Psyllid ID: psy14327

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Protein Sequence
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Secondary Structure (PSIPRED)
ccEEEEEEEEEEccccEEEEEccEEccccccccccEEEEEEEEEHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEccccccEEEccccEcccccccccHHEHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
ILNIIILILYRTgyggqflgvggtwnlneeknpdveiIASGVFVGYFVYTTVILISYgfgttqqnETLVDIIMNFIAIFLWIAVGGIALHYWIgyqnehhyqqVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Flexible Loop (DISEMBL)
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Low Complexity Region (SEG)
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Disordered region (IsUnstruct)
*LNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFI***
Disordered Region (DISOPRED)
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Disordered Region (DISEMBL)
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Disordered Region (DISPRO)
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDTVLSFIHFIKDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
242246997	160	ryanodine receptor-like [Acyrthosiphon p	0.985	0.862	0.760	1e-56
157361523	157	ryanodine receptor-like protein [Phlebot	0.992	0.885	0.647	2e-49
170035551	149	conserved hypothetical protein [Culex qu	0.978	0.919	0.656	6e-49
322784019	158	hypothetical protein SINV_07867 [Solenop	0.992	0.879	0.633	2e-48
157130363	146	hypothetical protein AaeL_AAEL002578 [Ae	0.978	0.938	0.649	2e-48
357613234	376	ryanodine receptor-like protein [Danaus	1.0	0.372	0.614	4e-48
307171863	159	hypothetical protein EAG_07058 [Camponot	0.928	0.817	0.630	1e-44
380022420	160	PREDICTED: uncharacterized protein LOC10	0.928	0.812	0.630	2e-44
345482322	159	PREDICTED: hypothetical protein LOC10067	0.928	0.817	0.607	3e-44
118781444	157	AGAP010471-PA [Anopheles gambiae str. PE	0.921	0.821	0.627	8e-44

>gi|242246997|ref|NP_001156315.1| ryanodine receptor-like [Acyrthosiphon pisum] gi|239790070|dbj|BAH71620.1| ACYPI010034 [Acyrthosiphon pisum]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/138 (76%), Positives = 124/138 (89%)

Query: 3   NIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTT 62
           NIIIL+LYRTGY G FLGVGGTWNLNEEKNPD EI+ASGVFVG+F+YT VILISYGFG+ 
Sbjct: 20  NIIILVLYRTGYRGGFLGVGGTWNLNEEKNPDAEIVASGVFVGFFIYTVVILISYGFGSN 79

Query: 63  QQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSG 122
            Q +TLVDIIMNF+ +F++IAVGGIALHYWIGYQNE+ Y  VTSER IGIT+G+LC+ SG
Sbjct: 80  HQKKTLVDIIMNFVGMFMFIAVGGIALHYWIGYQNENKYISVTSERAIGITVGVLCVISG 139

Query: 123 ALYLIDTVLSFIHFIKDL 140
           A+YL+DTVLSFIHF +++
Sbjct: 140 AIYLVDTVLSFIHFAREM 157

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157361523|gb|ABV44719.1| ryanodine receptor-like protein [Phlebotomus papatasi]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/139 (64%), Positives = 110/139 (79%)

Query: 1   ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFG 60
           +LNI+ILILYRTGYGG FLGVGGTWNLNEEK+PD EI+ASGV VG+ +YT+V LI+Y FG
Sbjct: 18  VLNIVILILYRTGYGGDFLGVGGTWNLNEEKSPDAEIVASGVIVGFMIYTSVQLITYAFG 77

Query: 61  TTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIF 120
           TT     L D IMN +  F+W+AVGG ALHYW GY  +H +  V +ER +G+ +G LCI 
Sbjct: 78  TTAHKRELSDTIMNVVGTFMWVAVGGTALHYWHGYMPDHDFLHVATERQVGLAMGALCII 137

Query: 121 SGALYLIDTVLSFIHFIKD 139
           SGALYL+DTVL+F+HF KD
Sbjct: 138 SGALYLVDTVLAFVHFAKD 156

Source: Phlebotomus papatasi

Species: Phlebotomus papatasi

Genus: Phlebotomus

Family: Psychodidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170035551|ref|XP_001845632.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877605|gb|EDS40988.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  198 bits (504), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 90/137 (65%), Positives = 113/137 (82%)

Query: 2   LNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGT 61
           LN++ILI+YRTGYGG FLGVGGTWNLNEEK+PD EI+ASGVFVGYF+YT+V LI++ FGT
Sbjct: 7   LNLVILIIYRTGYGGDFLGVGGTWNLNEEKSPDAEIVASGVFVGYFIYTSVQLITFCFGT 66

Query: 62  TQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFS 121
           T+    L D IMN +  F+WIAVGG ALHYW G+Q E+ +QQ+TSER  G+ +G LC+ +
Sbjct: 67  TKLKRELSDTIMNVVGTFMWIAVGGTALHYWHGFQPEYDFQQITSERTAGLAMGSLCVVT 126

Query: 122 GALYLIDTVLSFIHFIK 138
           GALYL D+VL+FIH+ K
Sbjct: 127 GALYLADSVLAFIHYAK 143

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322784019|gb|EFZ11159.1| hypothetical protein SINV_07867 [Solenopsis invicta]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/139 (63%), Positives = 114/139 (82%)

Query: 1   ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFG 60
           ++N+I+LILYRTGYGG+FLGVGGTWNLNE+KNPD EI+ASGVFVG+F+YT+V+L+SY FG
Sbjct: 18  VINLIVLILYRTGYGGEFLGVGGTWNLNEDKNPDAEIVASGVFVGFFIYTSVVLVSYCFG 77

Query: 61  TTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIF 120
            T+  +TLV+IIMNF+  F+++AVGG ALHYW GYQ E  +     ER IG+ +G LC+ 
Sbjct: 78  NTEHKKTLVEIIMNFVGTFMFVAVGGTALHYWHGYQPEQKFIYDAPERQIGLAVGSLCVL 137

Query: 121 SGALYLIDTVLSFIHFIKD 139
            GA YLID +LSF+H+ KD
Sbjct: 138 EGAAYLIDLILSFLHYAKD 156

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157130363|ref|XP_001655679.1| hypothetical protein AaeL_AAEL002578 [Aedes aegypti] gi|108881939|gb|EAT46164.1| AAEL002578-PA [Aedes aegypti]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/137 (64%), Positives = 111/137 (81%)

Query: 2   LNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGT 61
           LN+++LI+YRTGYGG FLGVGGTWNLNEEK+PD EI+ASGVFVGYF+YT+V LI++ FGT
Sbjct: 4   LNLVVLIIYRTGYGGDFLGVGGTWNLNEEKSPDAEIVASGVFVGYFIYTSVQLITFCFGT 63

Query: 62  TQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFS 121
           T+    L D IMN +  F+W+AVGG ALHYW GY  EH +Q +TSER  G+ LG LC+ +
Sbjct: 64  TKLKRELSDTIMNVVGTFMWVAVGGTALHYWHGYLAEHDFQHITSERTAGLALGSLCVVT 123

Query: 122 GALYLIDTVLSFIHFIK 138
           GALYL D+VL+FIH+ K
Sbjct: 124 GALYLADSVLAFIHYAK 140

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357613234|gb|EHJ68391.1| ryanodine receptor-like protein [Danaus plexippus]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 86/140 (61%), Positives = 113/140 (80%)

Query: 1   ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFG 60
           +LNI+IL+LYRTGY G+FLGVGGTWNLNEEKNPD EI+ASGV VGY +YT V ++++ FG
Sbjct: 18  VLNIVILVLYRTGYNGEFLGVGGTWNLNEEKNPDAEIVASGVIVGYLIYTLVQVVTFLFG 77

Query: 61  TTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIF 120
           TT+    + +I+MNFI +FLWIAVG +ALHYW GYQ EH +Q V +E+ +G+ +G LC+ 
Sbjct: 78  TTEHKRAMSEIVMNFIGVFLWIAVGAVALHYWGGYQGEHQFQFVFAEKQVGLAVGALCVI 137

Query: 121 SGALYLIDTVLSFIHFIKDL 140
            GA+YL+DT LS IHF K++
Sbjct: 138 QGAVYLLDTALSVIHFTKEM 157

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171863|gb|EFN63518.1| hypothetical protein EAG_07058 [Camponotus floridanus]

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 104/130 (80%)

Query: 10  YRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLV 69
           YRTGYGG+FLGVGGTWNLNE+KNPD EI+ASGV VG+F+YT+V+L+SY FG T+  +TLV
Sbjct: 27  YRTGYGGEFLGVGGTWNLNEDKNPDAEIVASGVLVGFFIYTSVVLVSYCFGNTEHKKTLV 86

Query: 70  DIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDT 129
           +IIMNF+  F++IAVGG ALHYW GYQ E  +     ER IG+ +G LC+  GA YL+D 
Sbjct: 87  EIIMNFVGTFMFIAVGGTALHYWHGYQPEQKFIYDAPERQIGLAVGALCVIEGATYLVDL 146

Query: 130 VLSFIHFIKD 139
           +LSF+H+ KD
Sbjct: 147 ILSFLHYAKD 156

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022420|ref|XP_003695044.1| PREDICTED: uncharacterized protein LOC100867326 [Apis florea]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 105/130 (80%)

Query: 10  YRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLV 69
           YRTGY G+FLGVGGTWNLNE+KNPD EIIASGV VG+F+YT+V+LI+Y FG+    +TLV
Sbjct: 27  YRTGYKGEFLGVGGTWNLNEDKNPDAEIIASGVLVGFFIYTSVVLITYCFGSMYHKKTLV 86

Query: 70  DIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDT 129
           +IIMNF+  F++IAVGG ALHYW GYQ E+ Y  +  ER IG+ +G LC+  GA+YL+D 
Sbjct: 87  EIIMNFVGTFMFIAVGGTALHYWHGYQPENKYDSIVQERQIGLAVGALCVIEGAMYLVDL 146

Query: 130 VLSFIHFIKD 139
           +LSF+HF K+
Sbjct: 147 ILSFLHFAKN 156

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482322|ref|XP_003424573.1| PREDICTED: hypothetical protein LOC100679916 [Nasonia vitripennis]

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 106/130 (81%)

Query: 10  YRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLV 69
           YRTGY G+FLGVGGTWNLNEEKNPD EI+ASGVFVG+F+YT+V+LIS+ FGT    +++V
Sbjct: 27  YRTGYSGEFLGVGGTWNLNEEKNPDAEIVASGVFVGFFIYTSVVLISFCFGTMDHKKSIV 86

Query: 70  DIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDT 129
           ++IMNF+ +F+++AVGG ALHYW GY +EH Y  V +ER +G+ LG LC+  GALYL+D 
Sbjct: 87  EVIMNFVGMFMFLAVGGTALHYWHGYMSEHKYLHVATERQVGLALGSLCVLEGALYLVDL 146

Query: 130 VLSFIHFIKD 139
           +L+ +H  K+
Sbjct: 147 ILTGLHIAKE 156

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118781444|ref|XP_311473.3| AGAP010471-PA [Anopheles gambiae str. PEST] gi|116129952|gb|EAA07189.3| AGAP010471-PA [Anopheles gambiae str. PEST]

 Score =  181 bits (460), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 81/129 (62%), Positives = 102/129 (79%)

Query: 10  YRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFGTTQQNETLV 69
           YRTGYGG FLG+GGTWNLNEEK+PD EI+ASGVFVG+ +YT V L+++GFGTT+    L 
Sbjct: 27  YRTGYGGDFLGIGGTWNLNEEKSPDAEIVASGVFVGFIIYTGVQLLTFGFGTTKHKYELS 86

Query: 70  DIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIFSGALYLIDT 129
           D IMN +  F+W+AVGG ALHYW GY  EH ++ +TSER  G+ LG LC+ +GALYL D+
Sbjct: 87  DTIMNVVGTFMWVAVGGTALHYWHGYLAEHDFENITSERTAGLALGALCVINGALYLADS 146

Query: 130 VLSFIHFIK 138
           VL+FIH+ K
Sbjct: 147 VLAFIHYTK 155

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
FB|FBgn0036945	162	Ssk "Snakeskin" [Drosophila me	0.985	0.851	0.557	1.7e-41

FB|FBgn0036945 Ssk "Snakeskin" [Drosophila melanogaster (taxid:7227)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 77/138 (55%), Positives = 102/138 (73%)

Query:     1 ILNIIILILYRTGYGGQFLGVGGTWNLNEEKNPDVEIIASGVFVGYFVYTTVILISYGFG 60
             I+N++I+ LYR G GG+FLG+GGTWNLNEEK+ D EI+ASGV VG+ +YT    I++ FG
Sbjct:    18 IINLVIIFLYRWGDGGEFLGIGGTWNLNEEKSADAEIVASGVMVGFLIYTGCHTIAFAFG 77

Query:    61 TTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQNEHHYQQVTSERGIGITLGILCIF 120
             TT+    L D IMN +   +WIAVGG+ALHYW GY ++  +  V SER +GI +G LC+ 
Sbjct:    78 TTKHKGELCDTIMNVVGCIMWIAVGGVALHYWKGYMSDEGFLYVNSERQVGIAMGSLCVI 137

Query:   121 SGALYLIDTVLSFIHFIK 138
              GALYL+DTVL+ IH+ K
Sbjct:   138 EGALYLLDTVLACIHYSK 155


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.149   0.462    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      140       140   0.00091  102 3  11 22  0.37    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  551 (59 KB)
  Total size of DFA:  136 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:02
  No. of threads or processors used:  24
  Search cpu time:  12.98u 0.08s 13.06t   Elapsed:  00:00:14
  Total cpu time:  12.98u 0.08s 13.06t   Elapsed:  00:00:21
  Start:  Thu Aug 15 12:31:06 2013   End:  Thu Aug 15 12:31:27 2013

GO:0003674 "molecular_function" evidence=ND

GO:0007496 "anterior midgut development" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0005920 "smooth septate junction" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0061028 "establishment of endothelial barrier" evidence=IMP

GO:0060576 "intestinal epithelial cell development" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	140
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	97.2

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=97.20  E-value=0.0022  Score=45.74  Aligned_cols=84  Identities=20%  Similarity=0.250  Sum_probs=61.4

Q ss_pred             hhhHHHHHHHhh---cCcccchhhHHHHHHHHHHHHHHHHhhhhhhhhccccc----ccccceeccccchhhhhhhHHhh
Q psy14327         48 VYTTVILISYGF---GTTQQNETLVDIIMNFIAIFLWIAVGGIALHYWIGYQN----EHHYQQVTSERGIGITLGILCIF  120 (140)
Q Consensus        48 Ii~~~~ligy~~---gt~~~kr~~iDi~~nliGc~LFIAvGal~l~~w~gy~~----e~~~~~~~~~R~~gLA~GsL~II  120 (140)
                      +++...++.+++   ..+....+..|..++.+.++||+++++..-++|.+...    +.......+..+...|..+++.+
T Consensus        54 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~f~~~  133 (144)
T PF01284_consen   54 LYTLIFLLLYLFSLKYRPRIPWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNTGNDYSYSGCSRCGAWKAAAAFGFL  133 (144)
T ss_pred             HHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcCCCCCCcchhHHHHHHHHHH
Confidence            446666777775   23334446799999999999999999999999987211    11122333445568899999999


Q ss_pred             hhHHHHHHHHH
Q psy14327        121 SGALYLIDTVL  131 (140)
Q Consensus       121 nGa~fLvDavl  131 (140)
                      |-++|++|++|
T Consensus       134 ~~~l~~~s~~l  144 (144)
T PF01284_consen  134 NWLLFIVSAVL  144 (144)
T ss_pred             HHHHHHHHHHC
Confidence            99999999875

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00