilis] Back     alignment and taxonomy information
>gi|328720373|ref|XP_001951196.2| PREDICTED: stromal interaction molecule homolog [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|270005983|gb|EFA02431.1| hypothetical protein TcasGA2_TC008118 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195479064|ref|XP_002100751.1| GE16005 [Drosophila yakuba] gi|194188275|gb|EDX01859.1| GE16005 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|194894082|ref|XP_001978004.1| GG19358 [Drosophila erecta] gi|190649653|gb|EDV46931.1| GG19358 [Drosophila erecta] Back     alignment and taxonomy information
>gi|91081005|ref|XP_975159.1| PREDICTED: similar to Stromal interaction molecule homolog [Tribolium castaneum] Back     alignment and taxonomy information
>gi|24642358|ref|NP_523357.2| stromal interaction molecule, isoform A [Drosophila melanogaster] gi|17368342|sp|P83094.1|STIM_DROME RecName: Full=Stromal interaction molecule homolog; Flags: Precursor gi|15042568|gb|AAK82338.1|AF328906_1 stromal interaction molecule-like protein STIM [Drosophila melanogaster] gi|17862708|gb|AAL39831.1| LD45776p [Drosophila melanogaster] gi|22832319|gb|AAF48542.2| stromal interaction molecule, isoform A [Drosophila melanogaster] gi|220946412|gb|ACL85749.1| Stim-PA [synthetic construct] gi|220956050|gb|ACL90568.1| Stim-PA [synthetic construct] Back     alignment and taxonomy information
>gi|195355489|ref|XP_002044224.1| GM22508 [Drosophila sechellia] gi|194129513|gb|EDW51556.1| GM22508 [Drosophila sechellia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query60
FB|FBgn0045073 570 Stim "Stromal interaction mole 0.666 0.070 0.8 2.2e-13
UNIPROTKB|E9PIQ8139 STIM1 "Stromal interaction mol 0.633 0.273 0.45 0.00073
UNIPROTKB|E9PJ1981 STIM1 "Stromal interaction mol 0.633 0.469 0.45 0.00073
UNIPROTKB|E9PMB483 STIM1 "Stromal interaction mol 0.633 0.457 0.45 0.00073
UNIPROTKB|E9PR0767 STIM1 "Stromal interaction mol 0.633 0.567 0.45 0.00073
UNIPROTKB|E9PR09117 STIM1 "Stromal interaction mol 0.633 0.324 0.45 0.00073
UNIPROTKB|E9PRE454 STIM1 "Stromal interaction mol 0.633 0.703 0.45 0.00073
UNIPROTKB|E9PRZ7110 STIM1 "Stromal interaction mol 0.633 0.345 0.45 0.00073
FB|FBgn0045073 Stim "Stromal interaction molecule" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 184 (69.8 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 32/40 (80%), Positives = 36/40 (90%)

Query:     3 FLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSE 42
             FLREELKYD G EKRQKAFH NDDMH+SVKELW+ W++SE
Sbjct:   170 FLREELKYDSGYEKRQKAFHFNDDMHISVKELWEAWLRSE 209




GO:0007155 "cell adhesion" evidence=NAS
GO:0005886 "plasma membrane" evidence=NAS
GO:0048763 "calcium-induced calcium release activity" evidence=IMP
GO:0032237 "activation of store-operated calcium channel activity" evidence=IMP
GO:0015279 "store-operated calcium channel activity" evidence=IMP
GO:0051533 "positive regulation of NFAT protein import into nucleus" evidence=IMP
GO:0002115 "store-operated calcium entry" evidence=IMP
GO:0022416 "chaeta development" evidence=IMP
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP
UNIPROTKB|E9PIQ8 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PJ19 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PMB4 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PR07 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PR09 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PRE4 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PRZ7 STIM1 "Stromal interaction molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P83094STIM_DROMENo assigned EC number0.78040.68330.0719yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 60
KOG4403|consensus 575 99.84
>KOG4403|consensus Back     alignment and domain information
Probab=99.84  E-value=2.6e-22  Score=157.10  Aligned_cols=54  Identities=37%  Similarity=0.716  Sum_probs=48.8

Q ss_pred             chhhhhccCCchHHHHHhhhhcCCCcceeHHHHHHHHhhccceecCccceeeccc
Q psy11611          2 SFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCREDAGGQQHGGI   56 (60)
Q Consensus         2 eFLREdl~y~d~~~~r~~~fH~~D~~~ISVedLW~~Wk~Sev~NWT~~~~~~~~~   56 (60)
                      |||||||||+++.++|.++||++|+ ||||+|||++|+.|||||||++++++=-|
T Consensus        92 eFlrEdmky~~~~~kr~~~fH~dD~-~ItVedLWeaW~~Sev~nWT~e~tvqWLi  145 (575)
T KOG4403|consen   92 EFLREDMKYRDSTRKRSEKFHGDDK-HITVEDLWEAWKESEVHNWTNERTVQWLI  145 (575)
T ss_pred             HHHHHHhhcccchhhhhhhccCCcc-ceeHHHHHHHHHhhhhhcchHHHHHHHHH
Confidence            7999999999999777779999777 99999999999999999999999876444




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query60
2k60_A150 Protein (stromal interaction molecule 1); EF-hand, 1e-05
2l5y_A150 Stromal interaction molecule 2; EF-hand, SAM domai 2e-05
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens} Length = 150 Back     alignment and structure
 Score = 38.9 bits (90), Expect = 1e-05
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 2  SFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSE 42
           FLRE+L Y D    +   FH  +D  +SV++LW  W  SE
Sbjct: 39 EFLREDLNYHDPTV-KHSTFH-GEDKLISVEDLWKAWKSSE 77


>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens} Length = 150 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query60
2k60_A150 Protein (stromal interaction molecule 1); EF-hand, 99.85
2l5y_A150 Stromal interaction molecule 2; EF-hand, SAM domai 99.82
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens} Back     alignment and structure
Probab=99.85  E-value=1.1e-22  Score=137.03  Aligned_cols=50  Identities=34%  Similarity=0.670  Sum_probs=47.4

Q ss_pred             chhhhhccCCchHHHHHhhhhcCCCcceeHHHHHHHHhhccceecCccceee
Q psy11611          2 SFLREELKYDDGAEKRQKAFHKNDDMHVSVKELWDVWIKSECCREDAGGQQH   53 (60)
Q Consensus         2 eFLREdl~y~d~~~~r~~~fH~~D~~~ISVedLW~~Wk~Sev~NWT~~~~~~   53 (60)
                      +||||||+|+++. .||++||++|+ +|||+|||++|+.|+|||||+++|++
T Consensus        39 ~flredl~~~d~~-~~~~~fh~~D~-~Isv~eLw~~W~~s~V~nWTvedV~~   88 (150)
T 2k60_A           39 EFLREDLNYHDPT-VKHSTFHGEDK-LISVEDLWKAWKSSEVYNWTVDEVVQ   88 (150)
T ss_dssp             THHHHHTTSSCTH-HHHHHHTSSSC-CEEHHHHHHHHHHSHHHHCCHHHHHH
T ss_pred             HHHHHHhccccch-hhhhcccCCCC-eeeHHHHHHHhccCccccCCHHHHHH
Confidence            7999999999999 69999999888 99999999999999999999999874



>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00