Psyllid ID: psy12377

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
Protein Sequence
MSQTSSFTNNTCSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIFN
Secondary Structure (PSIPRED)
ccccccHHHHHcccccccccccccEEEEEccccHHHHHHHHHHHcccccccccEEEEEccEEccccccccccEEEEEEEccccEEEEEEEcccccEEEEcccccccccccccccEEEEEEcccccEEEEEccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEEEEEccccccccccEEEEEEEEcccEEEEEEEcccEEEEcccccccccccccccccEEEEEEcccccEEEEEEcccccccEEEccccccccccccEEEEEEcccEEccccccccccccccccccccccHHEEHHcc
Coil and Loop (DISEMBL)
msqtssftnntcsstmlprikvgDMFINYISQCPCTLEQALAdkgrflpdydcdidlnpncfynkgarhctnTFQLVLATDEVYSYAIFNYAEiqwtshteaggdttggeggvpayvgfnagngtrsyeyypysqrstIRDLVgrgwangfpgrhifridenimlgtcnkdvasgwlpkihrrfggrcLIEIFN
Flexible Loop (DISEMBL)
msqtssftnntcsstmlpRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDvasgwlpkihrrfggrcLIEIFN
Low Complexity Region (SEG)
MsqtssftnntcsstMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHteaggdttggeggVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIFN
Disordered region (IsUnstruct)
**************TMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIF*
Disordered Region (DISOPRED)
****SSF*NNTCSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIFN
Disordered Region (DISEMBL)
***********CSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIFN
Disordered Region (DISPRO)
********NNTCSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIFN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQTSSFTNNTCSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEIFN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	194	2.2.26 [Sep-21-2011]
Q0KHY3	1431	Extracellular domains-con	yes	N/A	0.567	0.076	0.745	7e-46
P34501	1385	Uncharacterized protein K	yes	N/A	0.448	0.062	0.480	9e-14
Q9YH85	2120	Alpha-tectorin OS=Gallus	no	N/A	0.5	0.045	0.454	1e-12
Q70E20	1403	Sushi, nidogen and EGF-li	yes	N/A	0.742	0.102	0.360	9e-12
Q8TER0	1413	Sushi, nidogen and EGF-li	yes	N/A	0.819	0.112	0.326	1e-11
O08523	2155	Alpha-tectorin OS=Mus mus	no	N/A	0.5	0.045	0.414	1e-11
O75443	2155	Alpha-tectorin OS=Homo sa	no	N/A	0.5	0.045	0.414	1e-11
Q5ZQU0	1403	Sushi, nidogen and EGF-li	no	N/A	0.536	0.074	0.418	3e-11
Q9DBX3	820	Sushi domain-containing p	no	N/A	0.257	0.060	0.5	2e-08
Q9UGT4	822	Sushi domain-containing p	no	N/A	0.273	0.064	0.471	3e-08

>sp|Q0KHY3|Y1004_DROME Extracellular domains-containing protein CG31004 OS=Drosophila melanogaster GN=CG31004 PE=1 SV=1

 Score =  183 bits (464), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 94/110 (85%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           + TNTFQ+VLATDEVY+Y IFNYA + W SHTEAGGDTT GEGGVPAYVGFNAGNGT++Y
Sbjct: 332 YTTNTFQMVLATDEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAY 391

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLP 178
           EY PYSQ   IRDL  RGWANGFPGRHIFR+DE I++G+CNKD+ +  LP
Sbjct: 392 EYNPYSQNMVIRDLANRGWANGFPGRHIFRVDEQILIGSCNKDIDAALLP 441

Drosophila melanogaster (taxid: 7227)

>sp|P34501|YMS5_CAEEL Uncharacterized protein K03H1.5 OS=Caenorhabditis elegans GN=K03H1.5 PE=1 SV=2

 Score = 76.6 bits (187), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 17/104 (16%)

Query: 72  NTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGG-DTTGGEGGVPAYVGFNAGNGTRSYEY 130
           NTFQ+VLA+DE+ ++AIFNYA + WTS  EAGG D  GG+    A  GFN GNGT  Y  
Sbjct: 363 NTFQVVLASDEIRTFAIFNYARLNWTSSNEAGGLDGFGGKQA--AMAGFNGGNGTGWYG- 419

Query: 131 YPYSQRSTIRDLVGRGWANGF------PGRHIFRIDENIMLGTC 168
            PYS         GR W  G+      PGR I R+DE I+   C
Sbjct: 420 LPYSGE-------GRLWKLGYFSNVLTPGRWIHRVDEVIIPAGC 456

Caenorhabditis elegans (taxid: 6239)

>sp|Q9YH85|TECTA_CHICK Alpha-tectorin OS=Gallus gallus GN=TECTA PE=1 SV=1

 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 62  FYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNA 121
           FY   +    NTFQ VL TD V S+AIFNY EI WT+ T +GGD   G GGV A  GFN 
Sbjct: 154 FYGGSSTTPVNTFQAVLITDGVSSFAIFNYQEISWTTGTASGGDPLTGLGGVMAQAGFNG 213

Query: 122 GNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRID 160
           GN +  +   P S+   I ++      N  PGR  F+ID
Sbjct: 214 GNISNFFS-IPGSRTPDIVNIEQTTNVN-IPGRWAFKID 250

One of the major non-collagenous components of the tectorial membrane. The tectorial membrane is an extracellular matrix of the inner ear that covers the neuroepithelium of the cochlea and contacts the stereocilia bundles of specialized sensory hair cells. Sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia and leads to fluctuations in hair-cell membrane potential, transducing sound into electrical signals.

Gallus gallus (taxid: 9031)

>sp|Q70E20|SNED1_MOUSE Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus GN=Sned1 PE=2 SV=2

 Score = 70.1 bits (170), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 21  KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCDIDLNPN----CFYNKGARHCTNT 73
           + GD++    +  P  L +A  D  R+   LPD+              F+   +    NT
Sbjct: 112 RAGDVYYREATD-PAMLNRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSSSSPVNT 170

Query: 74  FQLVLATDEVYSYAIFNYAEIQWT--SHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYY 131
           FQ VL TD  +S+ IFNY  I WT  +H  +GGDT  G GG+ A  GFNAG+G R Y   
Sbjct: 171 FQTVLITDGRFSFTIFNYESILWTTGTHASSGGDTD-GLGGIAAQAGFNAGDGHR-YFNI 228

Query: 132 PYSQRSTIRDLVGRGWANGFPGRHIFRIDE-NIMLGTC 168
           P S+ + + + V      G PGR  FRID+  + +G C
Sbjct: 229 PGSRTADMAE-VETTTNVGVPGRWAFRIDDAQVRVGGC 265

Mus musculus (taxid: 10090)

>sp|Q8TER0|SNED1_HUMAN Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens GN=SNED1 PE=2 SV=2

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 25/184 (13%)

Query: 21  KVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPN----------CFYNKGARHC 70
           + GD++    +  P  L +A  D   + P+    +D N             F+   +   
Sbjct: 112 RAGDVYYREATD-PAMLRRATEDVRHYFPEL---LDFNATWVFVATWYRVTFFGGSSSSP 167

Query: 71  TNTFQLVLATDEVYSYAIFNYAEIQWT--SHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
            NTFQ VL TD   S+ IFNY  I WT  +H  +GG+ T G GG+ A  GFNAG+G R Y
Sbjct: 168 VNTFQTVLITDGKLSFTIFNYESIVWTTGTHASSGGNAT-GLGGIAAQAGFNAGDGQR-Y 225

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDE-NIMLGTC--NKDVASGWLPKIHRRFG 185
              P S+ + + + V      G PGR  FRID+  + +G C     V     P ++   G
Sbjct: 226 FSIPGSRTADMAE-VETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLN---G 281

Query: 186 GRCL 189
           G+C+
Sbjct: 282 GKCI 285

Homo sapiens (taxid: 9606)

>sp|O08523|TECTA_MOUSE Alpha-tectorin OS=Mus musculus GN=Tecta PE=1 SV=2

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 62  FYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNA 121
           FY   +    NTFQ VL +D  Y++ +FNY EI WT+ T +GGD   G GGV A  GFN 
Sbjct: 154 FYGGSSTTPVNTFQAVLVSDGSYTFTLFNYYEINWTTGTASGGDPLTGLGGVMAQAGFNG 213

Query: 122 GNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRID 160
           GN T  +   P S+   I ++      N  PGR  F++D
Sbjct: 214 GNLTNFFS-LPGSRTPEIVNIQETTNVN-VPGRWAFKVD 250

One of the major non-collagenous components of the tectorial membrane (By similarity). The tectorial membrane is an extracellular matrix of the inner ear that covers the neuroepithelium of the cochlea and contacts the stereocilia bundles of specialized sensory hair cells. Sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia and leads to fluctuations in hair-cell membrane potential, transducing sound into electrical signals.

Mus musculus (taxid: 10090)

>sp|O75443|TECTA_HUMAN Alpha-tectorin OS=Homo sapiens GN=TECTA PE=1 SV=3

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 62  FYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNA 121
           FY   +    NTFQ VL +D  Y++ +FNY EI WT+ T +GGD   G GGV A  GFN 
Sbjct: 154 FYGGSSTTPVNTFQAVLVSDGSYTFTLFNYYEINWTTGTASGGDPLTGLGGVMAQAGFNG 213

Query: 122 GNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRID 160
           GN T  +   P S+   I ++      N  PGR  F++D
Sbjct: 214 GNLTNFFS-LPGSRTPEIVNIQETTNVN-VPGRWAFKVD 250

One of the major non-collagenous components of the tectorial membrane (By similarity). The tectorial membrane is an extracellular matrix of the inner ear that covers the neuroepithelium of the cochlea and contacts the stereocilia bundles of specialized sensory hair cells. Sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia and leads to fluctuations in hair-cell membrane potential, transducing sound into electrical signals.

Homo sapiens (taxid: 9606)

>sp|Q5ZQU0|SNED1_RAT Sushi, nidogen and EGF-like domain-containing protein 1 OS=Rattus norvegicus GN=Sned1 PE=2 SV=2

 Score = 68.2 bits (165), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 6/110 (5%)

Query: 62  FYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWT--SHTEAGGDTTGGEGGVPAYVGF 119
           F+   +    NTFQ VL TD  +S+ IFNY  I WT  +H  +GGD   G GG+ A  GF
Sbjct: 159 FFGGSSSSPVNTFQTVLITDGRFSFTIFNYESILWTTGTHASSGGDAD-GLGGIAAQAGF 217

Query: 120 NAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDE-NIMLGTC 168
           NAG+G R Y   P S+ + + + V      G PGR  FRID+  + +G C
Sbjct: 218 NAGDGHR-YFNIPGSRTADMAE-VETTTNVGVPGRWAFRIDDAQVRVGGC 265

Rattus norvegicus (taxid: 10116)

>sp|Q9DBX3|SUSD2_MOUSE Sushi domain-containing protein 2 OS=Mus musculus GN=Susd2 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 30/50 (60%)

Query: 26  FINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQ 75
           F+  +  CPCTL QA AD GRF  DY CDI+    C Y+ GA HC  + Q
Sbjct: 303 FLTELPDCPCTLAQARADSGRFFTDYGCDIEHGSVCTYHPGAVHCVRSVQ 352

Mus musculus (taxid: 10090)

>sp|Q9UGT4|SUSD2_HUMAN Sushi domain-containing protein 2 OS=Homo sapiens GN=SUSD2 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 31/53 (58%)

Query: 26  FINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVL 78
           F+  +  CPCTL QA AD GRF  DY CD++    C Y+ GA HC  + Q  L
Sbjct: 306 FLEELPDCPCTLTQARADSGRFFTDYGCDMEQGSVCTYHPGAVHCVRSVQASL 358

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
307174209	1395	Uncharacterized protein K03H1.5 [Campono	0.634	0.088	0.756	9e-48
332019409	1406	Extracellular domains-containing protein	0.623	0.086	0.735	3e-46
380020283	1377	PREDICTED: extracellular domains-contain	0.623	0.087	0.727	6e-45
328788914	1265	PREDICTED: extracellular domains-contain	0.623	0.095	0.719	1e-44
350417175	1267	PREDICTED: extracellular domains-contain	0.639	0.097	0.692	1e-44
340715043	1267	PREDICTED: extracellular domains-contain	0.639	0.097	0.692	2e-44
307210697	1347	Uncharacterized protein K03H1.5 [Harpegn	0.634	0.091	0.707	2e-44
194905046	1431	GG11883 [Drosophila erecta] gi|190655749	0.567	0.076	0.745	3e-44
195341700	1431	GM12101 [Drosophila sechellia] gi|194131	0.567	0.076	0.745	3e-44
24651583	1431	CG31004, isoform A [Drosophila melanogas	0.567	0.076	0.745	3e-44

>gi|307174209|gb|EFN64854.1| Uncharacterized protein K03H1.5 [Camponotus floridanus]

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 93/123 (75%), Positives = 100/123 (81%)

Query: 67  ARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTR 126
           A   TNTFQLVLATDEV++YAIFNY  I+WTSHTEAGGDTT GE GVPAYVGFNAGNGT+
Sbjct: 314 ALQTTNTFQLVLATDEVFTYAIFNYLNIKWTSHTEAGGDTTQGENGVPAYVGFNAGNGTQ 373

Query: 127 SYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGG 186
           SYEY PYSQ +TIRDL  RGWANGFPGRHIFRIDE IMLGTCNKD+A   LP +     G
Sbjct: 374 SYEYKPYSQATTIRDLTSRGWANGFPGRHIFRIDEKIMLGTCNKDIAGAHLPLVFAPESG 433

Query: 187 RCL 189
             L
Sbjct: 434 NML 436

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019409|gb|EGI59893.1| Extracellular domains-containing protein [Acromyrmex echinatior]

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/121 (73%), Positives = 98/121 (80%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           H TNTFQL+LATDEV++Y IFNY  I+WTSHTEAGGDTT GE GV A+VGFNAGNGT+SY
Sbjct: 342 HTTNTFQLILATDEVFTYVIFNYLNIKWTSHTEAGGDTTQGENGVAAFVGFNAGNGTQSY 401

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRC 188
           EY PYSQ +TIRDL  RGWANGFPGRHIFRIDE IMLGTCNKD+A   LP +     G  
Sbjct: 402 EYKPYSQATTIRDLTSRGWANGFPGRHIFRIDEKIMLGTCNKDIAGAHLPLVFAPESGNM 461

Query: 189 L 189
           L
Sbjct: 462 L 462

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020283|ref|XP_003694019.1| PREDICTED: extracellular domains-containing protein CG31004-like [Apis florea]

 Score =  185 bits (470), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 88/121 (72%), Positives = 97/121 (80%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           + TNTFQ+VLATDEV +Y IFNY +IQWTSHTEAGGDTT GEGGVPA+VGFNAGNGTRSY
Sbjct: 314 YITNTFQMVLATDEVNTYVIFNYLDIQWTSHTEAGGDTTRGEGGVPAFVGFNAGNGTRSY 373

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRC 188
           EY PYSQ S+IRDL GRGWAN FPGRH+FRIDE I+   CNKD+A   LP I     G  
Sbjct: 374 EYKPYSQMSSIRDLTGRGWANKFPGRHMFRIDERILPAVCNKDIAGSNLPLIFAPESGNM 433

Query: 189 L 189
           L
Sbjct: 434 L 434

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788914|ref|XP_392408.3| PREDICTED: extracellular domains-containing protein CG31004-like isoform 1 [Apis mellifera]

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/121 (71%), Positives = 99/121 (81%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           + TNTFQ+VLATDEV +YAIFNY +IQWTSHTEAGGDTT GEGGVPA+VGFNAGNGT+SY
Sbjct: 335 YITNTFQMVLATDEVNTYAIFNYLDIQWTSHTEAGGDTTRGEGGVPAFVGFNAGNGTQSY 394

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRC 188
           EY P+SQRS+IRDL GRGWAN FPGRH+FRIDE I+   CNKD+A   LP +     G  
Sbjct: 395 EYKPFSQRSSIRDLTGRGWANNFPGRHMFRIDEIILPAVCNKDIAGSNLPLVFAPESGNM 454

Query: 189 L 189
           L
Sbjct: 455 L 455

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417175|ref|XP_003491293.1| PREDICTED: extracellular domains-containing protein CG31004-like [Bombus impatiens]

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/130 (69%), Positives = 99/130 (76%), Gaps = 6/130 (4%)

Query: 60  NCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGF 119
           N  YN      TNTFQ+VLATDEV +Y IFNY  IQW+SHTEAGGDT  GEGGVPA+VGF
Sbjct: 335 NSLYN------TNTFQMVLATDEVNTYVIFNYLNIQWSSHTEAGGDTMYGEGGVPAFVGF 388

Query: 120 NAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPK 179
           NAGNGTRSYEY P+SQ STIRDL GRGWANGFPGRH+FRIDENIM   CNKD++   LP 
Sbjct: 389 NAGNGTRSYEYKPFSQMSTIRDLTGRGWANGFPGRHMFRIDENIMPAVCNKDISGANLPL 448

Query: 180 IHRRFGGRCL 189
           +     G  L
Sbjct: 449 VFAPESGNML 458

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715043|ref|XP_003396030.1| PREDICTED: extracellular domains-containing protein CG31004-like [Bombus terrestris]

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/130 (69%), Positives = 99/130 (76%), Gaps = 6/130 (4%)

Query: 60  NCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGF 119
           N  YN      TNTFQ+VLATDEV +Y IFNY  IQW+SHTEAGGDT  GEGGVPA+VGF
Sbjct: 335 NSLYN------TNTFQMVLATDEVNTYVIFNYLNIQWSSHTEAGGDTMYGEGGVPAFVGF 388

Query: 120 NAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPK 179
           NAGNGTRSYEY P+SQ STIRDL GRGWANGFPGRH+FRIDENIM   CNKD++   LP 
Sbjct: 389 NAGNGTRSYEYKPFSQMSTIRDLTGRGWANGFPGRHMFRIDENIMPAVCNKDISGANLPL 448

Query: 180 IHRRFGGRCL 189
           +     G  L
Sbjct: 449 VFAPESGNML 458

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307210697|gb|EFN87120.1| Uncharacterized protein K03H1.5 [Harpegnathos saltator]

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 87/123 (70%), Positives = 98/123 (79%)

Query: 67  ARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTR 126
           A + TNTFQ+VLATDEVY+YAIFNY  +QW SHTEAGGDTT GE GVPAYVGFNAGNGTR
Sbjct: 345 ALYKTNTFQMVLATDEVYTYAIFNYLNLQWLSHTEAGGDTTQGENGVPAYVGFNAGNGTR 404

Query: 127 SYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGG 186
           SYEY PYSQ +T+RDL  RGWAN FPGRHIFRIDE+I+LG CNKD +   +P +     G
Sbjct: 405 SYEYKPYSQMTTVRDLPNRGWANKFPGRHIFRIDEDIILGNCNKDNSGAHIPLVFAPESG 464

Query: 187 RCL 189
             L
Sbjct: 465 NML 467

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194905046|ref|XP_001981111.1| GG11883 [Drosophila erecta] gi|190655749|gb|EDV52981.1| GG11883 [Drosophila erecta]

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 94/110 (85%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           + TNTFQ+VLATDEVY+Y IFNYA + W SHTEAGGDTT GEGGVPAYVGFNAGNGT++Y
Sbjct: 332 YTTNTFQMVLATDEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAY 391

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLP 178
           EY PYSQ   IRDL  RGWANGFPGRHIFR+DE I++G+CNKD+ +  LP
Sbjct: 392 EYKPYSQNMVIRDLANRGWANGFPGRHIFRVDEQILIGSCNKDIDAALLP 441

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195341700|ref|XP_002037444.1| GM12101 [Drosophila sechellia] gi|194131560|gb|EDW53603.1| GM12101 [Drosophila sechellia]

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 94/110 (85%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           + TNTFQ+VLATDEVY+Y IFNYA + W SHTEAGGDTT GEGGVPAYVGFNAGNGT++Y
Sbjct: 332 YTTNTFQMVLATDEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAY 391

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLP 178
           EY PYSQ   IRDL  RGWANGFPGRHIFR+DE I++G+CNKD+ +  LP
Sbjct: 392 EYRPYSQNMVIRDLANRGWANGFPGRHIFRVDEQILIGSCNKDIDAALLP 441

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24651583|ref|NP_733418.1| CG31004, isoform A [Drosophila melanogaster] gi|24651585|ref|NP_733419.1| CG31004, isoform B [Drosophila melanogaster] gi|122065794|sp|Q0KHY3.1|Y1004_DROME RecName: Full=Extracellular domains-containing protein CG31004; Flags: Precursor gi|23172752|gb|AAF57124.2| CG31004, isoform A [Drosophila melanogaster] gi|23172753|gb|AAF57123.2| CG31004, isoform B [Drosophila melanogaster] gi|374275919|gb|AEZ02857.1| FI18817p1 [Drosophila melanogaster]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 94/110 (85%)

Query: 69  HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           + TNTFQ+VLATDEVY+Y IFNYA + W SHTEAGGDTT GEGGVPAYVGFNAGNGT++Y
Sbjct: 332 YTTNTFQMVLATDEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAY 391

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLP 178
           EY PYSQ   IRDL  RGWANGFPGRHIFR+DE I++G+CNKD+ +  LP
Sbjct: 392 EYNPYSQNMVIRDLANRGWANGFPGRHIFRVDEQILIGSCNKDIDAALLP 441

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
FB|FBgn0051004	1431	mesh "mesh" [Drosophila melano	0.567	0.076	0.636	1.3e-35
UNIPROTKB|F1PJ59	1408	SNED1 "Uncharacterized protein	0.835	0.115	0.314	2.8e-12
UNIPROTKB|F1PJ58	1419	SNED1 "Uncharacterized protein	0.835	0.114	0.314	2.8e-12
UNIPROTKB|E1C4G9	1182	E1C4G9 "Uncharacterized protei	0.835	0.137	0.314	9.7e-12
UNIPROTKB|E1B8G8	1324	E1B8G8 "Uncharacterized protei	0.835	0.122	0.303	1e-10
UNIPROTKB|G3N3S9	1334	G3N3S9 "Uncharacterized protei	0.835	0.121	0.303	1e-10
WB|WBGene00010540	1385	K03H1.5 [Caenorhabditis elegan	0.520	0.072	0.388	2.2e-10
UNIPROTKB|F1SI04	1414	SNED1 "Uncharacterized protein	0.835	0.114	0.298	2.9e-10
MGI|MGI:1918983	820	Susd2 "sushi domain containing	0.257	0.060	0.5	3.4e-10
MGI|MGI:3045960	1403	Sned1 "sushi, nidogen and EGF-	0.835	0.115	0.298	6.1e-10

FB|FBgn0051004 mesh "mesh" [Drosophila melanogaster (taxid:7227)]

 Score = 398 (145.2 bits), Expect = 1.3e-35, P = 1.3e-35
 Identities = 70/110 (63%), Positives = 82/110 (74%)

Query:    69 HCTNTFQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXXVPAYVGFNAGNGTRSY 128
             + TNTFQ+VLATDEVY+Y IFNYA + W SH             VPAYVGFNAGNGT++Y
Sbjct:   332 YTTNTFQMVLATDEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAY 391

Query:   129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENIMLGTCNKDVASGWLP 178
             EY PYSQ   IRDL  RGWANGFPGRHIFR+DE I++G+CNKD+ +  LP
Sbjct:   392 EYNPYSQNMVIRDLANRGWANGFPGRHIFRVDEQILIGSCNKDIDAALLP 441

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0019991 "septate junction assembly" evidence=IMP

GO:0005920 "smooth septate junction" evidence=IDA

GO:0007156 "homophilic cell adhesion" evidence=IMP

GO:0061028 "establishment of endothelial barrier" evidence=IMP

UNIPROTKB|F1PJ59 SNED1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 57/181 (31%), Positives = 82/181 (45%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCDIDLNPN----CFYNKGARHCTNT 73
             + GD++    +  P TL +A  D  R+   LPD+              F+   A    NT
Sbjct:   112 RAGDVYYREATD-PATLRRATEDVRRYFPELPDFSATWVFIATWYRVTFFGGSASSPVNT 170

Query:    74 FQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYYP 132
             FQ VL TD  +S+ IFNY  I WT+               + A  GFNAG+G R Y   P
Sbjct:   171 FQTVLITDGKFSFTIFNYESITWTTGTHASSGGDSTGLGGIAAQAGFNAGDGRR-YFSIP 229

Query:   133 YSQRSTIRDLVGRGWAN-GFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
              S+ + + D+      N G PGR  FRID+  + +G C+    V     P ++   GG+C
Sbjct:   230 GSRTADMADV--ETTTNVGVPGRWAFRIDDAQVRVGGCSHTTSVCLALRPCLN---GGKC 284

Query:   189 L 189
             +
Sbjct:   285 I 285

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1PJ58 SNED1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 57/181 (31%), Positives = 82/181 (45%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCDIDLNPN----CFYNKGARHCTNT 73
             + GD++    +  P TL +A  D  R+   LPD+              F+   A    NT
Sbjct:   112 RAGDVYYREATD-PATLRRATEDVRRYFPELPDFSATWVFIATWYRVTFFGGSASSPVNT 170

Query:    74 FQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYYP 132
             FQ VL TD  +S+ IFNY  I WT+               + A  GFNAG+G R Y   P
Sbjct:   171 FQTVLITDGKFSFTIFNYESITWTTGTHASSGGDSTGLGGIAAQAGFNAGDGRR-YFSIP 229

Query:   133 YSQRSTIRDLVGRGWAN-GFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
              S+ + + D+      N G PGR  FRID+  + +G C+    V     P ++   GG+C
Sbjct:   230 GSRTADMADV--ETTTNVGVPGRWAFRIDDAQVRVGGCSHTTSVCLALRPCLN---GGKC 284

Query:   189 L 189
             +
Sbjct:   285 I 285

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|E1C4G9 E1C4G9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 173 (66.0 bits), Expect = 9.7e-12, P = 9.7e-12
 Identities = 57/181 (31%), Positives = 81/181 (44%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLN--------PNCFYNKGARHCTN 72
             + GD++    SQ    LE+A  D  R+ P++  D               F+   +    N
Sbjct:   110 RAGDVYYRE-SQDRAILERATRDIARYFPEFP-DFSAQWVFIATWYRVTFFGGSSFSPVN 167

Query:    73 TFQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYY 131
             TFQ+VL TD   S+ IFNY  I WT+               + A  GFNAG+G R Y   
Sbjct:   168 TFQIVLITDGKLSFTIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKR-YFNI 226

Query:   132 PYSQRSTIRDLVGRGWANGFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
             P S+   I D V      G PGR +FRID+  + +G C+    V     P ++   GG+C
Sbjct:   227 PGSRTDDIAD-VEMTTNVGIPGRWVFRIDDAQVQVGGCSNTTSVCLTLRPCLN---GGKC 282

Query:   189 L 189
             +
Sbjct:   283 I 283

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

UNIPROTKB|E1B8G8 E1B8G8 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 164 (62.8 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 55/181 (30%), Positives = 79/181 (43%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCDIDLNPN----CFYNKGARHCTNT 73
             + GD++    +    TL +A AD  R+   LP +              F+   A    NT
Sbjct:    41 RAGDVYFREATDA-ATLRRATADVRRYFPELPGFSATWVFVATWYRVTFFGGSASSPVNT 99

Query:    74 FQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYYP 132
             FQ VL TD   S+ IFNY  I WT+               + A  GFNAG+G R Y   P
Sbjct:   100 FQTVLITDGTLSFTIFNYESITWTTGTHASSGGNASGLGGIAAQAGFNAGDGQR-YFSIP 158

Query:   133 YSQRSTIRDLVGRGWAN-GFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
              S+ + + ++      N G PGR  FRID+  + +G C     V     P ++   GG+C
Sbjct:   159 GSRTADMAEV--ETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCQTLRPCLN---GGKC 213

Query:   189 L 189
             +
Sbjct:   214 I 214

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|G3N3S9 G3N3S9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 164 (62.8 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 55/181 (30%), Positives = 79/181 (43%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCDIDLNPN----CFYNKGARHCTNT 73
             + GD++    +    TL +A AD  R+   LP +              F+   A    NT
Sbjct:    41 RAGDVYFREATDA-ATLRRATADVRRYFPELPGFSATWVFVATWYRVTFFGGSASSPVNT 99

Query:    74 FQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYYP 132
             FQ VL TD   S+ IFNY  I WT+               + A  GFNAG+G R Y   P
Sbjct:   100 FQTVLITDGTLSFTIFNYESITWTTGTHASSGGNASGLGGIAAQAGFNAGDGQR-YFSIP 158

Query:   133 YSQRSTIRDLVGRGWAN-GFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
              S+ + + ++      N G PGR  FRID+  + +G C     V     P ++   GG+C
Sbjct:   159 GSRTADMAEV--ETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCQTLRPCLN---GGKC 213

Query:   189 L 189
             +
Sbjct:   214 I 214

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00010540 K03H1.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 161 (61.7 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 42/108 (38%), Positives = 54/108 (50%)

Query:    72 NTFQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXXVPAYVGFNAGNGTRSYEYY 131
             NTFQ+VLA+DE+ ++AIFNYA + WTS                A  GFN GNGT  Y   
Sbjct:   363 NTFQVVLASDEIRTFAIFNYARLNWTSSNEAGGLDGFGGKQA-AMAGFNGGNGTGWYGL- 420

Query:   132 PYSQRSTIRDLVGRGWANGF--PGRHIFRIDENIMLGTCNKDVASGWL 177
             PYS    +  L   G+ +    PGR I R+DE I+   C      G +
Sbjct:   421 PYSGEGRLWKL---GYFSNVLTPGRWIHRVDEVIIPAGCTNASNGGMM 465

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SI04 SNED1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 160 (61.4 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 54/181 (29%), Positives = 80/181 (44%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCD----IDLNPNCFYNKGARHCTNT 73
             + GD++    +    TL +A  D  R+   LP +          +   FY   +    NT
Sbjct:   112 RAGDVYYREATDA-ATLRRATGDIRRYFPELPGFSATWVFIATWHRVTFYGGSSSSPVNT 170

Query:    74 FQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYYP 132
             FQ VL TD   S+ IFNY  I WT+               + A  GFNAG+G R Y   P
Sbjct:   171 FQTVLITDGRLSFTIFNYETITWTTGTHASSGGNATGLGGIAAQAGFNAGDGRR-YFSIP 229

Query:   133 YSQRSTIRDLVGRGWAN-GFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
              S+ + + ++      N G PGR  FRID+  + +G C+    V     P ++   GG+C
Sbjct:   230 GSRTADVAEV--ETTTNVGVPGRWAFRIDDAQVRVGGCSHTTSVCLALRPCLN---GGKC 284

Query:   189 L 189
             +
Sbjct:   285 I 285

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:1918983 Susd2 "sushi domain containing 2" [Mus musculus (taxid:10090)]

 Score = 142 (55.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
 Identities = 25/50 (50%), Positives = 30/50 (60%)

Query:    26 FINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQ 75
             F+  +  CPCTL QA AD GRF  DY CDI+    C Y+ GA HC  + Q
Sbjct:   303 FLTELPDCPCTLAQARADSGRFFTDYGCDIEHGSVCTYHPGAVHCVRSVQ 352

GO:0003674 "molecular_function" evidence=ND

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006955 "immune response" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030247 "polysaccharide binding" evidence=IEA

MGI|MGI:3045960 Sned1 "sushi, nidogen and EGF-like domains 1" [Mus musculus (taxid:10090)]

 Score = 157 (60.3 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 54/181 (29%), Positives = 80/181 (44%)

Query:    21 KVGDMFINYISQCPCTLEQALADKGRF---LPDYDCDIDLNPN----CFYNKGARHCTNT 73
             + GD++    +  P  L +A  D  R+   LPD+              F+   +    NT
Sbjct:   112 RAGDVYYREATD-PAMLNRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSSSSPVNT 170

Query:    74 FQLVLATDEVYSYAIFNYAEIQWTSHXXXXXXXXXXXXX-VPAYVGFNAGNGTRSYEYYP 132
             FQ VL TD  +S+ IFNY  I WT+               + A  GFNAG+G R Y   P
Sbjct:   171 FQTVLITDGRFSFTIFNYESILWTTGTHASSGGDTDGLGGIAAQAGFNAGDGHR-YFNIP 229

Query:   133 YSQRSTIRDLVGRGWAN-GFPGRHIFRIDE-NIMLGTCNK--DVASGWLPKIHRRFGGRC 188
              S+ + + ++      N G PGR  FRID+  + +G C     V     P ++   GG+C
Sbjct:   230 GSRTADMAEV--ETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLN---GGKC 284

Query:   189 L 189
             +
Sbjct:   285 I 285

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0KHY3	Y1004_DROME	No assigned EC number	0.7454	0.5670	0.0768	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	194
pfam06119	90	pfam06119, NIDO, Nidogen-like	3e-29
smart00539	152	smart00539, NIDO, Extracellular domain of unknown	1e-24
pfam03782	138	pfam03782, AMOP, AMOP domain	3e-14
smart00723	154	smart00723, AMOP, Adhesion-associated domain prese	3e-13

>gnl|CDD|147987 pfam06119, NIDO, Nidogen-like

 Score =  103 bits (259), Expect = 3e-29
 Identities = 46/93 (49%), Positives = 56/93 (60%), Gaps = 6/93 (6%)

Query: 71  TNTFQLVLATDEVYSYAIFNYAE--IQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSY 128
           TNTFQ VLATD   S+AIF Y E  IQWT+ T   GD   G GGVPA  GF+AG+G R +
Sbjct: 1   TNTFQAVLATDGSDSFAIFLYPEDGIQWTTGTA--GDGLNGLGGVPAQAGFSAGDGNRFF 58

Query: 129 EYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDE 161
              P S+  ++R+L       G PGR IFR+  
Sbjct: 59  T-LPGSRTESVRNLAQS-SNVGVPGRWIFRVGG 89

This is a nidogen-like domain (NIDO) domain and is an extracellular domain found in nidogen and hypothetical proteins of unknown function. Length = 90

>gnl|CDD|214712 smart00539, NIDO, Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins

 Score = 93.6 bits (233), Expect = 1e-24
 Identities = 38/101 (37%), Positives = 44/101 (43%), Gaps = 11/101 (10%)

Query: 62  FYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNA 121
            Y   +   TNTFQ VLATD   +YAIF Y  + WTS T AGGD      GV A  GFN 
Sbjct: 57  AYGSQSSDGTNTFQAVLATDGSRTYAIFLYPSLGWTSDTTAGGDD-----GVRARAGFNG 111

Query: 122 GNGT------RSYEYYPYSQRSTIRDLVGRGWANGFPGRHI 156
           G+GT       S E    +        +   W     G  I
Sbjct: 112 GDGTFSYTLPASGEENIKNLAEGSNVGIPGRWMFRVDGAEI 152

Length = 152

>gnl|CDD|146428 pfam03782, AMOP, AMOP domain

 Score = 65.9 bits (161), Expect = 3e-14
 Identities = 22/38 (57%), Positives = 25/38 (65%)

Query: 33 CPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHC 70
          CPC+L QA+AD GRF PD DC       C Y+ GARHC
Sbjct: 26 CPCSLPQAVADLGRFFPDRDCSGPKERLCIYHPGARHC 63

This domain may have a role in cell adhesion. It is called the AMOP domain after Adhesion associated domain in MUC4 and Other Proteins. This domain is extracellular and contains a number of cysteines that probably form disulphide bridges. Length = 138

>gnl|CDD|128962 smart00723, AMOP, Adhesion-associated domain present in MUC4 and other proteins

 Score = 63.8 bits (155), Expect = 3e-13
 Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 33  CPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLAT--DEVYSYAIFN 90
           CPC+L QA+AD GRF PD  CD D    C Y+ GARHC  + Q V +T   +V  Y    
Sbjct: 32  CPCSLPQAVADSGRFRPDDACDPDERILCTYHPGARHCIRSMQSVESTGAGQVCCYD--A 89

Query: 91  YAEIQWTSHTEAGGDTTGGEGGVPAYVG 118
           + ++  T          G   G P Y+G
Sbjct: 90  WGQLMTTDDQPVIKPRRGHGAGTPPYIG 117

Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	194
smart00539	152	NIDO Extracellular domain of unknown function in n	100.0
PF06119	90	NIDO: Nidogen-like; InterPro: IPR003886 The ~180-r	99.96
KOG4291|consensus	1043		99.96
KOG1214|consensus	1289		99.62
PF03782	151	AMOP: AMOP domain; InterPro: IPR005533 This domain	93.98
KOG3848|consensus	516		80.98

>smart00539 NIDO Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins

Probab=100.00  E-value=1.1e-42  Score=278.44  Aligned_cols=141  Identities=35%  Similarity=0.520  Sum_probs=126.3

Q ss_pred             CCCCCCc-cccEEEEeecCChhHHHHHHHHHhhcCCCC-------cceEeccccccCCCCCCccCceeeEEEEecCCceE
Q psy12377         15 TMLPRIK-VGDMFINYISQCPCTLEQALADKGRFLPDY-------DCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSY   86 (194)
Q Consensus        15 w~d~~~~-~G~VyYre~~~~p~vL~rAt~dI~~~fp~~-------~fvvTW~~V~~y~~~~~~~~NTFQaVLitdg~~Sf   86 (194)
                      |.|++.+ .|+||||| ++|+.+|.||+++||++||+.       .|||||++|++|+.....++||||+||++||..||
T Consensus         3 ~~d~d~~~~G~V~yre-~~d~~~L~ra~~~v~~~f~~~~~F~a~~v~vvTW~~V~~~~~~~~~~~NTFQ~VL~tdg~~sf   81 (152)
T smart00539        3 WADADTEGTGKVYYRE-TTDHAILDRATESVREGFTDMGGFRAKSVVIVTWENVAAYGSQSSDGTNTFQAVLATDGSRTY   81 (152)
T ss_pred             ccccCCCCCCCEEEEE-eCCHHHHHHHHHHHHHHCCCCcCcceeEEEEEECcCcccccccCCCCCceeEEEEEECCCceE
Confidence            8888874 79999999 799999999999999999983       46999999999985544479999999999999999


Q ss_pred             EEEEcCccceecccccCCCCCCCCCCcceEEEEeecCCceeEEEecCCCcchhhhhhccCCCCCCCceEEEEecCce
Q psy12377         87 AIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENI  163 (194)
Q Consensus        87 alF~Y~~iqW~~~~~~~~~~~~g~~g~~A~aGf~~Gdg~~~~~~lp~S~t~~v~~l~~~SN~~g~~G~W~frid~~~  163 (194)
                      |+|+|++|+|..+..+++.     .+.+|||||++||+..+|. ||+|+++++++|...|| +|+||+|+||||+..
T Consensus        82 a~f~Y~~~~~~~~~~~~~~-----~~~~a~aGF~~Gdg~~~~~-lp~S~~~~~~~L~~~sN-~g~~G~w~frid~~~  151 (152)
T smart00539       82 AIFLYPSLGWTSDTTAGGD-----DGVRARAGFNGGDGTFSYT-LPASGEENIKNLAEGSN-VGIPGRWMFRVDGAE  151 (152)
T ss_pred             EEEEecCCCceeecccCCC-----CCcceeEEEeccCCceeEE-CCCCCCcchhhhhhcCC-CCCceEEEEEeCCcc
Confidence            9999999988887666543     2789999999999988886 99999999999999998 999999999999874

>PF06119 NIDO: Nidogen-like; InterPro: IPR003886 The ~180-residue NIDO domain is an extracellular domain of unknown function, found in nidogen (entactin) and hypothetical proteins

Probab=99.96  E-value=1.6e-29  Score=186.15  Aligned_cols=88  Identities=55%  Similarity=0.895  Sum_probs=80.7

Q ss_pred             CceeeEEEEecCCceEEEEEcCc--cceecccccCCCCCCCCCCcceEEEEeecCCceeEEEecCCCcchhhhhhccCCC
Q psy12377         71 TNTFQLVLATDEVYSYAIFNYAE--IQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWA  148 (194)
Q Consensus        71 ~NTFQaVLitdg~~SfalF~Y~~--iqW~~~~~~~~~~~~g~~g~~A~aGf~~Gdg~~~~~~lp~S~t~~v~~l~~~SN~  148 (194)
                      +|||||||+||+..|||+|+|++  |+|++....++  .+++++.+|+|||++||+..+|. +|+|+++++.+|...|| 
T Consensus         1 tNTFQ~VL~tdg~~Sfalf~Y~~~gi~W~~~~~~~~--~~~~~~~~a~aGf~~gd~~~~~~-lp~s~t~~i~~l~~~sN-   76 (90)
T PF06119_consen    1 TNTFQAVLATDGSRSFALFNYPDGGIQWTTGDAGGG--YNGLGGVPAQAGFNSGDGTNYYN-LPGSGTDSIRNLDNSSN-   76 (90)
T ss_pred             CeEEEEEEEECCCceEEEEEeCCCCEeeEecccccc--cccceeeeeEEEEecCCCcceEE-ecCCCccceeehhhcCC-
Confidence            69999999999999999999998  99999876333  46788999999999999998997 99999999999999998 


Q ss_pred             CCCCceEEEEecCc
Q psy12377        149 NGFPGRHIFRIDEN  162 (194)
Q Consensus       149 ~g~~G~W~frid~~  162 (194)
                      +|+||+|+||||++
T Consensus        77 ~g~~G~wifrid~~   90 (90)
T PF06119_consen   77 VGVPGRWIFRIDSE   90 (90)
T ss_pred             CCCCEEEEEEeCCC
Confidence            99999999999974

The NIDO domain is found in association with other domains, such as nidogen G2 beta-barrel (IPR006605 from INTERPRO), thyroglobulin type-1 (IPR000716 from INTERPRO), LDLRB (IPR000033 from INTERPRO), AMOP (IPR005533 from INTERPRO), EGF-like (IPR000742 from INTERPRO), VWFD, IPT/TIG, or sushi/CCP/SCR (IPR000436 from INTERPRO) [, , , ]. Some proteins known to contain a NIDO domain are listed below: Vertebrate nidogen-1 (NID-1) or entactin, a sulphated glycoprotein widely distributed in basement membranes. Vertebrate nidogen-2 (NID-2) or osteonidogen, a cell adhesion glycoprotein which is widely distributed in basement membranes. Vertebrate alpha-tectorin. Mammalian mucin-4 (MUC4), a highly glycosylated membrane-bound protein. Xenopus ID14, a putative matrix protein. ; GO: 0007160 cell-matrix adhesion

>KOG4291|consensus

Probab=99.96  E-value=4.1e-29  Score=246.20  Aligned_cols=183  Identities=32%  Similarity=0.451  Sum_probs=159.8

Q ss_pred             cccccccccCCCCCCCCCc-cccEEE-EeecCChhHHHHHHHHHhhcCCCC-------cceEecc-ccccCCCCCCccCc
Q psy12377          3 QTSSFTNNTCSSTMLPRIK-VGDMFI-NYISQCPCTLEQALADKGRFLPDY-------DCDIDLN-PNCFYNKGARHCTN   72 (194)
Q Consensus         3 ~~~~~~~~~~~~w~d~~~~-~G~VyY-re~~~~p~vL~rAt~dI~~~fp~~-------~fvvTW~-~V~~y~~~~~~~~N   72 (194)
                      |+.+|+   |+-|.++.-+ +|.||| ++ .+++.+|.|.+.|||+++.++       .|||||+ .+..+.......+|
T Consensus       199 ~~~~f~---~~f~~~~~~~~pG~i~~~~d-~~~~~~l~~~~~dire~~~~a~tF~a~~a~IvTW~~a~~~~~~s~~~~~n  274 (1043)
T KOG4291|consen  199 YSTAFF---APFWSKVCPGTPGVIYYRCD-SDDDGVLDRITRDIREGVAGAATFRAFHALIVTWYRAASFRGNSDAENPN  274 (1043)
T ss_pred             cCcccc---ccccccccCCCCceEEeecc-cccHHHHHHHHHHHHHhhccccccCcceEEEEEhhhhhhhccccccCCCC
Confidence            444554   4556655554 799999 66 899999999999999999775       5699999 56666655667899


Q ss_pred             eeeEEEEecCCceEEEEEcCccceeccc-ccCCCCCCCCCCcceEEEEeecCCceeEEEecCCCcchhhhhhccCCCCCC
Q psy12377         73 TFQLVLATDEVYSYAIFNYAEIQWTSHT-EAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGF  151 (194)
Q Consensus        73 TFQaVLitdg~~SfalF~Y~~iqW~~~~-~~~~~~~~g~~g~~A~aGf~~Gdg~~~~~~lp~S~t~~v~~l~~~SN~~g~  151 (194)
                      |||+||++|+..+|++|+|..|+|+++. ..++++..|+++..|++||++|+++..|. +|+|+++.|.+|.+.+| +++
T Consensus       275 TfQ~vlvsD~~~Tfa~F~y~~l~wts~~~~~~g~~~~g~~~~~~qagfn~G~~t~~~~-~P~s~t~~i~~~~sg~~-v~~  352 (1043)
T KOG4291|consen  275 TFQAVLVSDRIYTFAIFNYYYLNWTSGAVEFGGDGRAGRCGVSAQAGFNAGNGTVDFS-LPYSQTPNILALRSGTN-VGD  352 (1043)
T ss_pred             cceeEEEecCcceeEEEeecCcccCCCcccccCCCcccceeeEEeeeecCCCcccccc-ccCCCCceeEecccccc-ccC
Confidence            9999999999999999999999999997 77777778899999999999999999998 89999999999998887 999


Q ss_pred             CceEEEEecCceecCCccCCCCCCccceEEecCCceeEeEe
Q psy12377        152 PGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEI  192 (194)
Q Consensus       152 ~G~W~frid~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~  192 (194)
                      ||+||||+|+.++.++|.++. +.++|..++|..++|++++
T Consensus       353 PGr~~frvd~~~~~~~c~~~~-g~~~~~~~~p~~~n~~~g~  392 (1043)
T KOG4291|consen  353 PGRWMFRVDEVVRSAGCTNDI-GGTYPMTCAPVCGNMLGGR  392 (1043)
T ss_pred             CcccceecCCeecccccccCc-CCccceeecCCCCcccCCc
Confidence            999999999998887799887 8899999999999999876

>KOG1214|consensus

Probab=99.62  E-value=1.8e-15  Score=145.18  Aligned_cols=132  Identities=24%  Similarity=0.321  Sum_probs=106.3

Q ss_pred             cccEEEEeecCChhHHHHHHHHHhhcCCC-Ccc------eEeccccccCCCC-----CCccCceeeEEEEecCCceEEEE
Q psy12377         22 VGDMFINYISQCPCTLEQALADKGRFLPD-YDC------DIDLNPNCFYNKG-----ARHCTNTFQLVLATDEVYSYAIF   89 (194)
Q Consensus        22 ~G~VyYre~~~~p~vL~rAt~dI~~~fp~-~~f------vvTW~~V~~y~~~-----~~~~~NTFQaVLitdg~~SfalF   89 (194)
                      .|+|+||| ++.|....+|...|.+.||. +.|      ++|| .|++|...     ...+.|||||||+++++.|||||
T Consensus       115 ~~~~~~~e-~~sp~~~~~a~~~v~~~~~~~lrf~ys~~~v~t~-~~a~~q~p~~~~~~~g~~NtFQavlas~~s~syAlf  192 (1289)
T KOG1214|consen  115 DGEVHYRE-DTSPGNVHTAASKVPAGFPRPLRFLYSHAGVMTE-LVAAYQSPNRGALPSGELNTFQAVLASDGSDSYALF  192 (1289)
T ss_pred             CceeEEec-cCCcchhhhhhhhhhccCCCceeeecccccceee-ecccccccccCccccccccceeeeeecCCCccEEEE
Confidence            57999999 99999999999999999985 344      7885 56666532     23589999999999999999999


Q ss_pred             EcCc--cceecccccCCCCCCCCCCcceEEEEeecCCc-------eeEEEecCCCcchhhhhhccCCCCCCCceEEEEec
Q psy12377         90 NYAE--IQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGT-------RSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRID  160 (194)
Q Consensus        90 ~Y~~--iqW~~~~~~~~~~~~g~~g~~A~aGf~~Gdg~-------~~~~~lp~S~t~~v~~l~~~SN~~g~~G~W~frid  160 (194)
                      +|+.  ||+.+. +++.+    ...+||++||.+|...       .||  .-.+.++.++||...|| .|++|+|+|.|+
T Consensus       193 lyp~~glqf~~t-fsk~~----~nq~pa~v~F~~G~~~dlaks~g~yf--~~~~~e~s~enl~~lsn-~g~~gVwvf~iG  264 (1289)
T KOG1214|consen  193 LYPANGLQFLGT-FSKES----YNQLPARVGFCRGEADDLAKSEGPYF--SLTSTEQSVENLYQLSN-LGIPGVWVFHIG  264 (1289)
T ss_pred             EeccCCeEEEee-ccccc----cccccceeeeeccccccccccCcccc--cccchHHHHHHHhhhcc-cCCCCeEEEecC
Confidence            9984  998876 34443    2478999999998732       133  33566789999999998 999999999999


Q ss_pred             Cce
Q psy12377        161 ENI  163 (194)
Q Consensus       161 ~~~  163 (194)
                      +.+
T Consensus       265 s~~  267 (1289)
T KOG1214|consen  265 STS  267 (1289)
T ss_pred             Ccc
Confidence            875

>PF03782 AMOP: AMOP domain; InterPro: IPR005533 This domain may have a role in cell adhesion []

Probab=93.98  E-value=0.0039  Score=50.15  Aligned_cols=70  Identities=37%  Similarity=0.720  Sum_probs=52.9

Q ss_pred             cccCCCCCCCCCccccEEEEeecCChhHHHHHHHHHhhcCCCCcceEeccccccCCCCCCccCceeeEEEE
Q psy12377          9 NNTCSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLA   79 (194)
Q Consensus         9 ~~~~~~w~d~~~~~G~VyYre~~~~p~vL~rAt~dI~~~fp~~~fvvTW~~V~~y~~~~~~~~NTFQaVLi   79 (194)
                      ...|..|...+-.... |.+++.++|++|.+|..|+.||+|+...-..=+.++.|..++.+.+.+=+.+..
T Consensus         3 ~~~C~~W~~~~~~~~~-fl~~lp~CPCt~~Qa~~D~gRf~~~~~c~~~~~~~c~y~pGA~~Cvrs~~~~~~   72 (151)
T PF03782_consen    3 RDWCEKWLNCDEQLPN-FLRDLPPCPCTLPQARADLGRFFPDPDCDMDRDSLCTYHPGAVHCVRSALSSQS   72 (151)
T ss_pred             HHHHHHHHHcCchhhH-HHhhCCCCCCChHHhhhccCceeecccccCCCCccceecCCCceeeeccccccc
Confidence            4679999999944333 778889999999999999999999876544567788888776665555333433

It is called the AMOP domain after Adhesion associated domain in MUC4 and Other Proteins. This domain is extracellular and contains a number of cysteines that probably form disulphide bridges.

>KOG3848|consensus

Probab=80.98  E-value=2.2  Score=39.72  Aligned_cols=60  Identities=18%  Similarity=0.297  Sum_probs=39.7

Q ss_pred             cceEeccccccCCCCCCccCceeeEEEEecCCceEEEEEcCccceecccccCCCCCCCCCCcceEEEEeec
Q psy12377         52 DCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAG  122 (194)
Q Consensus        52 ~fvvTW~~V~~y~~~~~~~~NTFQaVLitdg~~SfalF~Y~~iqW~~~~~~~~~~~~g~~g~~A~aGf~~G  122 (194)
                      .|+|-|++|.--+.. ....-|||+.|--||.   ++|.|-++...-...++.+       .|..+|.+..
T Consensus       215 afvvqWdnV~Lqd~~-d~gsFTFqatL~~dGd---IVFaYkevP~~i~~Isd~n-------HPVKvGLSDA  274 (516)
T KOG3848|consen  215 AFVVQWDNVQLQDDK-DEGSFTFQATLHKDGD---IVFAYKEVPYDISNISDAN-------HPVKVGLSDA  274 (516)
T ss_pred             EEEEEeeeEEeccCC-CCCcEEEEEEeccCCc---EEEEEeecccccccccccC-------Cceeecccce
Confidence            579999999876533 2356899999999997   4566655544333223222       3677887753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00