Psyllid ID: psy12547


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
KRTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQLSTCKNPQ
ccccccccccccHHHHHHHHHHHHHHHHHcHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccEEEEEEccccHHHHHHHcEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
ccccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccHHHEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccc
krtnhwpllgspipgltIIGLYLYFILSygprfmanrkplnLRYVLIVYNFFQVGISVWLVWEAMDAAWThyswkcepvdfsnspsaMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPmvswgaakyypgghgtfiGTINSFVHVIMYTYYALAALGdqlstcknpq
krtnhwpllgspipgLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGdqlstcknpq
KRTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQLSTCKNPQ
*****WPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQL*******
KRTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQLSTCK***
KRTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQLSTCKNPQ
****HWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQLSTC****
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
ooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KRTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQLSTCKNPQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query181 2.2.26 [Sep-21-2011]
Q9JLJ5279 Elongation of very long c yes N/A 0.939 0.609 0.514 4e-46
A1L3X0281 Elongation of very long c yes N/A 0.939 0.604 0.485 2e-45
Q9BW60279 Elongation of very long c no N/A 0.939 0.609 0.502 4e-45
D4ADY9281 Elongation of very long c no N/A 0.939 0.604 0.491 5e-45
Q9D2Y9281 Elongation of very long c no N/A 0.939 0.604 0.491 7e-45
A0JNC4281 Elongation of very long c yes N/A 0.939 0.604 0.485 9e-45
Q1HRV8 358 Elongation of very long c N/A N/A 0.961 0.486 0.471 3e-41
Q3S8M4314 Elongation of very long c no N/A 0.939 0.541 0.465 1e-37
Q95K73314 Elongation of very long c N/A N/A 0.939 0.541 0.465 1e-37
Q9GZR5314 Elongation of very long c no N/A 0.939 0.541 0.459 3e-37
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1 Back     alignment and function desciption
 Score =  184 bits (466), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 88/171 (51%), Positives = 124/171 (72%), Gaps = 1/171 (0%)

Query: 2   RTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLV 61
           R   +PL+GSP+   +I+  Y+YFILS GPR MANRKP  LR  +IVYNF  V +S+++V
Sbjct: 18  RIQSYPLMGSPLLITSILLTYVYFILSLGPRIMANRKPFQLRGFMIVYNFSLVILSLYIV 77

Query: 62  WEAMDAAW-THYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQI 120
           +E + + W + Y+W+C+P+DFSNSP A+R+    +++ L+K+ EL+DTV F+LRKK  Q+
Sbjct: 78  YEFLMSGWLSTYTWRCDPIDFSNSPEALRMVRVAWLFMLSKVIELMDTVIFILRKKDGQV 137

Query: 121 TFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALG 171
           TFLH++HH+V+P   W   K  PGG G+F   INS VHV+MY YY L+ALG
Sbjct: 138 TFLHVFHHSVLPWSWWWGIKIAPGGMGSFHAMINSSVHVVMYLYYGLSALG 188




Involved in the biosynthesis of C26 fatty acids and sphingolipids. Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis. Important for sphingolipid biosynthesis.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function description
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function description
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function description
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query181
118785809 294 AGAP008780-PA [Anopheles gambiae str. PE 0.950 0.585 0.710 2e-72
389611375 312 elongase [Papilio polytes] 0.950 0.551 0.699 2e-70
156553610 357 PREDICTED: elongation of very long chain 0.961 0.487 0.725 3e-70
157130925 299 elongase, putative [Aedes aegypti] gi|10 0.955 0.578 0.683 4e-70
357614336 289 putative elongase [Danaus plexippus] 0.961 0.602 0.708 3e-69
328776411 304 PREDICTED: elongation of very long chain 0.950 0.565 0.716 1e-67
380014338 304 PREDICTED: elongation of very long chain 0.950 0.565 0.705 2e-66
340722136 304 PREDICTED: elongation of very long chain 0.950 0.565 0.705 3e-66
350416527 304 PREDICTED: elongation of very long chain 0.950 0.565 0.705 3e-66
383849792 302 PREDICTED: elongation of very long chain 0.950 0.569 0.710 2e-65
>gi|118785809|ref|XP_314908.3| AGAP008780-PA [Anopheles gambiae str. PEST] gi|116127912|gb|EAA10106.4| AGAP008780-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 123/173 (71%), Positives = 150/173 (86%), Gaps = 1/173 (0%)

Query: 2   RTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLV 61
           RTNHWPL+ SP+PGLTII  YLYF+L++GP++MANRKP  ++  L+VYNF QV +S++L 
Sbjct: 24  RTNHWPLISSPVPGLTIIASYLYFVLNFGPKYMANRKPFQMQKTLVVYNFIQVLVSIYLF 83

Query: 62  WEAMDAAW-THYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQI 120
            E +D AW  HYSW+C+PVDF+++P+AMR+A G YIYFLAKISELLDTVFF LRKK NQI
Sbjct: 84  AEGLDGAWLRHYSWRCQPVDFNDNPAAMRVARGCYIYFLAKISELLDTVFFTLRKKDNQI 143

Query: 121 TFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQ 173
           TFLH+YHHTVMPM+SWGA KYYPGGHGTFIG INSFVH++MYTYY +AA+G Q
Sbjct: 144 TFLHLYHHTVMPMISWGATKYYPGGHGTFIGVINSFVHIVMYTYYMMAAMGPQ 196




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389611375|dbj|BAM19299.1| elongase [Papilio polytes] Back     alignment and taxonomy information
>gi|156553610|ref|XP_001599914.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|157130925|ref|XP_001662066.1| elongase, putative [Aedes aegypti] gi|108881908|gb|EAT46133.1| AAEL002673-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357614336|gb|EHJ69028.1| putative elongase [Danaus plexippus] Back     alignment and taxonomy information
>gi|328776411|ref|XP_624324.3| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380014338|ref|XP_003691192.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis florea] Back     alignment and taxonomy information
>gi|340722136|ref|XP_003399465.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350416527|ref|XP_003490977.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383849792|ref|XP_003700520.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query181
FB|FBgn0038986295 CG5278 [Drosophila melanogaste 0.950 0.583 0.635 2.3e-62
FB|FBgn0038983277 CG5326 [Drosophila melanogaste 0.955 0.624 0.522 4.7e-48
ZFIN|ZDB-GENE-030131-6149289 elovl7a "ELOVL family member 7 0.939 0.588 0.532 1.2e-47
FB|FBgn0051522 365 CG31522 [Drosophila melanogast 0.950 0.471 0.482 3.3e-47
UNIPROTKB|E1C102283 ELOVL7 "Uncharacterized protei 0.939 0.600 0.491 1.1e-46
RGD|1587151279 Elovl1 "ELOVL fatty acid elong 0.939 0.609 0.508 1.8e-46
MGI|MGI:1858959279 Elovl1 "elongation of very lon 0.939 0.609 0.514 2.3e-46
UNIPROTKB|I3LQY5295 ELOVL1 "Uncharacterized protei 0.939 0.576 0.502 3e-46
ZFIN|ZDB-GENE-030131-5485282 elovl7b "ELOVL family member 7 0.939 0.602 0.479 3.8e-46
UNIPROTKB|E2RFT7288 ELOVL7 "Uncharacterized protei 0.939 0.590 0.508 4.8e-46
FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 110/173 (63%), Positives = 140/173 (80%)

Query:     2 RTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLV 61
             RTN W L+ SP+P L I+  YL+F+LS+GP+FM +RKP  L   L+VYNFFQV +SVW+V
Sbjct:    23 RTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSVWMV 82

Query:    62 WEAMDAAWTHYSWKCEPVDFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQIT 121
             +E +   W +YSW+C+PVD+S +P A R A  VY+Y+LAKI+ELLDT+FFVLRK   Q+T
Sbjct:    83 YEGV-VIWQYYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQVT 141

Query:   122 FLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALGDQL 174
             FLH+YHHTVMPM+SWG +KYYPGGHGTFIG INSFVH+IMY+YY L+A G Q+
Sbjct:   142 FLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQM 194




GO:0016021 "integral to membrane" evidence=IEA
FB|FBgn0038983 CG5326 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6149 elovl7a "ELOVL family member 7, elongation of long chain fatty acids (yeast) a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1C102 ELOVL7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1587151 Elovl1 "ELOVL fatty acid elongase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1858959 Elovl1 "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LQY5 ELOVL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFT7 ELOVL7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A0JNC4ELOV7_BOVIN2, ., 3, ., 1, ., n, 80.48530.93920.6049yesN/A
Q9JLJ5ELOV1_MOUSE2, ., 3, ., 1, ., n, 80.51460.93920.6093yesN/A
A1L3X0ELOV7_HUMAN2, ., 3, ., 1, ., n, 80.48530.93920.6049yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query181
pfam01151244 pfam01151, ELO, GNS1/SUR4 family 2e-59
PTZ00251272 PTZ00251, PTZ00251, fatty acid elongase; Provision 9e-09
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score =  185 bits (471), Expect = 2e-59
 Identities = 83/168 (49%), Positives = 106/168 (63%), Gaps = 4/168 (2%)

Query: 7   PLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMD 66
           PLL SP P + II LYL F+   GP+ M NRKP +L+ +LIV+N F V +S++  +  + 
Sbjct: 1   PLLSSPWPVILIIVLYLVFVF-LGPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGFYGLLA 59

Query: 67  AAW-THYSWKCEPVDFSNSPSAMRIAWGVYIY--FLAKISELLDTVFFVLRKKHNQITFL 123
            A      +    V +S  P A+R+    + Y  FL+K  ELLDTVF VLRKK  Q++FL
Sbjct: 60  GAGWGRGLYLALCVCYSFDPGAIRMGLVGFWYWLFLSKFLELLDTVFLVLRKKQRQLSFL 119

Query: 124 HMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHVIMYTYYALAALG 171
           H+YHH  M + SW   KY PGGH  FI  +NSFVHVIMY YY LAALG
Sbjct: 120 HVYHHATMLLYSWLGLKYGPGGHFWFIALLNSFVHVIMYFYYFLAALG 167


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|140278 PTZ00251, PTZ00251, fatty acid elongase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 181
KOG3071|consensus274 100.0
PF01151250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 100.0
PTZ00251272 fatty acid elongase; Provisional 100.0
KOG3072|consensus282 100.0
>KOG3071|consensus Back     alignment and domain information
Probab=100.00  E-value=2.9e-55  Score=369.27  Aligned_cols=175  Identities=49%  Similarity=0.789  Sum_probs=162.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHhhhhhhcCCCCCcchhhHHhHhHHHHHHHHHHHHHHHHHhh--ccccceeccC
Q psy12547          2 RTNHWPLLGSPIPGLTIIGLYLYFILSYGPRFMANRKPLNLRYVLIVYNFFQVGISVWLVWEAMDAAW--THYSWKCEPV   79 (181)
Q Consensus         2 r~~~wpl~~sp~~~~~i~~~Yl~~V~~~g~~~M~~Rkp~~Lk~~~~~yN~~l~~~S~~~~~~~~~~~~--~~~~~~C~~~   79 (181)
                      |++ ||++++|+++..++.+|+ +|.+.||++|+||||++||+++.+||++|++.|++++.+.....+  ..+++.|+++
T Consensus        21 ~v~-~~~l~s~~~~~~il~~yl-~v~~~G~~~m~nrkp~~l~~~~~vyN~~~vl~s~~i~~~~~~~~~~~~~y~l~c~~~   98 (274)
T KOG3071|consen   21 RVR-SPLLSSPWPLLSILLAYL-FVLKLGPKLMRNRKPLKLRGLSQVYNLGQVLLSAAIFLEGELWRWLKTAYNLRCQPC   98 (274)
T ss_pred             ccc-chhccCcHHHHHHHHHHH-HHHHhcHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccceEEEec
Confidence            444 999999999999999999 666799999999999999999999999999999997777666555  4799999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHhhhhHHHHHHhcCCCcceeEeeecccchhhhhhhheeeccccchHHHHHHHHHHHH
Q psy12547         80 DFSNSPSAMRIAWGVYIYFLAKISELLDTVFFVLRKKHNQITFLHMYHHTVMPMVSWGAAKYYPGGHGTFIGTINSFVHV  159 (181)
Q Consensus        80 ~~~~~~~~~~~~~~~~~f~lsK~~El~DTvf~vLrkk~~qlsFLHvyHH~~~~~~~w~~~~~~~~~~~~~~~~~Ns~VH~  159 (181)
                      +.++++..+++.+++|+||+||+.||+||+|+|||||++|+||||+|||++|+..+|..+++.+||+.++.+.+|++||+
T Consensus        99 ~~~~~~~~~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g~~~~~~~lNs~VHv  178 (274)
T KOG3071|consen   99 FPSDHEPKLRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGGHGFFAILLNSFVHV  178 (274)
T ss_pred             CCCCCCcceeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCceeeeeeehhhhHHH
Confidence            88888888899999999999999999999999999999999999999999999999999999888999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCC
Q psy12547        160 IMYTYYALAALGDQLSTCK  178 (181)
Q Consensus       160 iMY~YY~l~a~g~~~~~~~  178 (181)
                      +||+||++||+|+|+|+.+
T Consensus       179 iMY~YYflsa~G~~v~~~l  197 (274)
T KOG3071|consen  179 IMYGYYFLSAFGPRVQWYL  197 (274)
T ss_pred             HHHHHHHHHhhCcCccccc
Confidence            9999999999999998754



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00