Psyllid ID: psy1330

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
MSGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL
cccHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEcccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHcEEEEccccccccccccEEEccccccccccHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHc
cccHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccEcccccccEEEEEcccccccHHHHHHHHHHHccccEEEEEcccEccEccHHHHHcccccccccccHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEEEEEEccccccccHHHHHHHHHHH
MSGIIELLRKkrsgnelspgeiAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVdsgetlswrpedivvdkhstggvgdkvsipLVPALAacglkvpmvsgrgldfsggtldklesipgyqvncstADLKAKLSEVGCfivgankqlspgdqilYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL
msgiiellrkkrsgnelspgeiakfvnltVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKhstggvgdkvsIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVgankqlspgdqILYRVRDVTATVDNLSLCSasilskkvaegTKYLVIdvkvgeasfFKTYEKAKEMAELL
MSGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL
*********************IAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTY**********
**GIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL
MSGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEK********
**GIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAEL*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query221 2.2.26 [Sep-21-2011]
P19971 482 Thymidine phosphorylase O yes N/A 0.981 0.450 0.561 9e-62
Q5FVR2 476 Thymidine phosphorylase O yes N/A 0.977 0.453 0.559 1e-61
Q99N42 471 Thymidine phosphorylase O yes N/A 0.977 0.458 0.555 3e-61
Q92T50 440 Thymidine phosphorylase O yes N/A 0.963 0.484 0.509 2e-56
A6UET3 438 Thymidine phosphorylase O yes N/A 0.904 0.456 0.536 6e-56
C3MBH0 438 Thymidine phosphorylase O yes N/A 0.963 0.486 0.504 3e-55
A0KCQ9 438 Thymidine phosphorylase O yes N/A 0.968 0.488 0.483 2e-53
Q1BV59 438 Thymidine phosphorylase O yes N/A 0.968 0.488 0.483 2e-53
Q8UJ08 438 Thymidine phosphorylase O yes N/A 0.968 0.488 0.515 2e-53
B4EPB7 438 Thymidine phosphorylase O yes N/A 0.968 0.488 0.483 3e-53
>sp|P19971|TYPH_HUMAN Thymidine phosphorylase OS=Homo sapiens GN=TYMP PE=1 SV=2 Back     alignment and function desciption
 Score =  236 bits (602), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 156/221 (70%), Gaps = 4/221 (1%)

Query: 4   IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
           + EL+R KR G  LS  +I  FV   V G+A+ +QIGAMLMA+ + G+  EET  LT+++
Sbjct: 36  LPELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQAL 95

Query: 64  VDSGETLSWRPE---DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGT 120
             SG+ L W PE     +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGRGL  +GGT
Sbjct: 96  AQSGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGT 154

Query: 121 LDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLC 180
           LDKLESIPG+ V  S   ++  L + GC IVG ++QL P D ILY  RDVTATVD+L L 
Sbjct: 155 LDKLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLI 214

Query: 181 SASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
           +ASILSKK+ EG   LV+DVK G A+ F   E+A+E+A+ L
Sbjct: 215 TASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTL 255
Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 4
>sp|Q5FVR2|TYPH_RAT Thymidine phosphorylase OS=Rattus norvegicus GN=Tymp PE=2 SV=1 Back     alignment and function description
>sp|Q99N42|TYPH_MOUSE Thymidine phosphorylase OS=Mus musculus GN=Tymp PE=2 SV=1 Back     alignment and function description
>sp|Q92T50|TYPH_RHIME Thymidine phosphorylase OS=Rhizobium meliloti (strain 1021) GN=deoA PE=3 SV=1 Back     alignment and function description
>sp|A6UET3|TYPH_SINMW Thymidine phosphorylase OS=Sinorhizobium medicae (strain WSM419) GN=deoA PE=3 SV=1 Back     alignment and function description
>sp|C3MBH0|TYPH_RHISN Thymidine phosphorylase OS=Rhizobium sp. (strain NGR234) GN=deoA PE=3 SV=1 Back     alignment and function description
>sp|A0KCQ9|TYPH_BURCH Thymidine phosphorylase OS=Burkholderia cenocepacia (strain HI2424) GN=deoA PE=3 SV=1 Back     alignment and function description
>sp|Q1BV59|TYPH_BURCA Thymidine phosphorylase OS=Burkholderia cenocepacia (strain AU 1054) GN=deoA PE=3 SV=1 Back     alignment and function description
>sp|Q8UJ08|TYPH_AGRT5 Thymidine phosphorylase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=deoA PE=3 SV=1 Back     alignment and function description
>sp|B4EPB7|TYPH_BURCJ Thymidine phosphorylase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=deoA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query221
34330119 456 spermatogonial stem-cell renewal factor 0.977 0.473 0.559 2e-62
327287908 690 PREDICTED: thymidine phosphorylase-like 0.981 0.314 0.556 2e-62
351700555 484 Thymidine phosphorylase [Heterocephalus 0.981 0.448 0.570 3e-62
242015750 445 Thymidine phosphorylase precursor, putat 0.986 0.489 0.568 9e-62
291415385 481 PREDICTED: endothelial cell growth facto 0.981 0.451 0.574 1e-61
260800029 456 hypothetical protein BRAFLDRAFT_244533 [ 0.968 0.469 0.544 1e-61
444707850 658 Thymidine phosphorylase [Tupaia chinensi 0.981 0.329 0.579 2e-61
348551628 484 PREDICTED: thymidine phosphorylase-like 0.981 0.448 0.570 2e-61
402884686 481 PREDICTED: thymidine phosphorylase isofo 0.981 0.451 0.570 2e-61
213511662 453 Thymidine phosphorylase [Salmo salar] gi 0.968 0.472 0.569 2e-61
>gi|34330119|dbj|BAC82441.1| spermatogonial stem-cell renewal factor [Anguilla japonica] Back     alignment and taxonomy information
 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/218 (55%), Positives = 158/218 (72%), Gaps = 2/218 (0%)

Query: 6   ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
           EL+RKKR G + +P EI  FV      T +++QIGAMLMA++  G+  EET+ALT+ M+ 
Sbjct: 13  ELIRKKRDGEQFTPEEIRAFVLAVKNSTIQEAQIGAMLMAIWQKGMVAEETLALTREMML 72

Query: 66  SGETLSWRPE--DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
           SGE L+W  E   +V+DKHSTGGVGDKVS+PL PALAACG KVPM+SGR L  +GGTLDK
Sbjct: 73  SGEVLTWPAEWAGLVMDKHSTGGVGDKVSLPLAPALAACGCKVPMISGRALAHTGGTLDK 132

Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
           LESIPG+ ++ S   +K  L EVGC IVG  + L P D++LY +RD TATVD++ L +AS
Sbjct: 133 LESIPGFSIHQSVGQMKKILEEVGCCIVGQTENLVPADKVLYAIRDATATVDSMPLVTAS 192

Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
           I+SKK AE    L++DVK G+A+ FK    A+EMA+ L
Sbjct: 193 IISKKGAESLCALILDVKYGKAAVFKDIASAREMAQSL 230

Source: Anguilla japonica

Species: Anguilla japonica

Genus: Anguilla

Family: Anguillidae

Order: Anguilliformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota
>gi|327287908|ref|XP_003228670.1| PREDICTED: thymidine phosphorylase-like [Anolis carolinensis] Back     alignment and taxonomy information
>gi|351700555|gb|EHB03474.1| Thymidine phosphorylase [Heterocephalus glaber] Back     alignment and taxonomy information
>gi|242015750|ref|XP_002428510.1| Thymidine phosphorylase precursor, putative [Pediculus humanus corporis] gi|212513144|gb|EEB15772.1| Thymidine phosphorylase precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|291415385|ref|XP_002723933.1| PREDICTED: endothelial cell growth factor 1 (platelet-derived)-like [Oryctolagus cuniculus] Back     alignment and taxonomy information
>gi|260800029|ref|XP_002594939.1| hypothetical protein BRAFLDRAFT_244533 [Branchiostoma floridae] gi|229280177|gb|EEN50950.1| hypothetical protein BRAFLDRAFT_244533 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|444707850|gb|ELW49007.1| Thymidine phosphorylase [Tupaia chinensis] Back     alignment and taxonomy information
>gi|348551628|ref|XP_003461632.1| PREDICTED: thymidine phosphorylase-like [Cavia porcellus] Back     alignment and taxonomy information
>gi|402884686|ref|XP_003905806.1| PREDICTED: thymidine phosphorylase isoform 1 [Papio anubis] gi|402884688|ref|XP_003905807.1| PREDICTED: thymidine phosphorylase isoform 2 [Papio anubis] Back     alignment and taxonomy information
>gi|213511662|ref|NP_001133751.1| Thymidine phosphorylase [Salmo salar] gi|209155212|gb|ACI33838.1| Thymidine phosphorylase precursor [Salmo salar] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query221
UNIPROTKB|P19971 482 TYMP "Thymidine phosphorylase" 0.972 0.446 0.566 2.2e-57
RGD|1305756 476 Tymp "thymidine phosphorylase" 0.977 0.453 0.559 2.2e-57
UNIPROTKB|Q5FVR2 476 Tymp "Thymidine phosphorylase" 0.977 0.453 0.559 2.2e-57
MGI|MGI:1920212 471 Tymp "thymidine phosphorylase" 0.977 0.458 0.555 9.6e-57
UNIPROTKB|Q9KPL8 448 deoA "Thymidine phosphorylase" 0.963 0.475 0.490 1.8e-48
TIGR_CMR|VC_2349 448 VC_2349 "thymidine phosphoryla 0.963 0.475 0.490 1.8e-48
UNIPROTKB|P07650 440 deoA [Escherichia coli K-12 (t 0.977 0.490 0.470 2.3e-48
TIGR_CMR|CPS_1970 438 CPS_1970 "thymidine phosphoryl 0.968 0.488 0.497 2.9e-48
TIGR_CMR|SO_1218 443 SO_1218 "thymidine phosphoryla 0.963 0.480 0.481 5.4e-47
UNIPROTKB|Q3ABU8 442 pdp "Pyrimidine-nucleoside pho 0.977 0.488 0.437 1.7e-43
UNIPROTKB|P19971 TYMP "Thymidine phosphorylase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 124/219 (56%), Positives = 155/219 (70%)

Query:     6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
             EL+R KR G  LS  +I  FV   V G+A+ +QIGAMLMA+ + G+  EET  LT+++  
Sbjct:    38 ELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQ 97

Query:    66 SGETLSWRPE---DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
             SG+ L W PE     +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGRGL  +GGTLD
Sbjct:    98 SGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLD 156

Query:   123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
             KLESIPG+ V  S   ++  L + GC IVG ++QL P D ILY  RDVTATVD+L L +A
Sbjct:   157 KLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLITA 216

Query:   183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
             SILSKK+ EG   LV+DVK G A+ F   E+A+E+A+ L
Sbjct:   217 SILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTL 255
GO:0004645 "phosphorylase activity" evidence=IEA
GO:0016154 "pyrimidine-nucleoside phosphorylase activity" evidence=IEA
GO:0001525 "angiogenesis" evidence=IEA
GO:0006935 "chemotaxis" evidence=IEA
GO:0008083 "growth factor activity" evidence=IEA
GO:0030154 "cell differentiation" evidence=IEA
GO:0009032 "thymidine phosphorylase activity" evidence=IEA
GO:0000002 "mitochondrial genome maintenance" evidence=TAS
GO:0005161 "platelet-derived growth factor receptor binding" evidence=TAS
GO:0006220 "pyrimidine nucleotide metabolic process" evidence=TAS
GO:0006260 "DNA replication" evidence=TAS
GO:0005829 "cytosol" evidence=TAS
GO:0006206 "pyrimidine nucleobase metabolic process" evidence=TAS
GO:0016763 "transferase activity, transferring pentosyl groups" evidence=EXP
GO:0043097 "pyrimidine nucleoside salvage" evidence=TAS
GO:0044281 "small molecule metabolic process" evidence=TAS
GO:0046135 "pyrimidine nucleoside catabolic process" evidence=TAS
GO:0055086 "nucleobase-containing small molecule metabolic process" evidence=TAS
RGD|1305756 Tymp "thymidine phosphorylase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5FVR2 Tymp "Thymidine phosphorylase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1920212 Tymp "thymidine phosphorylase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPL8 deoA "Thymidine phosphorylase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2349 VC_2349 "thymidine phosphorylase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P07650 deoA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1970 CPS_1970 "thymidine phosphorylase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1218 SO_1218 "thymidine phosphorylase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ABU8 pdp "Pyrimidine-nucleoside phosphorylase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P19971TYPH_HUMAN2, ., 4, ., 2, ., 40.56100.98190.4502yesN/A
Q8UJ08TYPH_AGRT52, ., 4, ., 2, ., 40.51590.96830.4885yesN/A
Q5FVR2TYPH_RAT2, ., 4, ., 2, ., 40.55960.97730.4537yesN/A
Q92T50TYPH_RHIME2, ., 4, ., 2, ., 40.50900.96380.4840yesN/A
C3MBH0TYPH_RHISN2, ., 4, ., 2, ., 40.50450.96380.4863yesN/A
A6UET3TYPH_SINMW2, ., 4, ., 2, ., 40.53620.90490.4566yesN/A
Q99N42TYPH_MOUSE2, ., 4, ., 2, ., 40.55500.97730.4585yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.20.691
4th Layer2.4.2.18LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
PRK05820 440 PRK05820, deoA, thymidine phosphorylase; Reviewed 1e-105
TIGR02644 405 TIGR02644, Y_phosphoryl, pyrimidine-nucleoside pho 1e-96
COG0213 435 COG0213, DeoA, Thymidine phosphorylase [Nucleotide 2e-90
TIGR02643 437 TIGR02643, T_phosphoryl, thymidine phosphorylase 2e-84
PRK06078 434 PRK06078, PRK06078, pyrimidine-nucleoside phosphor 5e-65
PRK04350 490 PRK04350, PRK04350, thymidine phosphorylase; Provi 3e-40
TIGR02645 493 TIGR02645, ARCH_P_rylase, putative thymidine phosp 5e-40
TIGR03327 500 TIGR03327, AMP_phos, AMP phosphorylase 5e-37
pfam00591 254 pfam00591, Glycos_transf_3, Glycosyl transferase f 1e-25
pfam0288566 pfam02885, Glycos_trans_3N, Glycosyl transferase f 7e-18
TIGR01245 330 TIGR01245, trpD, anthranilate phosphoribosyltransf 3e-12
COG0547 338 COG0547, TrpD, Anthranilate phosphoribosyltransfer 1e-11
PRK14607 534 PRK14607, PRK14607, bifunctional glutamine amidotr 2e-09
PRK00188 339 PRK00188, trpD, anthranilate phosphoribosyltransfe 3e-07
PRK09522 531 PRK09522, PRK09522, bifunctional glutamine amidotr 1e-04
>gnl|CDD|180276 PRK05820, deoA, thymidine phosphorylase; Reviewed Back     alignment and domain information 
 Score =  309 bits (794), Expect = e-105
 Identities = 117/221 (52%), Positives = 153/221 (69%), Gaps = 3/221 (1%)

Query: 4   IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
             E++RKKR G  LS  EI  F++    GT  D QI A+ MA+F NG+T  E +ALT +M
Sbjct: 4   AQEIIRKKRDGGALSDEEIDWFIDGYTDGTVSDGQIAALAMAIFFNGMTRPERVALTLAM 63

Query: 64  VDSGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGT 120
            DSGE L W   ++   +VDKHSTGGVGDK+S+ L P +AACG  VPM+SGRGL  +GGT
Sbjct: 64  RDSGEVLDWSSLNLNGPIVDKHSTGGVGDKISLMLAPMVAACGGYVPMISGRGLGHTGGT 123

Query: 121 LDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLC 180
           LDKLE+IPGY+   S    +  L +VG  I+G    L+P D+ LY +RDVTATV+++ L 
Sbjct: 124 LDKLEAIPGYRAFPSNDRFREILKDVGVAIIGQTSDLAPADKRLYALRDVTATVESIPLI 183

Query: 181 SASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
           +ASILSKK+AEG   LV+DVKVG  +F KTYE+A+E+A  +
Sbjct: 184 TASILSKKLAEGLDALVLDVKVGSGAFMKTYEEARELARSM 224

Length = 440
>gnl|CDD|233961 TIGR02644, Y_phosphoryl, pyrimidine-nucleoside phosphorylase Back     alignment and domain information
>gnl|CDD|223291 COG0213, DeoA, Thymidine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|131691 TIGR02643, T_phosphoryl, thymidine phosphorylase Back     alignment and domain information
>gnl|CDD|180387 PRK06078, PRK06078, pyrimidine-nucleoside phosphorylase; Reviewed Back     alignment and domain information
>gnl|CDD|235289 PRK04350, PRK04350, thymidine phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|233962 TIGR02645, ARCH_P_rylase, putative thymidine phosphorylase Back     alignment and domain information
>gnl|CDD|132370 TIGR03327, AMP_phos, AMP phosphorylase Back     alignment and domain information
>gnl|CDD|216013 pfam00591, Glycos_transf_3, Glycosyl transferase family, a/b domain Back     alignment and domain information
>gnl|CDD|145834 pfam02885, Glycos_trans_3N, Glycosyl transferase family, helical bundle domain Back     alignment and domain information
>gnl|CDD|233329 TIGR01245, trpD, anthranilate phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|223621 COG0547, TrpD, Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|237764 PRK14607, PRK14607, bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|234682 PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181927 PRK09522, PRK09522, bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 221
PRK05820 440 deoA thymidine phosphorylase; Reviewed 100.0
TIGR02644 405 Y_phosphoryl pyrimidine-nucleoside phosphorylase. 100.0
TIGR02643 437 T_phosphoryl thymidine phosphorylase. Thymidine ph 100.0
PRK06078 434 pyrimidine-nucleoside phosphorylase; Reviewed 100.0
TIGR02645 493 ARCH_P_rylase putative thymidine phosphorylase. Me 100.0
PRK04350 490 thymidine phosphorylase; Provisional 100.0
TIGR03327 500 AMP_phos AMP phosphorylase. This enzyme family is 100.0
COG0213 435 DeoA Thymidine phosphorylase [Nucleotide transport 100.0
COG0547 338 TrpD Anthranilate phosphoribosyltransferase [Amino 100.0
PRK08136317 glycosyl transferase family protein; Provisional 100.0
PLN02641 343 anthranilate phosphoribosyltransferase 100.0
PRK07394 342 hypothetical protein; Provisional 100.0
PRK09071 323 hypothetical protein; Validated 100.0
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 100.0
PRK00188 339 trpD anthranilate phosphoribosyltransferase; Provi 100.0
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 100.0
TIGR01245 330 trpD anthranilate phosphoribosyltransferase. In ma 100.0
PF00591252 Glycos_transf_3: Glycosyl transferase family, a/b 100.0
KOG1438|consensus 373 99.96
PF0288566 Glycos_trans_3N: Glycosyl transferase family, heli 99.82
PRK10416318 signal recognition particle-docking protein FtsY; 92.96
PF0428271 DUF438: Family of unknown function (DUF438); Inter 90.11
TIGR03499282 FlhF flagellar biosynthetic protein FlhF. 89.05
PRK05703424 flhF flagellar biosynthesis regulator FlhF; Valida 86.76
PF1182996 DUF3349: Protein of unknown function (DUF3349); In 83.66
PF04227293 Indigoidine_A: Indigoidine synthase A like protein 83.51
PRK10867 433 signal recognition particle protein; Provisional 82.89
PRK14723 767 flhF flagellar biosynthesis regulator FlhF; Provis 82.27
>PRK05820 deoA thymidine phosphorylase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=2.1e-71  Score=514.13  Aligned_cols=221  Identities=53%  Similarity=0.824  Sum_probs=214.3

Q ss_pred             CccHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHHhhCCCCCCCCC---CC
Q psy1330           1 MSGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPE---DI   77 (221)
Q Consensus         1 m~~~~~~i~k~~~g~~Lt~eEa~~~~~~il~g~~~~~Qi~AfL~alr~kget~eEl~g~~~am~~~~~~~~~~~~---~~   77 (221)
                      |++|+++|+++.+|++||+||++++|+.|++|+++|+|++||||++|+||||+||+++|++||++++.+++|+..   ..
T Consensus         1 ~m~~~~~I~kk~~g~~Lt~eE~~~~~~~i~~G~~~d~QiaAfLmAl~~kG~t~eEi~~lt~Am~~sg~~i~~~~~d~~~~   80 (440)
T PRK05820          1 MFLAQEIIRKKRDGGALSDEEIDWFIDGYTDGTVSDGQIAALAMAIFFNGMTRPERVALTLAMRDSGEVLDWSSLNLNGP   80 (440)
T ss_pred             CCCHHHHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCCccccCCCC
Confidence            678999999999999999999999999999999999999999999999999999999999999999999988631   12


Q ss_pred             ceeeccCCCCCCcchhhHHHHHHhCCCcEEeecCCCCCCCCcHHHHHhcCCCCCCCCCHHHHHHHHHhhCceeecCCCcC
Q psy1330          78 VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQL  157 (221)
Q Consensus        78 ~vD~~gtGGdg~niSt~~a~vlAa~Gv~V~kHG~r~~ts~~GsaDvLe~L~Gi~~~~s~~~~~~~l~~~g~~fl~a~~~~  157 (221)
                      ++|+|||||||+|+||++++++|++|++|+|||||+++|++||+|+||+|||++++++++++.+++++.|++|++++.+|
T Consensus        81 ~vDkhgTGGdG~niS~~~a~ivAa~Gv~VaKhg~R~lss~~GTaD~LE~LpG~~v~ls~e~~~~~l~~~G~~~~~~~~~l  160 (440)
T PRK05820         81 IVDKHSTGGVGDKISLMLAPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGYRAFPSNDRFREILKDVGVAIIGQTSDL  160 (440)
T ss_pred             eEEEcCCCCCCccHHHHHHHHHHhCCCCEEeeCCCCCCCcccHHHHHHhCCCCCCCCCHHHHHHHHHHcCeEEEcCchhc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999997789


Q ss_pred             ChhhhhhHHHhhhhCCCCCchhHHHHhhhhhhhcCCCeEEEeeecCCCCCCCCHHHHHHHHHhC
Q psy1330         158 SPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL  221 (221)
Q Consensus       158 ~P~~~~l~~lR~~lgTi~~~~l~~asilskk~~~g~~~~v~dv~~g~~a~~~~~~~a~~la~~~  221 (221)
                      ||+|++++++|++++|++|+|||++||||||+|+|+||+|||||||+||||||+++|++||+.|
T Consensus       161 ~PAdk~l~~lRdvt~tvds~pli~aSImSKK~A~G~~~lvlDVk~G~gAfmkt~~~A~~La~~m  224 (440)
T PRK05820        161 APADKRLYALRDVTATVESIPLITASILSKKLAEGLDALVLDVKVGSGAFMKTYEEARELARSM  224 (440)
T ss_pred             ChHHHHHHHHhcccCCCChHHHHHHHHHHHHHHcCCCeEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999976

>TIGR02644 Y_phosphoryl pyrimidine-nucleoside phosphorylase Back     alignment and domain information
>TIGR02643 T_phosphoryl thymidine phosphorylase Back     alignment and domain information
>PRK06078 pyrimidine-nucleoside phosphorylase; Reviewed Back     alignment and domain information
>TIGR02645 ARCH_P_rylase putative thymidine phosphorylase Back     alignment and domain information
>PRK04350 thymidine phosphorylase; Provisional Back     alignment and domain information
>TIGR03327 AMP_phos AMP phosphorylase Back     alignment and domain information
>COG0213 DeoA Thymidine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08136 glycosyl transferase family protein; Provisional Back     alignment and domain information
>PLN02641 anthranilate phosphoribosyltransferase Back     alignment and domain information
>PRK07394 hypothetical protein; Provisional Back     alignment and domain information
>PRK09071 hypothetical protein; Validated Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK00188 trpD anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01245 trpD anthranilate phosphoribosyltransferase Back     alignment and domain information
>PF00591 Glycos_transf_3: Glycosyl transferase family, a/b domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR000312 The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2 Back     alignment and domain information
>KOG1438|consensus Back     alignment and domain information
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10416 signal recognition particle-docking protein FtsY; Provisional Back     alignment and domain information
>PF04282 DUF438: Family of unknown function (DUF438); InterPro: IPR007380 This is a a group of uncharacterised proteins Back     alignment and domain information
>TIGR03499 FlhF flagellar biosynthetic protein FlhF Back     alignment and domain information
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated Back     alignment and domain information
>PF11829 DUF3349: Protein of unknown function (DUF3349); InterPro: IPR021784 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF04227 Indigoidine_A: Indigoidine synthase A like protein; InterPro: IPR007342 Members of this entry catalyze the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil Back     alignment and domain information
>PRK10867 signal recognition particle protein; Provisional Back     alignment and domain information
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
2wk5_A 482 Structural Features Of Native Human Thymidine Phosp 7e-63
1uou_A 474 Crystal Structure Of Human Thymidine Phosphorylase 8e-63
2j0f_A 482 Structural Basis For Non-Competitive Product Inhibi 2e-62
1azy_A 440 Structural And Theoretical Studies Suggest Domain M 9e-53
1brw_B 433 The Crystal Structure Of Pyrimidine Nucleoside Phos 2e-46
2dsj_A 423 Crystal Structure Of Project Id Tt0128 From Thermus 2e-43
3h5q_A 436 Crystal Structure Of A Putative Pyrimidine-Nucleosi 9e-40
>pdb|2WK5|A Chain A, Structural Features Of Native Human Thymidine Phosphorylase And In Complex With 5-Iodouracil Length = 482 Back     alignment and structure 
Iteration: 1

 Score =  236 bits (602), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 156/221 (70%), Gaps = 4/221 (1%)
Query: 4   IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
           + EL+R KR G  LS  +I  FV   V G+A+ +QIGAMLMA+ + G+  EET  LT+++
Sbjct: 36  LPELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQAL 95
Query: 64  VDSGETLSWRPE---DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGT 120
             SG+ L W PE     +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGRGL  +GGT
Sbjct: 96  AQSGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGT 154
Query: 121 LDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLC 180
           LDKLESIPG+ V  S   ++  L + GC IVG ++QL P D ILY  RDVTATVD+L L 
Sbjct: 155 LDKLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLI 214
Query: 181 SASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
           +ASILSKK+ EG   LV+DVK G A+ F   E+A+E+A+ L
Sbjct: 215 TASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTL 255
>pdb|1UOU|A Chain A, Crystal Structure Of Human Thymidine Phosphorylase In Complex With A Small Molecule Inhibitor Length = 474 Back     alignment and structure
>pdb|2J0F|A Chain A, Structural Basis For Non-Competitive Product Inhibition In Human Thymidine Phosphorylase: Implication For Drug Design Length = 482 Back     alignment and structure
>pdb|1AZY|A Chain A, Structural And Theoretical Studies Suggest Domain Movement Produces An Active Conformation Of Thymidine Phosphorylase Length = 440 Back     alignment and structure
>pdb|1BRW|B Chain B, The Crystal Structure Of Pyrimidine Nucleoside Phosphorylase In A Closed Conformation Length = 433 Back     alignment and structure
>pdb|2DSJ|A Chain A, Crystal Structure Of Project Id Tt0128 From Thermus Thermophilus Hb8 Length = 423 Back     alignment and structure
>pdb|3H5Q|A Chain A, Crystal Structure Of A Putative Pyrimidine-Nucleoside Phosphorylase From Staphylococcus Aureus Length = 436 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
2dsj_A 423 Pyrimidine-nucleoside (thymidine) phosphorylase; p 1e-102
1brw_A 433 PYNP, protein (pyrimidine nucleoside phosphorylase 1e-101
3h5q_A 436 PYNP, pyrimidine-nucleoside phosphorylase; structu 1e-101
2tpt_A 440 Thymidine phosphorylase; transferase, salvage path 1e-100
1uou_A 474 Thymidine phosphorylase; transferase, glycosyltran 1e-99
1khd_A 345 Anthranilate phosphoribosyltransferase; type 3 PRT 2e-09
2elc_A 329 Trp D, anthranilate phosphoribosyltransferase; str 8e-09
3qr9_A 377 Anthranilate phosphoribosyltransferase; anthranili 1e-07
1vqu_A 374 Anthranilate phosphoribosyltransferase 2; 17130499 3e-07
1o17_A 345 Anthranilate PRT, anthranilate phosphoribosyltrans 9e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus} Length = 423 Back     alignment and structure
 Score =  300 bits (770), Expect = e-102
 Identities = 92/218 (42%), Positives = 137/218 (62%)

Query: 4   IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
            +  +R+KR G +    ++  F+   +     D Q+ A LMA F+ GL  EET+ LT++M
Sbjct: 3   PVAFIREKREGKKHRREDLEAFLLGYLRDEVPDYQVSAWLMAAFLRGLDPEETLWLTETM 62

Query: 64  VDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
             SG+ L        VDKHS+GGVGDKVS+ + P LAA G     +SGRGL  +GGT+DK
Sbjct: 63  ARSGKVLDLSGLPHPVDKHSSGGVGDKVSLVVGPILAASGCTFAKMSGRGLAHTGGTIDK 122

Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
           LES+PG++   + A+   +   VG  I   +  L+P D  LY +RDVTATV+++ L ++S
Sbjct: 123 LESVPGWRGEMTEAEFLERARRVGLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASS 182

Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
           I+SKK+A G + +V+DVKVG  +F KT E+A+ +A+ +
Sbjct: 183 IMSKKLAAGARSIVLDVKVGRGAFMKTLEEARLLAKTM 220
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 Length = 433 Back     alignment and structure
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus} Length = 436 Back     alignment and structure
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A Length = 440 Back     alignment and structure
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A Length = 474 Back     alignment and structure
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A Length = 345 Back     alignment and structure
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A Length = 329 Back     alignment and structure
>3qr9_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, magnesium binding, phosphoribosyl pyrophosphate transferase; 1.87A {Mycobacterium tuberculosis} PDB: 1zvw_A* 2bpq_A Length = 377 Back     alignment and structure
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} Length = 374 Back     alignment and structure
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* Length = 345 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query221
3h5q_A 436 PYNP, pyrimidine-nucleoside phosphorylase; structu 100.0
2dsj_A 423 Pyrimidine-nucleoside (thymidine) phosphorylase; p 100.0
2tpt_A 440 Thymidine phosphorylase; transferase, salvage path 100.0
1brw_A 433 PYNP, protein (pyrimidine nucleoside phosphorylase 100.0
1uou_A 474 Thymidine phosphorylase; transferase, glycosyltran 100.0
1khd_A 345 Anthranilate phosphoribosyltransferase; type 3 PRT 100.0
1o17_A 345 Anthranilate PRT, anthranilate phosphoribosyltrans 100.0
2elc_A329 Trp D, anthranilate phosphoribosyltransferase; str 100.0
3r88_A 377 Anthranilate phosphoribosyltransferase; anthranili 100.0
1vqu_A 374 Anthranilate phosphoribosyltransferase 2; 17130499 100.0
4hkm_A 346 Anthranilate phosphoribosyltransferase; structural 100.0
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 92.29
3ol3_A107 Putative uncharacterized protein; tuberculosis, RV 85.47
1j8m_F297 SRP54, signal recognition 54 kDa protein; signalin 84.72
2lky_A112 Uncharacterized protein; infectious disease, tuber 82.52
2kvc_A103 Putative uncharacterized protein; structural genom 80.92
2m0n_A112 Putative uncharacterized protein; tuberculosis, st 80.8
4gim_A335 Pseudouridine-5'-phosphate glycosidase; alpha-beta 80.35
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus} Back     alignment and structure
Probab=100.00  E-value=1.5e-69  Score=501.64  Aligned_cols=219  Identities=40%  Similarity=0.677  Sum_probs=211.8

Q ss_pred             ccHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHHhhCCCCCCCCCC-Ccee
Q psy1330           2 SGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPED-IVVD   80 (221)
Q Consensus         2 ~~~~~~i~k~~~g~~Lt~eEa~~~~~~il~g~~~~~Qi~AfL~alr~kget~eEl~g~~~am~~~~~~~~~~~~~-~~vD   80 (221)
                      ++|+++|+|+.+|++||+||++++|+.|++|+++|+|+|||||++|+||||.||+++|++||++++.+++|+..+ .++|
T Consensus         4 m~~~~~I~kl~~g~~Lt~eEa~~~~~~i~~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~~~~~~~vD   83 (436)
T 3h5q_A            4 MRMIDIIEKKRDGHTLTTEEINFFIGGYVKGDIPDYQASSLAMAIYFQDMNDDERVALTMAMVNSGDMIDLSDIKGVKVD   83 (436)
T ss_dssp             HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCTTSCSCCEE
T ss_pred             CCHHHHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCccccCCCcee
Confidence            468999999999999999999999999999999999999999999999999999999999999999999987422 3899


Q ss_pred             eccCCCCCCcchhhHHHHHHhCCCcEEeecCCCCCCCCcHHHHHhcCCCCCCCCCHHHHHHHHHhhCceeec-CCCcCCh
Q psy1330          81 KHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVG-ANKQLSP  159 (221)
Q Consensus        81 ~~gtGGdg~niSt~~a~vlAa~Gv~V~kHG~r~~ts~~GsaDvLe~L~Gi~~~~s~~~~~~~l~~~g~~fl~-a~~~~~P  159 (221)
                      ||||||||+|+||++++++|++|+||+|||||++||++||+|+||+|||++++++++++.+++++.|++|++ ++ +|||
T Consensus        84 ~~gTGGdG~~tSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaLpGi~~~ls~e~~~~~l~~~g~~fl~~a~-~~~P  162 (436)
T 3h5q_A           84 KHSTGGVGDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENKVAVVGQSG-NLTP  162 (436)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHTTCCEEEECCCCSSSSCCHHHHHTTSTTCCCCCCHHHHHHHHHHHSEEEECCCS-SSCH
T ss_pred             ecCCCCCCCChHHHHHHHHHhCCCCEEeECCCCCCCcccHHHHHHhCcCCCCCCCHHHHHHHHHHcCCEEEcccc-ccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998 57 9999


Q ss_pred             hhhhhHHHhhhhCCCCCchhHHHHhhhhhhhcCCCeEEEeeecCCCCCCCCHHHHHHHHHhC
Q psy1330         160 GDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL  221 (221)
Q Consensus       160 ~~~~l~~lR~~lgTi~~~~l~~asilskk~~~g~~~~v~dv~~g~~a~~~~~~~a~~la~~~  221 (221)
                      +|++++++|++++||||+||+++||||||+++|++++|||||+|+||||++.++|++||+.|
T Consensus       163 a~~~l~~lR~~~~TvfniPLinaSimSKKlpag~~~~vlgV~~G~gaf~~~~~~a~~lA~~l  224 (436)
T 3h5q_A          163 ADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEALAHAM  224 (436)
T ss_dssp             HHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHTTCSEEEEEEEESTTSSBCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCcCChhhhccchhccccccCCCeEEEeeecCccccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999864
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A Back     alignment and structure
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 Back     alignment and structure
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A Back     alignment and structure
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A Back     alignment and structure
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* Back     alignment and structure
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A Back     alignment and structure
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A Back     alignment and structure
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} Back     alignment and structure
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV} Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A Back     alignment and structure
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F Back     alignment and structure
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str} Back     alignment and structure
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis} Back     alignment and structure
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus} Back     alignment and structure
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 221
d1uoua2 273 c.27.1.1 (A:101-373) Thymidine phosphorylase {Huma 6e-38
d2tpta2 265 c.27.1.1 (A:71-335) Thymidine phosphorylase {Esche 2e-36
d1brwa2 260 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphor 7e-34
d1brwa170 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphoryl 4e-20
d2tpta170 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escheri 1e-18
d1uoua168 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human 2e-18
d1khda2 264 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltra 5e-18
d1o17a170 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltrans 3e-16
d1khda169 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltran 1e-15
d2elca2 264 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltra 4e-15
d2elca152 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltrans 2e-07
>d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
domain: Thymidine phosphorylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 6e-38
 Identities = 91/152 (59%), Positives = 110/152 (72%), Gaps = 2/152 (1%)

Query: 70  LSW--RPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESI 127
           L W       +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGRGL  +GGTLDKLESI
Sbjct: 2   LEWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESI 61

Query: 128 PGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSK 187
           PG+ V  S   ++  L + GC IVG ++QL P D ILY  RDVTATVD+L L +ASILSK
Sbjct: 62  PGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSK 121

Query: 188 KVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
           K+ EG   LV+DVK G A+ F   E+A+E+A+
Sbjct: 122 KLVEGLSALVVDVKFGGAAVFPNQEQARELAK 153
>d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Length = 265 Back     information, alignment and structure
>d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 260 Back     information, alignment and structure
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 70 Back     information, alignment and structure
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Length = 70 Back     information, alignment and structure
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 264 Back     information, alignment and structure
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 70 Back     information, alignment and structure
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 69 Back     information, alignment and structure
>d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 264 Back     information, alignment and structure
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 52 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query221
d1brwa2 260 Pyrimidine nucleoside phosphorylase {Bacillus stea 100.0
d2tpta2 265 Thymidine phosphorylase {Escherichia coli [TaxId: 100.0
d1uoua2 273 Thymidine phosphorylase {Human (Homo sapiens) [Tax 100.0
d1o17a2 273 Anthranilate phosphoribosyltransferase (TrpD) {Arc 100.0
d2elca2 264 Anthranilate phosphoribosyltransferase (TrpD) {The 99.98
d1khda2 264 Anthranilate phosphoribosyltransferase (TrpD) {Pec 99.97
d1brwa170 Pyrimidine nucleoside phosphorylase {Bacillus stea 99.83
d2tpta170 Thymidine phosphorylase {Escherichia coli [TaxId: 99.82
d1o17a170 Anthranilate phosphoribosyltransferase (TrpD) {Arc 99.82
d1khda169 Anthranilate phosphoribosyltransferase (TrpD) {Pec 99.82
d1uoua168 Thymidine phosphorylase {Human (Homo sapiens) [Tax 99.8
d2elca152 Anthranilate phosphoribosyltransferase (TrpD) {The 99.65
d1brwa170 Pyrimidine nucleoside phosphorylase {Bacillus stea 85.75
d1byia_224 Dethiobiotin synthetase {Escherichia coli [TaxId: 82.82
d2tpta170 Thymidine phosphorylase {Escherichia coli [TaxId: 81.58
d1uoua168 Thymidine phosphorylase {Human (Homo sapiens) [Tax 81.29
d1o17a170 Anthranilate phosphoribosyltransferase (TrpD) {Arc 80.37
d1g6sa_ 427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 80.21
>d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
domain: Pyrimidine nucleoside phosphorylase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=1.8e-38  Score=274.86  Aligned_cols=141  Identities=46%  Similarity=0.781  Sum_probs=135.2

Q ss_pred             ceeeccCCCCCCcchhhHHHHHHhCCCcEEeecCCCCCCCCcHHHHHhcCCCCCCCCCHHHHHHHHHhhCceee-cCCCc
Q psy1330          78 VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIV-GANKQ  156 (221)
Q Consensus        78 ~vD~~gtGGdg~niSt~~a~vlAa~Gv~V~kHG~r~~ts~~GsaDvLe~L~Gi~~~~s~~~~~~~l~~~g~~fl-~a~~~  156 (221)
                      +||+|||||||+|+||+++||+|++|+||+|||||++||++||+|+||+|+|++++++++++.+++++.||+|+ +++ .
T Consensus         8 ~vD~cGTGGdG~niST~~a~V~AaaGv~VaKHGNRsvSSksGSADvLEaL~Gv~i~~~~e~~~~~l~e~g~~Fl~~a~-~   86 (260)
T d1brwa2           8 KVDKHSTGGVGDTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNENGIAIIGQTG-D   86 (260)
T ss_dssp             CEEEEECCCSSCCHHHHHHHHHHTTTCCEEEEECCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHHSEEEEECCT-T
T ss_pred             eeeeeCCCCCCchHHHHHHHHHHhCCCccccccCCccCCCCchHHHHHhccCCCCCCCHHHHHHHHHhcCceeeccCc-c
Confidence            79999999999999999999999999999999999999999999999998899999999999999999999999 898 9


Q ss_pred             CChhhhhhHHHhhhhCCCCCchhHHHHhhhhhhhcCCCeEEEeeecCCCCCCCCHHHHHHHHH
Q psy1330         157 LSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE  219 (221)
Q Consensus       157 ~~P~~~~l~~lR~~lgTi~~~~l~~asilskk~~~g~~~~v~dv~~g~~a~~~~~~~a~~la~  219 (221)
                      |||+|++++++||+++....+.++.+.+.++|+..+.-+++.+.++++++++.+.+...+++.
T Consensus        87 ~hpa~~~~~~~rr~l~~~t~~~~l~p~~~p~~~~~~~~~v~~~~~~~~~~~v~~~~g~de~s~  149 (260)
T d1brwa2          87 LTPADKKLYALRDVTATVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEARRLAR  149 (260)
T ss_dssp             SCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCCSEEEEEEEESTTSSCCSHHHHHHHHH
T ss_pred             cCcHHhhhhhhhhccCcccchhhhcccccCchhhhchhhhhhhcCccceEEEcChHHHHHHhh
Confidence            999999999999999955566778889999999999999999999999999999999998874
>d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure