Psyllid ID: psy14347

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MNLTACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA
Secondary Structure (PSIPRED)
ccHHHHHcccccccccccccccccccccccccHHHHccccccccEEEEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHHcccccEEEEccccEEEEHHHHHHHHHccccccccccccHHHHHcccccccccccccccEEEEEEccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHcccccccccHHHHHHHHHHccccEEEEcccEEcccccccccccEEEEEEccccHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccccccccccccEEEcccHHccccccccccEEEEEEEcccccHHHHHHHHHHHcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHcccccccccccccccHHHHcccccccccccccEEEcEEEcccccccccccEEccHHHccccccccccccccEEEcHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccHEEEEEEEccccHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mnltacvegykhdqpcstrpinnynypfisKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQswgyekrfsdvpivtvfilgydpdneglqIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAanyckhskfyffadddfyVSTRNVLRFLrnplqypqylelpietiqsksnimdyelpsdvklfsgfvfvssphrhytskwyislqeypyhlwppyvtagsyVVSREVLLDFYFAshftkhfrfddiyLGILakktntepfhcgefyfykkdyslhNYQYVIAshgygnhdELLRVWNEQRGIGNA
Flexible Loop (DISEMBL)
mnltacvegykhdqpcstrpiNNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIrqswgyekrfsdvPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA
Low Complexity Region (SEG)
MNLTACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA
Disordered region (IsUnstruct)
*****CVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWN********
Disordered Region (DISOPRED)
*NLTAC*************PINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNE**QIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWN*QRG****
Disordered Region (DISEMBL)
MNLTACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA
Disordered Region (DISPRO)
*NLTACVEGY*****CSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPL*YPQYL************IMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRG****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNLTACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	316	2.2.26 [Sep-21-2011]
Q24157	325	Beta-1,3-galactosyltransf	yes	N/A	0.762	0.741	0.464	1e-60
Q9MYM7	326	Beta-1,3-galactosyltransf	N/A	N/A	0.835	0.809	0.310	8e-38
Q7JK26	326	Beta-1,3-galactosyltransf	yes	N/A	0.835	0.809	0.310	8e-38
Q7JK25	326	Beta-1,3-galactosyltransf	N/A	N/A	0.835	0.809	0.310	8e-38
O54904	326	Beta-1,3-galactosyltransf	yes	N/A	0.835	0.809	0.310	8e-38
Q9Y5Z6	326	Beta-1,3-galactosyltransf	yes	N/A	0.835	0.809	0.310	8e-38
Q7JK24	326	Beta-1,3-galactosyltransf	N/A	N/A	0.835	0.809	0.310	8e-38
O54905	422	Beta-1,3-galactosyltransf	no	N/A	0.873	0.654	0.287	6e-32
O43825	422	Beta-1,3-galactosyltransf	no	N/A	0.873	0.654	0.283	5e-31
Q5R5Y3	422	Beta-1,3-galactosyltransf	no	N/A	0.819	0.613	0.291	6e-31

>sp|Q24157|BRN_DROME Beta-1,3-galactosyltransferase brn OS=Drosophila melanogaster GN=brn PE=1 SV=2

 Score =  233 bits (595), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/267 (46%), Positives = 170/267 (63%), Gaps = 26/267 (9%)

Query: 46  RVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERY 105
           R+  ++KSA+ +  RR AIR++WGYE RFSDV +  VF+LG   D+E    ++A ES  +
Sbjct: 79  RLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSEK---DVAWESREH 135

Query: 106 NDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQY 165
            DI+QA+F D+YFNNT+KTM+G +WA++    S+FY F DDD+YVS +NVL+FL    Q 
Sbjct: 136 GDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQS 195

Query: 166 PQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPP 225
            Q  EL                     LF+G VF +SP RH  SKWY+SL+EYP+  WPP
Sbjct: 196 HQ-PEL---------------------LFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPP 233

Query: 226 YVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDY-S 284
           YVTAG++++S++ L   Y AS     FRFDD+YLGI+A K      HC +F F++  Y  
Sbjct: 234 YVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKG 293

Query: 285 LHNYQYVIASHGYGNHDELLRVWNEQR 311
             +Y  VIASH +G+ +E+ RVWNE R
Sbjct: 294 PDSYSSVIASHEFGDPEEMTRVWNECR 320

Neurogenic protein essential for the development and maintenance of epithelial structure. Required in the germline for establishing the follicular epithelium and for determining the dorsal-ventral polarity. Collaborates with Notch on the apical surface of follicle cells to mediate germline-follicle cell adhesion. Brn has a role in chorion formation.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 6EC: 2

>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1

 Score =  157 bits (398), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 29/293 (9%)

Query: 18  TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
           TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct: 55  TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query: 78  PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
            I T+F+LG + D   L   + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct: 111 KIATLFLLGKNAD-PVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query: 138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGF 197
           +K+    D D +V+  N++  L  P   P+                        + F+G+
Sbjct: 170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRR-----------------------RYFTGY 206

Query: 198 VFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI 257
           V    P R   SKWY+    YP   +PP+ +   Y+ S +V    Y  S  T+    +D+
Sbjct: 207 VINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDV 266

Query: 258 YLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQ 310
           Y+G+  +K    PF    F  +K  YSL  Y+ VI  H   + +E+ R+WN+ 
Sbjct: 267 YVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQI-SPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1

 Score =  157 bits (398), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 29/293 (9%)

Query: 18  TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
           TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct: 55  TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query: 78  PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
            I T+F+LG + D   L   + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct: 111 KIATLFLLGKNAD-PVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query: 138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGF 197
           +K+    D D +V+  N++  L  P   P+                        + F+G+
Sbjct: 170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRR-----------------------RYFTGY 206

Query: 198 VFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI 257
           V    P R   SKWY+    YP   +PP+ +   Y+ S +V    Y  S  T+    +D+
Sbjct: 207 VINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDV 266

Query: 258 YLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQ 310
           Y+G+  +K    PF    F  +K  YSL  Y+ VI  H   + +E+ R+WN+ 
Sbjct: 267 YVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQI-SPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1

 Score =  157 bits (398), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 29/293 (9%)

Query: 18  TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
           TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct: 55  TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query: 78  PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
            I T+F+LG + D   L   + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct: 111 KIATLFLLGKNAD-PVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query: 138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGF 197
           +K+    D D +V+  N++  L  P   P+                        + F+G+
Sbjct: 170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRR-----------------------RYFTGY 206

Query: 198 VFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI 257
           V    P R   SKWY+    YP   +PP+ +   Y+ S +V    Y  S  T+    +D+
Sbjct: 207 VINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDV 266

Query: 258 YLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQ 310
           Y+G+  +K    PF    F  +K  YSL  Y+ VI  H   + +E+ R+WN+ 
Sbjct: 267 YVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQI-SPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan paniscus (taxid: 9597)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O54904|B3GT1_MOUSE Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2

 Score =  157 bits (398), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 29/293 (9%)

Query: 18  TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
           TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct: 55  TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query: 78  PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
            I T+F+LG + D   L   + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct: 111 KIATLFLLGKNAD-PVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query: 138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGF 197
           +K+    D D +V+  N++  L  P   P+                        + F+G+
Sbjct: 170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRR-----------------------RYFTGY 206

Query: 198 VFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI 257
           V    P R   SKWY+    YP   +PP+ +   Y+ S +V    Y  S  T+    +D+
Sbjct: 207 VINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDV 266

Query: 258 YLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQ 310
           Y+G+  +K    PF    F  +K  YSL  Y+ VI  H   + +E+ R+WN+ 
Sbjct: 267 YVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQI-SPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9Y5Z6|B3GT1_HUMAN Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=2 SV=1

 Score =  157 bits (398), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 29/293 (9%)

Query: 18  TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
           TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct: 55  TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query: 78  PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
            I T+F+LG + D   L   + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct: 111 KIATLFLLGKNAD-PVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query: 138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGF 197
           +K+    D D +V+  N++  L  P   P+                        + F+G+
Sbjct: 170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRR-----------------------RYFTGY 206

Query: 198 VFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI 257
           V    P R   SKWY+    YP   +PP+ +   Y+ S +V    Y  S  T+    +D+
Sbjct: 207 VINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDV 266

Query: 258 YLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQ 310
           Y+G+  +K    PF    F  +K  YSL  Y+ VI  H   + +E+ R+WN+ 
Sbjct: 267 YVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQI-SPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK24|B3GT1_GORGO Beta-1,3-galactosyltransferase 1 OS=Gorilla gorilla gorilla GN=B3GALT1 PE=3 SV=1

 Score =  157 bits (398), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 29/293 (9%)

Query: 18  TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
           TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct: 55  TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query: 78  PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
            I T+F+LG + D   L   + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct: 111 KIATLFLLGKNAD-PVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query: 138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGF 197
           +K+    D D +V+  N++  L  P   P+                        + F+G+
Sbjct: 170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRR-----------------------RYFTGY 206

Query: 198 VFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI 257
           V    P R   SKWY+    YP   +PP+ +   Y+ S +V    Y  S  T+    +D+
Sbjct: 207 VINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDV 266

Query: 258 YLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQ 310
           Y+G+  +K    PF    F  +K  YSL  Y+ VI  H   + +E+ R+WN+ 
Sbjct: 267 YVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQI-SPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Gorilla gorilla gorilla (taxid: 9595)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O54905|B3GT2_MOUSE Beta-1,3-galactosyltransferase 2 OS=Mus musculus GN=B3galt2 PE=2 SV=2

 Score =  138 bits (347), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 34/310 (10%)

Query: 4   TACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLA 63
           T    G  +++  +  P N+Y++ +I    +KC    +++   ++ ++ +     E R A
Sbjct: 115 TLSANGSIYNEKGTGHP-NSYHFKYIINEPEKC----QEKSPFLILLIAAEPGQIEARRA 169

Query: 64  IRQSWGYEKRFSDVPIVTVFILGYDPDNEG-LQIEIAEESERYNDIVQAKFIDSYFNNTI 122
           IRQ+WG E     + I+ VF+LG      G LQ  I EES +Y+DI+Q +++D+Y+N TI
Sbjct: 170 IRQTWGNETLAPGIQIIRVFLLGISIKLNGYLQHAIQEESRQYHDIIQQEYLDTYYNLTI 229

Query: 123 KTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNI 182
           KT+MG  W A YC H+ +    D D +V+T  ++  L  P                    
Sbjct: 230 KTLMGMNWVATYCPHTPYVMKTDSDMFVNTEYLIHKLLKP-------------------- 269

Query: 183 MDYELPSDVKLFSGFVFVS-SPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLD 241
              +LP     F+G++    +P+R+  SKWY+    YP   +P + +   YV S ++   
Sbjct: 270 ---DLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEK 326

Query: 242 FYFASHFTKHFRFDDIYLGILAKKTNTEPF-HCGEFYF--YKKDYSLHNYQYVIASHGYG 298
            +  S   +    +D+Y+GI   K   +P     EF F  ++  YS   Y ++I SH + 
Sbjct: 327 IFKVSLGIRRLHLEDVYVGICLAKLRVDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQF- 385

Query: 299 NHDELLRVWN 308
              EL++ WN
Sbjct: 386 QPSELIKYWN 395

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Can also utilize substrates with a terminal galactose residue, albeit with lower efficiency. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O43825|B3GT2_HUMAN Beta-1,3-galactosyltransferase 2 OS=Homo sapiens GN=B3GALT2 PE=2 SV=1

 Score =  135 bits (339), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 34/310 (10%)

Query: 4   TACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLA 63
           T    G  +++  +  P N+Y++ +I    +KC    +++   ++ ++ +     E R A
Sbjct: 115 TLSANGSIYNEKGTGHP-NSYHFKYIINEPEKC----QEKSPFLILLIAAEPGQIEARRA 169

Query: 64  IRQSWGYEKRFSDVPIVTVFILGYDPDNEG-LQIEIAEESERYNDIVQAKFIDSYFNNTI 122
           IRQ+WG E     + I  +F+LG      G LQ  I EES +Y+DI+Q +++D+Y+N TI
Sbjct: 170 IRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTI 229

Query: 123 KTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNI 182
           KT+MG  W A YC H  +    D D +V+T  ++  L  P                    
Sbjct: 230 KTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKP-------------------- 269

Query: 183 MDYELPSDVKLFSGFVFVS-SPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLD 241
              +LP     F+G++    +P+R+  SKWY+    YP   +P + +   YV S ++   
Sbjct: 270 ---DLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEK 326

Query: 242 FYFASHFTKHFRFDDIYLGILAKKTNTEPF-HCGEFYF--YKKDYSLHNYQYVIASHGYG 298
            +  S   +    +D+Y+GI   K   +P     EF F  ++  YS   Y ++I SH + 
Sbjct: 327 IFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQF- 385

Query: 299 NHDELLRVWN 308
              EL++ WN
Sbjct: 386 QPSELIKYWN 395

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Can also utilize substrates with a terminal galactose residue, albeit with lower efficiency. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R5Y3|B3GT2_PONAB Beta-1,3-galactosyltransferase 2 OS=Pongo abelii GN=B3GALT2 PE=2 SV=1

 Score =  135 bits (339), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 33/292 (11%)

Query: 22  NNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVT 81
           N+Y++ +I    +KC    +++   ++ ++ +     E R AIRQ+WG E     + I  
Sbjct: 132 NSYHFKYIINEPEKC----QEKSPFLILLIAAEPGQIEARRAIRQTWGNESLAPGIQITR 187

Query: 82  VFILGYDPDNEG-LQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKF 140
           +F+LG      G LQ  I EES +Y+DI+Q +++D+Y+N TIKT+MG  W A YC H  +
Sbjct: 188 IFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPY 247

Query: 141 YFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFV 200
               D D +V+T  ++  L  P                       +LP     F+G++  
Sbjct: 248 VMKTDSDMFVNTEYLINKLLKP-----------------------DLPPRHNYFTGYLMR 284

Query: 201 S-SPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYL 259
             +P+R+  SKWY+    YP   +P + +   YV S ++    +  S   +    +D+Y+
Sbjct: 285 GYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYV 344

Query: 260 GILAKKTNTEPF-HCGEFYF--YKKDYSLHNYQYVIASHGYGNHDELLRVWN 308
           GI   K   +P     EF F  ++  YS   Y ++I SH +    EL++ WN
Sbjct: 345 GICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQF-QPSELIKYWN 395

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Can also utilize substrates with a terminal galactose residue, albeit with lower efficiency. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
350408453	376	PREDICTED: beta-1,3-galactosyltransferas	0.968	0.813	0.621	1e-109
340719381	376	PREDICTED: beta-1,3-galactosyltransferas	0.968	0.813	0.621	1e-109
307204109	357	Beta-1,3-galactosyltransferase brn [Harp	0.987	0.873	0.574	1e-108
380015228	372	PREDICTED: beta-1,3-galactosyltransferas	0.977	0.830	0.590	1e-107
345489512	398	PREDICTED: beta-1,3-galactosyltransferas	0.914	0.726	0.523	7e-99
91082231	352	PREDICTED: similar to AGAP002097-PA [Tri	0.974	0.875	0.542	2e-96
328711392	362	PREDICTED: beta-1,3-galactosyltransferas	0.955	0.834	0.545	7e-94
332375618	366	unknown [Dendroctonus ponderosae]	0.889	0.767	0.556	7e-94
312370937	401	hypothetical protein AND_22842 [Anophele	0.968	0.763	0.505	1e-93
290562473	369	Beta-1,3-galactosyltransferase brn [Lepe	0.911	0.780	0.555	2e-92

>gi|350408453|ref|XP_003488407.1| PREDICTED: beta-1,3-galactosyltransferase brn-like [Bombus impatiens]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/317 (62%), Positives = 239/317 (75%), Gaps = 11/317 (3%)

Query: 7   VEGYKHDQPCSTRPINNYNYPFISKCEQKCA--AYNEKEQIRVVYIVKSALRHFERRLAI 64
           V   +H++  +  PIN Y Y F+   EQKC   AYN     RVVYIVKSA+ +FERRLAI
Sbjct: 64  VNALRHNRKPTVEPINEYKYTFLIDNEQKCVDPAYN---MFRVVYIVKSAIENFERRLAI 120

Query: 65  RQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKT 124
           R SWGYEKRF DVP  TVF+LG  P ++ LQ ++  E+ +Y DI+QA FIDSY+NNTIKT
Sbjct: 121 RNSWGYEKRFFDVPSRTVFMLGVHPYDDELQTKVRIEAAKYKDIIQADFIDSYYNNTIKT 180

Query: 125 MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELP--IETIQSKSNI 182
           MM FKW   YC +SKFY F DDD YVS +NVLRF+RNP  YP YL+ P  I+T   K  I
Sbjct: 181 MMAFKWLVKYCSNSKFYMFVDDDIYVSVKNVLRFIRNPTNYPDYLKEPKKIDT-HKKREI 239

Query: 183 MD---YELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVL 239
            D    E   DV+LF+GFVFVSSPHRH +SKWYISL EYPYHLWPPYVTAG+Y++SRE L
Sbjct: 240 KDSDKMEELKDVRLFAGFVFVSSPHRHKSSKWYISLNEYPYHLWPPYVTAGAYILSREAL 299

Query: 240 LDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGN 299
           LD Y+ S +TK+F+FDDI+LG++AKK + EPFHC EF+FYKKDY+  NY+YVI+SHGYGN
Sbjct: 300 LDMYYTSLYTKYFKFDDIFLGLVAKKADIEPFHCEEFHFYKKDYTKFNYKYVISSHGYGN 359

Query: 300 HDELLRVWNEQRGIGNA 316
            +ELL VWNEQ+ +GNA
Sbjct: 360 PNELLNVWNEQKALGNA 376

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719381|ref|XP_003398133.1| PREDICTED: beta-1,3-galactosyltransferase brn-like [Bombus terrestris]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/317 (62%), Positives = 238/317 (75%), Gaps = 11/317 (3%)

Query: 7   VEGYKHDQPCSTRPINNYNYPFISKCEQKCA--AYNEKEQIRVVYIVKSALRHFERRLAI 64
           V   +H++  +  PIN Y Y F+   EQKC   AYN     RVVYIVKSA+ +FERRLAI
Sbjct: 64  VNALRHNRKPTVEPINEYKYTFLIDNEQKCVDPAYN---MFRVVYIVKSAIENFERRLAI 120

Query: 65  RQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKT 124
           R SWGYEKRF DVP  TVF+LG  P ++ LQ  +  E+ +Y DI+QA FIDSY+NNTIKT
Sbjct: 121 RNSWGYEKRFFDVPSRTVFMLGVHPYDDELQTNVRIEAAKYKDIIQADFIDSYYNNTIKT 180

Query: 125 MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELP--IETIQSKSNI 182
           MM FKW   YC +SKFY F DDD YVS +NVLRF+RNP  YP YL+ P  I+T   K  I
Sbjct: 181 MMAFKWLVKYCSNSKFYMFVDDDIYVSVKNVLRFIRNPTNYPDYLKEPKKIDT-HKKREI 239

Query: 183 MD---YELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVL 239
            D    E   DV+LF+GFVFVSSPHRH +SKWYISL EYPYHLWPPYVTAG+Y++SRE L
Sbjct: 240 KDSDKMEELKDVRLFAGFVFVSSPHRHKSSKWYISLNEYPYHLWPPYVTAGAYILSREAL 299

Query: 240 LDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGN 299
           LD Y+ S +TK+F+FDDI+LG++AKK + EPFHC EF+FYKKDY+  NY+YVI+SHGYGN
Sbjct: 300 LDMYYTSLYTKYFKFDDIFLGLVAKKADIEPFHCEEFHFYKKDYTKFNYKYVISSHGYGN 359

Query: 300 HDELLRVWNEQRGIGNA 316
            +ELL VWNEQ+ +GNA
Sbjct: 360 PNELLNVWNEQKALGNA 376

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204109|gb|EFN82978.1| Beta-1,3-galactosyltransferase brn [Harpegnathos saltator]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 182/317 (57%), Positives = 241/317 (76%), Gaps = 5/317 (1%)

Query: 2   NLTACVEGYKHDQPCSTRPINNYNYPFISKCEQKC--AAYNEKEQIRVVYIVKSALRHFE 59
           N+   V   +H +    +PIN Y Y FI    QKC  A Y+      VVYIVK+AL HFE
Sbjct: 44  NVHDLVNALRHHEKPDVKPINEYKYSFILHNPQKCTEAGYS---TFHVVYIVKTALEHFE 100

Query: 60  RRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFN 119
           RR  IR++WGYEKRF DVP+ T+F++G  P++E +Q ++  E+ +Y DI+QA FIDSY+N
Sbjct: 101 RRAVIRKTWGYEKRFFDVPLRTIFLVGMHPNDEEMQAKLKIEAAKYKDIIQADFIDSYYN 160

Query: 120 NTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSK 179
           NTIKTMMGFKW   YC +SKFY F DDD Y+S +NVLRF+RNP +YP Y + P +    K
Sbjct: 161 NTIKTMMGFKWIVKYCSNSKFYMFCDDDMYISVKNVLRFVRNPDKYPGYFKEPKKLAAHK 220

Query: 180 SNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVL 239
             I   +L +DV+LF+GFVFVSSPHR+ +SKWY+SL+EYPYHLWPPYVTAG+Y++S+E L
Sbjct: 221 REIKLTDLINDVRLFAGFVFVSSPHRYKSSKWYVSLKEYPYHLWPPYVTAGAYILSKEAL 280

Query: 240 LDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGN 299
           LD Y+ S +TKHF+FDDI+LG++AKK   EPFHC +F+FYK++Y+ +NY+YV+ASHGYG+
Sbjct: 281 LDMYYTSFYTKHFKFDDIFLGLIAKKAEIEPFHCEDFHFYKREYTKYNYKYVVASHGYGD 340

Query: 300 HDELLRVWNEQRGIGNA 316
            +ELL+VWNEQ+ +GNA
Sbjct: 341 PNELLQVWNEQKALGNA 357

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015228|ref|XP_003691609.1| PREDICTED: beta-1,3-galactosyltransferase brn-like [Apis florea]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/310 (59%), Positives = 231/310 (74%), Gaps = 1/310 (0%)

Query: 7   VEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQ 66
           V   +H++  +  PIN Y Y F+   +QKC     K    VVYIVKSA+ +FERR AIR 
Sbjct: 64  VNALRHNEKPTIEPINEYKYKFLLNNQQKCIDAAHK-IFHVVYIVKSAIENFERRSAIRN 122

Query: 67  SWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMM 126
           SWG+EKRF DVP  T+F+LG  P N+ +Q ++  E+ +Y DI+QA FI+SY+NNT KTMM
Sbjct: 123 SWGFEKRFFDVPSRTIFMLGIYPHNDEIQAKVKIEAAKYKDIIQADFIESYYNNTYKTMM 182

Query: 127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYE 186
            FKW   YC +SKFY F DDD YVS +NVLRF+RNP  YP YL+ P +    K  I   +
Sbjct: 183 SFKWLVKYCSNSKFYMFVDDDIYVSVKNVLRFIRNPTNYPDYLKEPKKFDVHKREIKSND 242

Query: 187 LPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFAS 246
           LP D++L++GFVF+SSPHRH +SKWY+SL EYPYHLWPPYVTAG+Y++S+E LLD Y+ S
Sbjct: 243 LPEDIRLYAGFVFISSPHRHKSSKWYVSLSEYPYHLWPPYVTAGAYILSKEALLDMYYTS 302

Query: 247 HFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRV 306
            +TKHF+FDDI+LG++AKK N EPFHC EF+FYKKDY+  NY+YVI SHGYGN  ELL V
Sbjct: 303 FYTKHFKFDDIFLGLVAKKANIEPFHCEEFHFYKKDYTKFNYKYVITSHGYGNSTELLNV 362

Query: 307 WNEQRGIGNA 316
           WNEQ+ +GNA
Sbjct: 363 WNEQKALGNA 372

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345489512|ref|XP_003426152.1| PREDICTED: beta-1,3-galactosyltransferase brn-like, partial [Nasonia vitripennis]

 Score =  366 bits (940), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 176/336 (52%), Positives = 226/336 (67%), Gaps = 47/336 (13%)

Query: 7   VEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQ 66
           +   +H++     PIN YNY F+     KC   + +  IRVV+++KSA+ H+ERR+AIR 
Sbjct: 64  IVSLRHNKKPDVPPINEYNYTFVHDIRDKCLEPSSR-TIRVVFLIKSAVEHYERRMAIRN 122

Query: 67  SWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMM 126
           SWG+EKRFSDV   TVF+LG    +  L+  +  E+ +Y DIVQA F D+Y+NNTIKTMM
Sbjct: 123 SWGFEKRFSDVAFKTVFLLGTHYHDHELRTRVNSEAVKYRDIVQADFYDTYYNNTIKTMM 182

Query: 127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLE---------------- 170
           GFKWA NYC +SKFY F DDD Y+S +NVLRFLRNP  YP+YL+                
Sbjct: 183 GFKWAVNYCSNSKFYMFVDDDMYISVKNVLRFLRNPSLYPEYLKDSIKFKDLAHLKNRYR 242

Query: 171 ------------------------------LPIETIQSKSNIMDYELPSDVKLFSGFVFV 200
                                         + I  ++ K  + D+ELP DV+LF+GFVFV
Sbjct: 243 RSTIEDENKVNNISNINKTTAVSAKENVKLIEIPKMRKKRQVFDFELPDDVRLFAGFVFV 302

Query: 201 SSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLG 260
           SSPHRH TSKWY+SL+EYPYHLWPPYVTAG+Y++SRE LLD Y+AS +TKHFRFDDI+LG
Sbjct: 303 SSPHRHKTSKWYVSLKEYPYHLWPPYVTAGAYILSREALLDMYYASMYTKHFRFDDIFLG 362

Query: 261 ILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHG 296
           ++AKK + EPFHC EF+FYKKDY+ +NY+YVI+SHG
Sbjct: 363 LVAKKADIEPFHCEEFHFYKKDYTKYNYKYVISSHG 398

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082231|ref|XP_972668.1| PREDICTED: similar to AGAP002097-PA [Tribolium castaneum] gi|270007224|gb|EFA03672.1| hypothetical protein TcasGA2_TC013770 [Tribolium castaneum]

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 171/315 (54%), Positives = 225/315 (71%), Gaps = 7/315 (2%)

Query: 2   NLTACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERR 61
           ++   V+  + +      PIN YN+ F      KC      E +R+V++VKSA  HF+RR
Sbjct: 45  DIEELVQQLRSNATPKVPPINTYNFRFAKSSSNKC---KNVENLRLVFLVKSAPEHFDRR 101

Query: 62  LAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNT 121
           LAIR SWG+E RFSDV I TVF+LG   D    Q++I +E E Y DIVQA F D Y+NNT
Sbjct: 102 LAIRSSWGFEHRFSDVEIRTVFLLGERSDATS-QLKIRKEFESYKDIVQANFTDDYYNNT 160

Query: 122 IKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSN 181
            KTMMGF WAA +C +++FY F DDD+YVST+N+LRF+RNP  YP YLE      Q K +
Sbjct: 161 YKTMMGFTWAARFCPNARFYMFVDDDYYVSTKNLLRFIRNPTAYPNYLE---PAKQRKLH 217

Query: 182 IMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLD 241
             D++L  +V+L++GFVFVS+PHRH TSKWY+SL EYPY +WPPYVTAG+YVVSRE LLD
Sbjct: 218 QYDFDLDVNVRLYAGFVFVSAPHRHRTSKWYVSLSEYPYDMWPPYVTAGAYVVSREALLD 277

Query: 242 FYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHD 301
            Y+AS +TKHF+FDDIY+G+LA K   EP+HC +FYF K  Y+  +Y+Y++A+HGYG+  
Sbjct: 278 MYYASFYTKHFKFDDIYVGLLAYKCKIEPYHCDQFYFNKLGYNFEDYKYLVATHGYGDPF 337

Query: 302 ELLRVWNEQRGIGNA 316
           EL++VW +QR   +A
Sbjct: 338 ELVKVWTQQRAKNSA 352

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328711392|ref|XP_001946175.2| PREDICTED: beta-1,3-galactosyltransferase brn-like [Acyrthosiphon pisum]

 Score =  350 bits (897), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 174/319 (54%), Positives = 220/319 (68%), Gaps = 17/319 (5%)

Query: 2   NLTACV----EGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRH 57
           N++ CV     G     PC    IN   Y  +     KC        I ++ +VKSAL H
Sbjct: 57  NISECVVNAQSGKTDKLPCIN--INALEYDLLLSNNTKC-----NRNIHLLVLVKSALNH 109

Query: 58  FERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSY 117
           F+RR  IR++WG+E RFSDVP  TVFILG   D + L+  I EE E+Y DIVQ  F+D Y
Sbjct: 110 FDRRRTIRKTWGFENRFSDVPTRTVFILGKSFDID-LEKRIKEEHEQYGDIVQYDFVDEY 168

Query: 118 FNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQ 177
           +NNTIKTM   KWA+ +C  S+FYFF+DDD YVS +NVLR+LRNP +YP+YL   ++  Q
Sbjct: 169 YNNTIKTMNAIKWASTHCNDSRFYFFSDDDMYVSMKNVLRYLRNPTEYPEYLSKEVKGKQ 228

Query: 178 SKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSRE 237
           SK     + LPSDV LF+G+VF SSP RH  SKWY+SL EYPYH+WPPYVTAG+Y++S+ 
Sbjct: 229 SK-----HTLPSDVVLFTGYVFNSSPLRHQISKWYVSLSEYPYHMWPPYVTAGAYILSKA 283

Query: 238 VLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGY 297
            ++ FY+ S +TK FRFDDIYLG+LAKK N +P HC   YFYKKDYS+ +Y+YVIASHGY
Sbjct: 284 AIVKFYYGSSYTKRFRFDDIYLGLLAKKLNIKPLHCEHIYFYKKDYSISSYKYVIASHGY 343

Query: 298 GNHDELLRVWNEQRGIGNA 316
            + +ELL VW EQ+  GNA
Sbjct: 344 DDSEELLNVWLEQKSNGNA 362

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332375618|gb|AEE62950.1| unknown [Dendroctonus ponderosae]

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 162/291 (55%), Positives = 215/291 (73%), Gaps = 10/291 (3%)

Query: 32  CEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDN 91
           C+ KC    +   +R+VY++KS++ +F+RR+AIR SWG++KRFSDV I T+F++G   D 
Sbjct: 80  CDTKCRGVTD---LRLVYLIKSSVANFDRRVAIRSSWGFQKRFSDVEIRTLFLIGLQSD- 135

Query: 92  EGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVS 151
           + +Q  + EES++Y DI+QA + DSYFNNT KTM GF+W   YCK++KFY F DDD+YVS
Sbjct: 136 DNMQASLNEESQKYKDIIQANYTDSYFNNTYKTMSGFEWVMKYCKNAKFYMFVDDDYYVS 195

Query: 152 TRNVLRFLRNPLQYPQYLELPI----ETIQSKSNI--MDYELPSDVKLFSGFVFVSSPHR 205
           T+NVLRFLR P  YP YL+ P+      IQ +  +  +D+ L  DV+L++G+ F SSPHR
Sbjct: 196 TKNVLRFLRFPTNYPNYLKEPLGNIHNLIQHRQLLQGVDFSLDDDVRLYTGYAFQSSPHR 255

Query: 206 HYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKK 265
           HY SKWY+SL EYPYH+WP YV+ G+Y++S   L+D Y+AS +TKHFRFDDIY+GILA K
Sbjct: 256 HYISKWYVSLDEYPYHMWPAYVSGGAYILSNAALVDMYYASLYTKHFRFDDIYVGILAYK 315

Query: 266 TNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA 316
              EPFH  EF+FYK+ YS   Y YV+ASHGY N  EL+ VWNEQ+ IGNA
Sbjct: 316 AKIEPFHSEEFHFYKRSYSRKGYDYVVASHGYSNTQELVAVWNEQKSIGNA 366

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312370937|gb|EFR19234.1| hypothetical protein AND_22842 [Anopheles darlingi]

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 174/344 (50%), Positives = 226/344 (65%), Gaps = 38/344 (11%)

Query: 11  KHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGY 70
           +H Q  + +PIN YNY +I+ CE KC   +     R+V+IVKSA+ HF+RR AIR+SWGY
Sbjct: 58  RHGQQPARQPINRYNYTYITSCEHKCKEDDRLMAPRLVFIVKSAIEHFDRRAAIRKSWGY 117

Query: 71  EKRFSDVPIVTVFILGYDP--DNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGF 128
           E+RF+DV I TVF+LG      N  LQ  +  E   Y DIVQ  F+D YFNNTIKTMMGF
Sbjct: 118 ERRFADVKIRTVFMLGRSRIVPNRRLQSLVDLEYSTYRDIVQGDFVDEYFNNTIKTMMGF 177

Query: 129 KWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLE------------------ 170
           +WA  YC  +KFY FADDDFYVS +N+LR++RNP+ YP+YLE                  
Sbjct: 178 RWAVTYCPRAKFYMFADDDFYVSAKNLLRYVRNPVNYPEYLEETDEALRKLARRLAHTTE 237

Query: 171 -----------LPIETI-----QSKSNIM-DYELPSDVKLFSGFVFVSSPHRHYTSKWYI 213
                      LP  T+     ++K  +M D ELP +VKLFSGFVF S+PHRH +SKWY+
Sbjct: 238 RNGTADQSVSPLPTGTVAVAKDRTKRQLMQDMELPPNVKLFSGFVFRSAPHRHRSSKWYV 297

Query: 214 SLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHC 273
           SL+EYP+ +WP YVTAG++++S E L + Y+ S +TKHFRFDDI+LGI+A K   EP H 
Sbjct: 298 SLEEYPWDMWPTYVTAGAFLLSHEALFEMYYVSMYTKHFRFDDIFLGIVAMKAGIEPLHS 357

Query: 274 GEFYFYKKDY-SLHNYQYVIASHGYGNHDELLRVWNEQRGIGNA 316
            EFYF+K  Y    +Y+YV+A+HGY +  E+ +VWNE R  G A
Sbjct: 358 EEFYFHKAPYLGPQSYKYVLATHGYDDLTEMTKVWNEVRASGYA 401

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|290562473|gb|ADD38632.1| Beta-1,3-galactosyltransferase brn [Lepeophtheirus salmonis]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/315 (55%), Positives = 220/315 (69%), Gaps = 27/315 (8%)

Query: 21  INNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIV 80
           IN+++  +I   + KC      +QIRVVYIVKSA+ +  RR  IR++WGYEKRFSDV I 
Sbjct: 63  INSHDTTYIINPKTKCI---HDDQIRVVYIVKSAISNVYRRQVIRKTWGYEKRFSDVTIK 119

Query: 81  TVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKF 140
           TVF LG   D     + ++EES +Y DI+Q  FID+Y+NNTIKT MG KW A YC  ++F
Sbjct: 120 TVFTLGLSKD-----VSVSEESSKYGDIIQGNFIDNYYNNTIKTKMGLKWTALYCNKARF 174

Query: 141 YFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSN-----------------IM 183
           Y F DDD+Y+STRNVLRFLRNPL YP+YLE       S  N                 ++
Sbjct: 175 YLFVDDDYYISTRNVLRFLRNPLNYPKYLEEEFSMTLSFENDPNDGGVGHSHRRNLKQLI 234

Query: 184 DYELPSDVKLFSGFVF-VSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDF 242
           +Y++P DVKL++G+VF  SSPHRH  S+WYISLQEYPYH WPPYVT G+YV+++E L+DF
Sbjct: 235 EYDIPKDVKLYAGYVFPSSSPHRHRFSRWYISLQEYPYHRWPPYVTGGAYVLTKEALMDF 294

Query: 243 YFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSL-HNYQYVIASHGYGNHD 301
           Y+ S F + FRFDDIYLGILAKK +  PFH  EFYF KK YS   +Y YV+ASHGY + D
Sbjct: 295 YYGSFFVQPFRFDDIYLGILAKKLDIPPFHSEEFYFNKKYYSQPKDYLYVVASHGYSDPD 354

Query: 302 ELLRVWNEQRGIGNA 316
           ELL+ WN+Q+ IGNA
Sbjct: 355 ELLKFWNKQKEIGNA 369

Source: Lepeophtheirus salmonis

Species: Lepeophtheirus salmonis

Genus: Lepeophtheirus

Family: Caligidae

Order: Siphonostomatoida

Class: Maxillopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
FB|FBgn0000221	325	brn "brainiac" [Drosophila mel	0.392	0.381	0.496	6.9e-61
UNIPROTKB|E1C4T5	326	B3GALT1 "Uncharacterized prote	0.458	0.444	0.36	1.4e-40
UNIPROTKB|F1PGN6	326	B3GALT1 "Uncharacterized prote	0.458	0.444	0.353	2.8e-40
UNIPROTKB|Q9Y5Z6	326	B3GALT1 "Beta-1,3-galactosyltr	0.458	0.444	0.353	2.8e-40
UNIPROTKB|F1S1X0	326	B3GALT1 "Uncharacterized prote	0.458	0.444	0.353	2.8e-40
MGI|MGI:1349403	326	B3galt1 "UDP-Gal:betaGlcNAc be	0.458	0.444	0.353	2.8e-40
RGD|1311898	326	B3galt1 "UDP-Gal:betaGlcNAc be	0.458	0.444	0.353	2.8e-40
UNIPROTKB|F1N0D5	326	B3GALT1 "Uncharacterized prote	0.458	0.444	0.353	4.6e-40
ZFIN|ZDB-GENE-120215-203	328	si:dkey-276l13.6 "si:dkey-276l	0.458	0.442	0.333	1.1e-38
MGI|MGI:1349461	422	B3galt2 "UDP-Gal:betaGlcNAc be	0.506	0.379	0.337	3e-36

FB|FBgn0000221 brn "brainiac" [Drosophila melanogaster (taxid:7227)]

 Score = 327 (120.2 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 62/125 (49%), Positives = 83/125 (66%)

Query:   193 LFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHF 252
             LF+G VF +SP RH  SKWY+SL+EYP+  WPPYVTAG++++S++ L   Y AS     F
Sbjct:   201 LFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLF 260

Query:   253 RFDDIYLGILAKKTNTEPFHCGEFYFYKKDYS-LHNYQYVIASHGYGNHDELLRVWNEQR 311
             RFDD+YLGI+A K      HC +F F++  Y    +Y  VIASH +G+ +E+ RVWNE R
Sbjct:   261 RFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMTRVWNECR 320

Query:   312 GIGNA 316
                 A
Sbjct:   321 SANYA 325

GO:0005576 "extracellular region" evidence=ISS

GO:0007293 "germarium-derived egg chamber formation" evidence=IMP

GO:0042248 "maintenance of polarity of follicular epithelium" evidence=IMP

GO:0007299 "ovarian follicle cell-cell adhesion" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0016333 "morphogenesis of follicular epithelium" evidence=IMP

GO:0030707 "ovarian follicle cell development" evidence=IMP;TAS

GO:0008375 "acetylglucosaminyltransferase activity" evidence=IDA;TAS

GO:0048477 "oogenesis" evidence=NAS

GO:0008314 "gurken receptor signaling pathway" evidence=NAS

GO:0007219 "Notch signaling pathway" evidence=TAS

GO:0046981 "beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity" evidence=IDA

GO:0006688 "glycosphingolipid biosynthetic process" evidence=IDA;TAS

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0001744 "optic lobe placode formation" evidence=IMP

UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 264 (98.0 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
 Identities = 54/150 (36%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFDFLINEPNKC----EKSVPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A YC  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATYCSK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPNTKPR 199

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

UNIPROTKB|F1PGN6 B3GALT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 260 (96.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 53/150 (35%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFEFLINEPNKC----EKSIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|Q9Y5Z6 B3GALT1 "Beta-1,3-galactosyltransferase 1" [Homo sapiens (taxid:9606)]

 Score = 260 (96.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 53/150 (35%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IDA

GO:0016021 "integral to membrane" evidence=NAS

GO:0006486 "protein glycosylation" evidence=IEA;IDA

GO:0030259 "lipid glycosylation" evidence=NAS

UNIPROTKB|F1S1X0 B3GALT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 260 (96.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 53/150 (35%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

MGI|MGI:1349403 B3galt1 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1" [Mus musculus (taxid:10090)]

 Score = 260 (96.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 53/150 (35%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006486 "protein glycosylation" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISO;IDA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1311898 B3galt1 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1" [Rattus norvegicus (taxid:10116)]

 Score = 260 (96.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 53/150 (35%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFEFLINEPNKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

GO:0000139 "Golgi membrane" evidence=IEA;ISO

GO:0006486 "protein glycosylation" evidence=IEA;ISO

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA;ISO

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 258 (95.9 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 53/150 (35%), Positives = 87/150 (58%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TRPIN +++ F+     KC    EK    +V ++ +  + F+ R AIR++WG E  F  +
Sbjct:    55 TRPINPHSFEFLINEPTKC----EKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGI 110

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I T+F+LG + D    Q+ + +ES+ ++DI+   FIDSY N T+KT+MG +W A +C  
Sbjct:   111 KIATLFLLGKNADPVLNQM-VEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCAK 169

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +K+    D D +V+  N++  L  P   P+
Sbjct:   170 AKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

ZFIN|ZDB-GENE-120215-203 si:dkey-276l13.6 "si:dkey-276l13.6" [Danio rerio (taxid:7955)]

 Score = 245 (91.3 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
 Identities = 50/150 (33%), Positives = 90/150 (60%)

Query:    18 TRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDV 77
             TR +N +N+ F+    +KC    E     +V ++ +  + F+ R AIR++WG E  FS+V
Sbjct:    57 TRTLNPHNFKFLINEPKKC----ESTTPFLVLLISTNHKEFDARQAIRETWGDENTFSNV 112

Query:    78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH 137
              I+T+F+LGY  +    Q+ + +ES+ ++DI+   F+DSY N T+KT+MG +W + +C +
Sbjct:   113 HILTLFLLGYSTEPVLNQM-VEQESQIFHDILVEDFVDSYHNLTLKTLMGMRWVSLFCPN 171

Query:   138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQ 167
             +++    D D +V+  N++  L  P   P+
Sbjct:   172 AQYVMKTDSDIFVNMDNLVFNLLRPNAKPR 201

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

MGI|MGI:1349461 B3galt2 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2" [Mus musculus (taxid:10090)]

 Score = 258 (95.9 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
 Identities = 56/166 (33%), Positives = 91/166 (54%)

Query:     4 TACVEGYKHDQPCSTRPINNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLA 63
             T    G  +++  +  P N+Y++ +I    +KC    EK    ++ ++ +     E R A
Sbjct:   115 TLSANGSIYNEKGTGHP-NSYHFKYIINEPEKC---QEKSPF-LILLIAAEPGQIEARRA 169

Query:    64 IRQSWGYEKRFSDVPIVTVFILGYDPDNEG-LQIEIAEESERYNDIVQAKFIDSYFNNTI 122
             IRQ+WG E     + I+ VF+LG      G LQ  I EES +Y+DI+Q +++D+Y+N TI
Sbjct:   170 IRQTWGNETLAPGIQIIRVFLLGISIKLNGYLQHAIQEESRQYHDIIQQEYLDTYYNLTI 229

Query:   123 KTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQY 168
             KT+MG  W A YC H+ +    D D +V+T  ++  L  P   P++
Sbjct:   230 KTLMGMNWVATYCPHTPYVMKTDSDMFVNTEYLIHKLLKPDLPPRH 275

GO:0005575 "cellular_component" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IDA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Y5Z6	B3GT1_HUMAN	2, ., 4, ., 1, ., -	0.3105	0.8354	0.8098	yes	N/A
O54904	B3GT1_MOUSE	2, ., 4, ., 1, ., -	0.3105	0.8354	0.8098	yes	N/A
Q95US5	BRE5_CAEEL	2, ., 4, ., 1, ., -	0.3359	0.7088	0.6956	yes	N/A
Q7JK26	B3GT1_PANTR	2, ., 4, ., 1, ., -	0.3105	0.8354	0.8098	yes	N/A
Q24157	BRN_DROME	2, ., 4, ., 1, ., 6, 2	0.4644	0.7626	0.7415	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.766
4th Layer	2.4.1.62	0.824

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	316
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	2e-41
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	6e-13

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  142 bits (360), Expect = 2e-41
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)

Query: 59  ERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEG-LQIEIAEESERYNDIVQAKFIDSY 117
            RR AIR++W  +       I ++F++G   D +G ++  + EE++ Y DIV   F D+Y
Sbjct: 1   ARRNAIRKTWMNKGNSEGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTY 60

Query: 118 FNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQ 177
            N T KT+ G  +A +    +K+    DDD Y     +L  L      P         ++
Sbjct: 61  ENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINPSESSFYGYVMK 120

Query: 178 SKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSRE 237
               I                      R+  SKWY+   +YP   +PPY +   Y++SR+
Sbjct: 121 EGPVI----------------------RNKKSKWYVPPSDYPCSRYPPYASGPFYLLSRD 158

Query: 238 VLLDFYFASHFTKHFRFDDIYL-GILAKKTNTEPFHC 273
                  AS   +  + +D+Y+ GILA          
Sbjct: 159 AAELLLKASKHRRFLQIEDVYVTGILADDLGISRVDL 195

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score = 68.7 bits (168), Expect = 6e-13
 Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 59/281 (20%)

Query: 51  VKSALRHFERRLAIRQSWGYEKRFSDVPIVTV---FILGYDPDNEGLQIEIAEESERYND 107
           V S   +F+RR+A+R++W    ++  V    V   F +G    N+ +  E+  E+  Y D
Sbjct: 391 VFSTANNFKRRMAVRRTW---MQYDAVRSGAVAVRFFVGLH-KNQMVNEELWNEARTYGD 446

Query: 108 IVQAKFIDSYFNNTIKT----MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPL 163
           I    F+D Y   T KT    + G +  +     +K+    DDD +V    VL  L    
Sbjct: 447 IQLMPFVDYYSLITWKTLAICIFGTEVVS-----AKYVMKTDDDAFVRVDEVLASL---- 497

Query: 164 QYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLW 223
                          ++N+      S   L+      S PHR+  SKWYIS +E+P   +
Sbjct: 498 --------------KRTNV------SHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETY 537

Query: 224 PPYVTAGSYVVSREVLLDFY--FASHFTKHFRFDDIYLGIL---AKKTNTEPFHCGEFYF 278
           PP+     YVVSR++  + Y        K F+ +D+ +GI     KK   E         
Sbjct: 538 PPWAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEV-------K 590

Query: 279 YKKDYSLHNYQ----YVIASHGYGNHDELLRVWNE-QRGIG 314
           Y+ D  ++N      YV+A H Y +  E+L +W + Q G  
Sbjct: 591 YENDGRIYNEGCKDGYVVA-H-YQSPREMLCLWQKLQEGKR 629

Length = 636

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
KOG2287|consensus	349		100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288|consensus	274		100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.86
KOG2246|consensus	364		99.68
PLN03153	537	hypothetical protein; Provisional	99.44
KOG3708|consensus	681		98.18
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	96.13
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	95.97
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	95.58
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	95.46
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	95.39
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	95.0
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	94.97
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	94.46
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	94.36
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	94.3
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	94.18
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	94.09
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	93.92
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	93.78
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	93.77
PRK11204	420	N-glycosyltransferase; Provisional	93.69
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	93.64
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	93.52
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	93.32
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	93.22
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	92.85
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	92.15
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	91.55
COG1216	305	Predicted glycosyltransferases [General function p	91.55
PRK14583	444	hmsR N-glycosyltransferase; Provisional	91.48
PF05679	499	CHGN: Chondroitin N-acetylgalactosaminyltransferas	90.51
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	90.24
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	90.16
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	89.91
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	88.58
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	86.42
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	85.09
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	84.9
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	84.57
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	82.57
cd06438	183	EpsO_like EpsO protein participates in the methano	82.31
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	81.49
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	80.8
COG1215	439	Glycosyltransferases, probably involved in cell wa	80.49
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	80.27

>KOG2287|consensus

Probab=100.00  E-value=1e-60  Score=454.72  Aligned_cols=264  Identities=28%  Similarity=0.560  Sum_probs=235.9

Q ss_pred             CCCCccccccCcccccccCCCCCeeEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHH
Q psy14347         22 NNYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEE  101 (316)
Q Consensus        22 n~~~~~~l~~~~~~C~~~~~~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E  101 (316)
                      +...+.+++..++.|...   ..++++++|+|+++|++||++||+|||+...+.+.+++.+|++|.+.+.+.++..|.+|
T Consensus        75 ~~~~~~~~l~~p~~~~~~---~~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~E  151 (349)
T KOG2287|consen   75 DFQKFFYLLYLPEICDPD---RPPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADE  151 (349)
T ss_pred             hhccChhhhcCChhhcCC---CCceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHH
Confidence            333444445545566652   25899999999999999999999999999988888999999999987322568899999


Q ss_pred             HHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhcccc
Q psy14347        102 SERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSN  181 (316)
Q Consensus       102 ~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~  181 (316)
                      ++.||||||+||.|+|.|+|+|++++++|+.++||+++|++|+|||+|||+++|+.+|....                  
T Consensus       152 a~~ygDIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~------------------  213 (349)
T KOG2287|consen  152 ARLYGDIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLN------------------  213 (349)
T ss_pred             HHHhCCEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccC------------------
Confidence            99999999999999999999999999999999999999999999999999999999998752                  


Q ss_pred             ccccCCCCCcceEEEEeec-CcCccCCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHH
Q psy14347        182 IMDYELPSDVKLFSGFVFV-SSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLG  260 (316)
Q Consensus       182 ~~~~~~~~~~~ly~G~~~~-~~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~G  260 (316)
                            ++...+|.|++.. ..|+|++.+|||||+++||...|||||+|+||++|+++|+.|++++.+.+.+++|||++|
T Consensus       214 ------~~~~~~~~G~v~~~~~p~R~~~~KwyVp~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g  287 (349)
T KOG2287|consen  214 ------DPSSDLYYGRVIQNAPPIRDKTSKWYVPESEYPCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVG  287 (349)
T ss_pred             ------CCCcceEEEeecccCCCCCCCCCCCccCHHHCCCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHH
Confidence                  2567899999995 599999999999999999999999999999999999999999999999999999999998


Q ss_pred             HhhHHc-CCceeecCCceecCCCCCccccceeEEEeccCChHHHHHHHHHHHhc
Q psy14347        261 ILAKKT-NTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGI  313 (316)
Q Consensus       261 i~~~k~-gi~~~~~~~f~~~~~~~~~c~~~~~i~~H~~~~p~~m~~~W~~~~~~  313 (316)
                      +|+.+. ||.+.+++++......+++|+++.++++|..+ |.+|..+|+.+++.
T Consensus       288 ~~l~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-p~e~~~~w~~~~~~  340 (349)
T KOG2287|consen  288 GCLAEDLGIKPVNHPGFFEIPLSFDPCCYRDLLAVHRLS-PNEMIYLWKKLKDL  340 (349)
T ss_pred             HHHHHhcCCCcccCcccccccccCCCCcccceEEEecCC-HHHHHHHHHHhhcc
Confidence            887776 99999999876666666899999999999986 99999999999883

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=3.2e-58  Score=457.74  Aligned_cols=271  Identities=24%  Similarity=0.345  Sum_probs=225.9

Q ss_pred             HHhhccCCCCccCCC-CCCccccccCcccccccCCCCCeeEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEec
Q psy14347          8 EGYKHDQPCSTRPIN-NYNYPFISKCEQKCAAYNEKEQIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILG   86 (316)
Q Consensus         8 ~~~~~~~~~~~~~~n-~~~~~~l~~~~~~C~~~~~~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG   86 (316)
                      +.+.+...|.+.|.. ..++.-+..|  .|+.   .++++|+|+|+|+|+|++||++||+|||+.....+..++++|+||
T Consensus       352 ~SV~a~~~p~~~~~~~~~d~e~lkAp--pL~~---~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG  426 (636)
T PLN03133        352 ISVLASGLPTSEDSEHVIDLEALKSP--PLSP---KKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVG  426 (636)
T ss_pred             EEEEeeCCCCCCchhcccchHHhcCC--CCCC---CCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEe
Confidence            344555555555431 1134445554  3654   247899999999999999999999999997665566789999999


Q ss_pred             CCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCC
Q psy14347         87 YDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYP  166 (316)
Q Consensus        87 ~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~  166 (316)
                      .+. ++.++..|.+|+++||||||+||.|+|+|||+|+++++.|+. +|++++|++|+|||+|||+++|+++|....   
T Consensus       427 ~s~-n~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~-~c~~akFilK~DDDvFVnv~~Ll~~L~~~~---  501 (636)
T PLN03133        427 LHK-NQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGT-EVVSAKYVMKTDDDAFVRVDEVLASLKRTN---  501 (636)
T ss_pred             cCC-cHHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHH-hCCCceEEEEcCCceEEcHHHHHHHHHhcC---
Confidence            987 788899999999999999999999999999999999999985 588999999999999999999999997532   


Q ss_pred             cccccchhhhhccccccccCCCCCcceEEEEee-cCcCccCCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHH
Q psy14347        167 QYLELPIETIQSKSNIMDYELPSDVKLFSGFVF-VSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFA  245 (316)
Q Consensus       167 ~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~-~~~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~  245 (316)
                                            ....+|.|++. +..|+|++.+|||||.++||.+.|||||+|+|||||+++|+.|+.+
T Consensus       502 ----------------------~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~~~  559 (636)
T PLN03133        502 ----------------------VSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKR  559 (636)
T ss_pred             ----------------------CCCceEEEEeccCCCcccCCCCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHHHh
Confidence                                  34568999998 5589999999999999999999999999999999999999999987


Q ss_pred             h--ccCCCCCCCchHHHHhhH---HcCCceeecCCceecCCCCCccccceeEEEeccCChHHHHHHHHHHHhccC
Q psy14347        246 S--HFTKHFRFDDIYLGILAK---KTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYGNHDELLRVWNEQRGIGN  315 (316)
Q Consensus       246 s--~~~~~~~~eDv~~Gi~~~---k~gi~~~~~~~f~~~~~~~~~c~~~~~i~~H~~~~p~~m~~~W~~~~~~~~  315 (316)
                      +  ..++.|++||||+|+|+.   ++|+++.+...+.+.   .+.|.. ..|++|+. +|.+|.++|+.++..++
T Consensus       560 s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~---~~~C~~-~~i~~H~~-sP~eM~~lW~~l~~~~~  629 (636)
T PLN03133        560 HKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIY---NEGCKD-GYVVAHYQ-SPREMLCLWQKLQEGKR  629 (636)
T ss_pred             hhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCccc---CCcCCC-CeEEEecC-CHHHHHHHHHHHhccCC
Confidence            5  478999999999999975   467777665444332   257875 56789987 69999999999987754

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=1.7e-53  Score=374.84  Aligned_cols=194  Identities=40%  Similarity=0.785  Sum_probs=176.6

Q ss_pred             HHHHHHHHHhcCCcCCCCcCEEEEEEecCCC-CChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCC
Q psy14347         59 ERRLAIRQSWGYEKRFSDVPIVTVFILGYDP-DNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKH  137 (316)
Q Consensus        59 ~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~-~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~  137 (316)
                      +||++||+|||+.....+.+++++|++|.+. .++.++..|.+|+++|+||||+||.|+|+|+|+|++++++|+.++||+
T Consensus         1 ~rR~~IR~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~   80 (195)
T PF01762_consen    1 ERRQAIRETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHCPN   80 (195)
T ss_pred             ChHHHHHHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhCCc
Confidence            5899999999999877788999999999987 467788889999999999999999999999999999999999999999


Q ss_pred             ccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCccccccC
Q psy14347        138 SKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQE  217 (316)
Q Consensus       138 ~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~~~  217 (316)
                      ++|++|+|||+|||+++|.++|.....                      ......+++|....+.|+|++.+|||+|.++
T Consensus        81 ~~~v~k~DDD~~vn~~~l~~~L~~~~~----------------------~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~  138 (195)
T PF01762_consen   81 AKYVLKVDDDVFVNPDRLVSFLKSLKQ----------------------DPSKNSIYGGCIKNGPPIRDPSSKWYVSEEE  138 (195)
T ss_pred             hhheeecCcEEEEehHHhhhhhhhccc----------------------CccccccccccccCCccccccccCceeeeee
Confidence            999999999999999999999987511                      0133456655555668999999999999999


Q ss_pred             CCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347        218 YPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG  274 (316)
Q Consensus       218 y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~  274 (316)
                      ||.+.|||||+|+||+||+++++.|+.++..++.+++|||++|+|+.++||++.|+|
T Consensus       139 y~~~~yP~y~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  139 YPDDYYPPYCSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             cccccCCCcCCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCccCCC
Confidence            999999999999999999999999999999999999999999999999999998865

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=1e-51  Score=390.58  Aligned_cols=218  Identities=17%  Similarity=0.223  Sum_probs=191.2

Q ss_pred             CCeeEEEEEEcCCCCHHHHHHHHHHhcCCcCC-----CCcCEEEEEEecCCCC-ChhHHHHHHHHHHHCCCEEEeeeccC
Q psy14347         43 EQIRVVYIVKSALRHFERRLAIRQSWGYEKRF-----SDVPIVTVFILGYDPD-NEGLQIEIAEESERYNDIVQAKFIDS  116 (316)
Q Consensus        43 ~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~-----~~~~v~~vFvlG~~~~-~~~~~~~l~~E~~~~~DIl~~d~~Ds  116 (316)
                      +++.++|+|.|+++|++||++||+|||+....     ...+++++|++|++.+ +...+..|++|+++|||||++||.|+
T Consensus       137 ~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDs  216 (408)
T PLN03193        137 RRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEG  216 (408)
T ss_pred             ceEEEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccc
Confidence            57999999999999999999999999986432     2356899999999763 46788899999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEE
Q psy14347        117 YFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSG  196 (316)
Q Consensus       117 Y~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G  196 (316)
                      |.|||+||+++|+|+.++| +++||+|+|||+|||+++|+.+|....                         ...++|.|
T Consensus       217 Y~NLT~KTl~~f~wA~~~~-dAkF~mK~DDDvfVnv~~L~~~L~~~~-------------------------~~~rlYiG  270 (408)
T PLN03193        217 YLELSAKTKTYFATAVAMW-DADFYVKVDDDVHVNIATLGETLVRHR-------------------------KKPRVYIG  270 (408)
T ss_pred             cccchHHHHHHHHHHHHcC-CCeEEEEcCCCceEcHHHHHHHHHhcC-------------------------CCCCEEEE
Confidence            9999999999999999987 899999999999999999999997531                         23469999


Q ss_pred             EeecCcCccCCCCCccccccCC----CCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceee
Q psy14347        197 FVFVSSPHRHYTSKWYISLQEY----PYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFH  272 (316)
Q Consensus       197 ~~~~~~p~r~~~~Kw~v~~~~y----~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~  272 (316)
                      ++.. .|+|++.++||++.+.|    +.+.|||||+|+|||||+++|+.|+.++..++.+++|||++|+|+..++|+.+|
T Consensus       271 ~m~~-gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L~~y~~EDV~vG~Wl~~L~V~~vd  349 (408)
T PLN03193        271 CMKS-GPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHID  349 (408)
T ss_pred             eccc-CccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHHhChhhhcccCcchhhhhhHhccCCceeee
Confidence            9975 58888777777777777    668999999999999999999999988888888999999999999999999999


Q ss_pred             cCCceecCCCCCccccc
Q psy14347        273 CGEFYFYKKDYSLHNYQ  289 (316)
Q Consensus       273 ~~~f~~~~~~~~~c~~~  289 (316)
                      +++|.....  ..|..+
T Consensus       350 d~~fcc~~~--~~C~~~  364 (408)
T PLN03193        350 DRRLCCGTP--PDCEWK  364 (408)
T ss_pred             cccccCCCC--cccccc
Confidence            999976522  356554

>KOG2288|consensus

Probab=100.00  E-value=1.9e-37  Score=273.85  Aligned_cols=210  Identities=20%  Similarity=0.279  Sum_probs=184.7

Q ss_pred             CCeeEEEEEEcCCCCHHHHHHHHHHhcCCc-----CCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEee-eccC
Q psy14347         43 EQIRVVYIVKSALRHFERRLAIRQSWGYEK-----RFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAK-FIDS  116 (316)
Q Consensus        43 ~~~~lli~V~S~~~~~~rR~~IR~TW~~~~-----~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d-~~Ds  116 (316)
                      .++.++|+|.|++++.+||+.+|+||+...     .-....+.++|++|..........+|++|.++|+|.+.+| ..|.
T Consensus         9 ~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~~~~~DfllLd~h~E~   88 (274)
T KOG2288|consen    9 RKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTATLGASLDRALEEENAQHGDFLLLDRHEEA   88 (274)
T ss_pred             cceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCCccHHHHHHHHHHHHhcCCeEeechhHHH
Confidence            478999999999999999999999999872     1234578899999994437788999999999999999999 9999


Q ss_pred             CCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEE
Q psy14347        117 YFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSG  196 (316)
Q Consensus       117 Y~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G  196 (316)
                      |.+|+.||+++|.++..++ +++|++|+|||+|||++.|...|...                         .....+|+|
T Consensus        89 Y~~Ls~Kt~~~f~~A~~~~-daeFyvKvDDDv~v~l~~L~~~la~~-------------------------r~~pr~YiG  142 (274)
T KOG2288|consen   89 YEELSAKTKAFFSAAVAHW-DAEFYVKVDDDVYVRLARLGTLLARE-------------------------RSHPRLYIG  142 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhc-cceEEEEccccceecHHHHHHHHHhh-------------------------ccCCceEEE
Confidence            9999999999999999998 99999999999999999999988763                         244789999


Q ss_pred             EeecCcCccCCCCCccccccCCCC-CCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecCC
Q psy14347        197 FVFVSSPHRHYTSKWYISLQEYPY-HLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGE  275 (316)
Q Consensus       197 ~~~~~~p~r~~~~Kw~v~~~~y~~-~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~~  275 (316)
                      ++..+..+-++.+||+-|++-+.. +.|.+|+.|++|+||++++..|..+......+..|||.+|.|+.-++|+.+|.++
T Consensus       143 cmksg~v~~~~~~kw~EpeWkfg~~g~YfrhA~G~~YvlS~dLa~yi~in~~lL~~y~nEDVSlGaW~~gldV~h~dd~r  222 (274)
T KOG2288|consen  143 CMKSGPVLTQPGGKWYEPEWKFGDNGNYFRHATGGGYVLSKDLATYISINRQLLHKYANEDVSLGAWMIGLDVEHVDDPR  222 (274)
T ss_pred             EecCCccccCCCCcccChhhhcCcccccchhccCceEEeeHHHHHHHHHhHHHHHhhccCCcccceeeeeeeeeEecCCc
Confidence            998776677789999999833332 1399999999999999999999998888888999999999999999999999887


Q ss_pred             cee
Q psy14347        276 FYF  278 (316)
Q Consensus       276 f~~  278 (316)
                      +..
T Consensus       223 lC~  225 (274)
T KOG2288|consen  223 LCC  225 (274)
T ss_pred             ccc
Confidence            754

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=100.00  E-value=2e-34  Score=269.41  Aligned_cols=223  Identities=17%  Similarity=0.150  Sum_probs=175.3

Q ss_pred             CCeeEEEEEEcCCCC--HHHHHHHHHHhcCCcC-------CCCcCEEEEEEecCCCC-ChhHHHHHHHHHHHCCCEEEee
Q psy14347         43 EQIRVVYIVKSALRH--FERRLAIRQSWGYEKR-------FSDVPIVTVFILGYDPD-NEGLQIEIAEESERYNDIVQAK  112 (316)
Q Consensus        43 ~~~~lli~V~S~~~~--~~rR~~IR~TW~~~~~-------~~~~~v~~vFvlG~~~~-~~~~~~~l~~E~~~~~DIl~~d  112 (316)
                      +.-.++++|.|..++  +.||++.|+||.+-..       +.| .+-++|+||..++ +-+.+++|.+|+++|||||+++
T Consensus        78 ~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg-~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVilp  156 (382)
T PTZ00210         78 QRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSG-SLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITLP  156 (382)
T ss_pred             CCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCch-hhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEEe
Confidence            567788999999888  9999999999997643       334 3678899999772 3388899999999999999999


Q ss_pred             e------------------ccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchh
Q psy14347        113 F------------------IDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIE  174 (316)
Q Consensus       113 ~------------------~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~  174 (316)
                      |                  .|++.|+|+||+++++|+...||+++|++|+|||+|||+++++++|+..            
T Consensus       157 f~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~------------  224 (382)
T PTZ00210        157 TNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVM------------  224 (382)
T ss_pred             cccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhC------------
Confidence            9                  7788899999999999999999999999999999999999999999753            


Q ss_pred             hhhccccccccCCCCCcceEEEEeecC-cCccCCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhc--cC--
Q psy14347        175 TIQSKSNIMDYELPSDVKLFSGFVFVS-SPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASH--FT--  249 (316)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~ly~G~~~~~-~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~--~~--  249 (316)
                                    ++..+|.|.+... .|.|++               +||||+|+||+||+++|+.|+....  +.  
T Consensus       225 --------------prr~LY~G~v~~~~~p~Rd~---------------~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~  275 (382)
T PTZ00210        225 --------------PRHGLYMGRYNYYNRIWRRN---------------QLTYVNGYCITLSRDTAQAIISYKPLERLVN  275 (382)
T ss_pred             --------------CCCceEEEeeCCCCccccCC---------------CCCccccceeeccHHHHHHHHhhChHhHhhc
Confidence                          4456999998743 555542               4999999999999999999998732  22  


Q ss_pred             -C------------CCCCCchHHHHhh-HHcCCcee-----ecCCceecCCCCCccc---cceeEEEeccCChHHHHHHH
Q psy14347        250 -K------------HFRFDDIYLGILA-KKTNTEPF-----HCGEFYFYKKDYSLHN---YQYVIASHGYGNHDELLRVW  307 (316)
Q Consensus       250 -~------------~~~~eDv~~Gi~~-~k~gi~~~-----~~~~f~~~~~~~~~c~---~~~~i~~H~~~~p~~m~~~W  307 (316)
                       |            .+..||+.+|.++ .+++.++.     ...+|+....  ..|.   ....+.+|+++ +++-..+.
T Consensus       276 ~pys~~~~~~y~~~~~~~EDiMvG~vLr~~~k~~~l~~V~~~~c~Fhd~~~--~~~~~~v~~~sVvvHhik-e~dYa~Lm  352 (382)
T PTZ00210        276 MPFSMWDYFDFLDLGMFYEDVMVGMILREKVVYRNLISVEMGRCHFHNAGK--FGVRKSVRNMSVVIHHIQ-EADYEMLM  352 (382)
T ss_pred             CCCchHHHHHHHHhhcCchHHHHHHHHHHhcCcCceeeeccccccceecCC--CCCccccccceEEEEecC-HHHHHHHH
Confidence             2            2568999999987 55554432     2334543322  2232   35789999996 77766665


Q ss_pred             HHH
Q psy14347        308 NEQ  310 (316)
Q Consensus       308 ~~~  310 (316)
                      ..+
T Consensus       353 ~~F  355 (382)
T PTZ00210        353 DYF  355 (382)
T ss_pred             HHh
Confidence            554

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.86  E-value=1.5e-21  Score=178.39  Aligned_cols=212  Identities=19%  Similarity=0.250  Sum_probs=110.4

Q ss_pred             eEEEEEEcCCCCHHHH-HHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHH
Q psy14347         46 RVVYIVKSALRHFERR-LAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKT  124 (316)
Q Consensus        46 ~lli~V~S~~~~~~rR-~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~  124 (316)
                      +++|+|+|++.+.+.| .+|++||++.+.  .    .+|+..... ++.    |..+  .-.+++..+....+...+++.
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~--~----~~~ifsd~~-d~~----l~~~--~~~~l~~~~~~~~~~~~~~~~   73 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCN--K----QTFIFSDAE-DPS----LPTV--TGVHLVNPNCDAGHCRKTLSC   73 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSG--G----GEEEEESS---HH----HHHH--HGGGEEE-------------H
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcC--C----ceEEecCcc-ccc----cccc--cccccccCCCcchhhHHHHHH
Confidence            6899999999888777 899999999875  2    245433222 333    3322  334566666555555555666


Q ss_pred             HHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCc
Q psy14347        125 MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPH  204 (316)
Q Consensus       125 ~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~  204 (316)
                      ++++.+-...-++.+|++++|||+||++++|.++|...                         +++.++|+|......|.
T Consensus        74 ~~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~-------------------------~~~~~~yiG~~~~~~~~  128 (252)
T PF02434_consen   74 KMAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKY-------------------------DPSEPIYIGRPSGDRPI  128 (252)
T ss_dssp             HHHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS--------------------------TTS--EEE-EE-----
T ss_pred             HHHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhC-------------------------CCccCEEeeeeccCccc
Confidence            65555544444578999999999999999999999875                         36788999988744443


Q ss_pred             cCCCCCccccccCCCCCCccccc-ccceEEecHHHHHHHHHHhc--cCC-C----CCCCchHHHHhhHH-cCCceeecCC
Q psy14347        205 RHYTSKWYISLQEYPYHLWPPYV-TAGSYVVSREVLLDFYFASH--FTK-H----FRFDDIYLGILAKK-TNTEPFHCGE  275 (316)
Q Consensus       205 r~~~~Kw~v~~~~y~~~~yP~y~-~G~~yvlS~~~~~~l~~~s~--~~~-~----~~~eDv~~Gi~~~k-~gi~~~~~~~  275 (316)
                      .... +  .....-....| .|+ +|+||+||+.++++|.....  ..+ .    -..||+.+|.|++. +||+.++.+.
T Consensus       129 ~~~~-~--~~~~~~~~~~~-~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~  204 (252)
T PF02434_consen  129 EIIH-R--FNPNKSKDSGF-WFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPL  204 (252)
T ss_dssp             ---------------------EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT
T ss_pred             eeec-c--ccccccCcCce-EeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechh
Confidence            2100 0  00000011122 244 67999999999999954332  222 1    23799999999998 9999999999


Q ss_pred             ceecCCC---CCcccc--ceeEEEeccCC
Q psy14347        276 FYFYKKD---YSLHNY--QYVIASHGYGN  299 (316)
Q Consensus       276 f~~~~~~---~~~c~~--~~~i~~H~~~~  299 (316)
                      |+.....   +.+...  +-.|++|...+
T Consensus       205 fhs~~~~l~~~~~~~l~~q~~~s~~~~~~  233 (252)
T PF02434_consen  205 FHSHLENLQDYNPETLHRQVPISYHKFEN  233 (252)
T ss_dssp             ---SSS-GGG--TTTGGG-SEEE-EEETT
T ss_pred             hcccCcccccCCHHHhccCCCeecCCCcC
Confidence            9876543   233322  35688888753

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246|consensus

Probab=99.68  E-value=2.2e-16  Score=150.71  Aligned_cols=169  Identities=20%  Similarity=0.220  Sum_probs=130.6

Q ss_pred             CCCeeEEEEEEcCCCCHHHH-HHHHHHhcCCcCCCCcCEEEEEEe---cCCCCChhHHHHHHHHHHHCCCEEEeeeccCC
Q psy14347         42 KEQIRVVYIVKSALRHFERR-LAIRQSWGYEKRFSDVPIVTVFIL---GYDPDNEGLQIEIAEESERYNDIVQAKFIDSY  117 (316)
Q Consensus        42 ~~~~~lli~V~S~~~~~~rR-~~IR~TW~~~~~~~~~~v~~vFvl---G~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY  117 (316)
                      ..+..++++|+|++.+...| +.+-+||++.+.      +..|+-   ++..  .           .+. .|..+..|+|
T Consensus        88 ~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~------~~~f~s~~~s~~~--~-----------~f~-~v~~~~~~g~  147 (364)
T KOG2246|consen   88 SRSGRVLCWVLTSPMRHVTRADAVKETWLKRCD------KGIFFSPTLSKDD--S-----------RFP-TVYYNLPDGY  147 (364)
T ss_pred             CCCceEEEEEEecCcCceeehhhhhcccccccC------cceecCccCCCCC--C-----------cCc-eeeccCCcch
Confidence            36889999999999888877 699999999886      234553   3322  1           121 3467889999


Q ss_pred             CCchHHHHHHHHHHHH-HCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEE
Q psy14347        118 FNNTIKTMMGFKWAAN-YCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSG  196 (316)
Q Consensus       118 ~Nlt~K~~~~l~w~~~-~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G  196 (316)
                      +++..|+..+++++.+ +-.+++|++|+|||||+.++||..+|...                         ++++++|.|
T Consensus       148 ~~~~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~y-------------------------Dp~~p~YiG  202 (364)
T KOG2246|consen  148 RSLWRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKY-------------------------DPEKPVYLG  202 (364)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhc-------------------------CCCCcEEec
Confidence            9999999999999984 45579999999999999999999999875                         478899999


Q ss_pred             EeecCcCccCCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhccCC----C-C--CCCchHHHHhhHHcCCc
Q psy14347        197 FVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTK----H-F--RFDDIYLGILAKKTNTE  269 (316)
Q Consensus       197 ~~~~~~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~----~-~--~~eDv~~Gi~~~k~gi~  269 (316)
                      +..+.  .-+ .+  |.             -+|+||++|+++.+.+++......    . .  ..||+-+|.|++.+||.
T Consensus       203 ~~~~~--~~~-~~--y~-------------~g~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i~~Cl~~~GV~  264 (364)
T KOG2246|consen  203 YRSKS--YFQ-NG--YS-------------SGGAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRIGRCLAEVGVP  264 (364)
T ss_pred             ccccc--ccc-cc--cc-------------cCCCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHHHHHHHHhCCC
Confidence            86532  111 11  21             168999999999999887654322    1 2  38999999999999999


Q ss_pred             eeec
Q psy14347        270 PFHC  273 (316)
Q Consensus       270 ~~~~  273 (316)
                      +.+.
T Consensus       265 ~~d~  268 (364)
T KOG2246|consen  265 ATDE  268 (364)
T ss_pred             ccCc
Confidence            8753

>PLN03153 hypothetical protein; Provisional

Probab=99.44  E-value=1.4e-12  Score=127.33  Aligned_cols=203  Identities=11%  Similarity=0.054  Sum_probs=126.3

Q ss_pred             eeEEEEEEcCCCCHH-HHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccC---CCC-
Q psy14347         45 IRVVYIVKSALRHFE-RRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDS---YFN-  119 (316)
Q Consensus        45 ~~lli~V~S~~~~~~-rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~Ds---Y~N-  119 (316)
                      -.++++|.++....+ |+..|+.+|..... .    ..||+..... +......|.       - +.+.-..+   |.| 
T Consensus       122 ~hIvF~I~~s~~~w~~R~~yik~wW~p~~~-r----g~v~ld~~~~-~~~~~~~~P-------~-i~is~d~s~f~y~~~  187 (537)
T PLN03153        122 NHIMFGIAGSSQLWKRRKELVRLWWRPNQM-R----GHVWLEEQVS-PEEGDDSLP-------P-IMVSEDTSRFRYTNP  187 (537)
T ss_pred             ccEEEEEEEchhhhhhhhhhhhhhcCcccc-e----eEEEecccCC-CCCCcCCCC-------C-EEeCCCcccccccCC
Confidence            357888998877665 55899999997542 2    3567655433 110000000       0 11111011   333 


Q ss_pred             --chHH--HH-HHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceE
Q psy14347        120 --NTIK--TM-MGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLF  194 (316)
Q Consensus       120 --lt~K--~~-~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly  194 (316)
                        ....  +. +.++-+..+.|+++|++++|||||+.++||++.|...                         +++++.|
T Consensus       188 ~Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~Y-------------------------Dptkp~Y  242 (537)
T PLN03153        188 TGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKY-------------------------DPSEMVY  242 (537)
T ss_pred             CCcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhc-------------------------CCCCCEE
Confidence              2221  11 2333344457899999999999999999999999875                         4678999


Q ss_pred             EEEeecCcCccCCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhc----cCCCCCCCchHHHHhhHHcCCce
Q psy14347        195 SGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASH----FTKHFRFDDIYLGILAKKTNTEP  270 (316)
Q Consensus       195 ~G~~~~~~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~----~~~~~~~eDv~~Gi~~~k~gi~~  270 (316)
                      +|........-   ..+       .   |--.-+|+||+||+.+++.|...-.    ..+...-+|.-+|.|+..+||+.
T Consensus       243 IGs~Se~~~qn---~~f-------~---~~fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~L  309 (537)
T PLN03153        243 VGGPSESHSAN---SYF-------S---HNMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPL  309 (537)
T ss_pred             ecccccccccc---ccc-------c---cccccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCc
Confidence            99765321100   000       0   1112379999999999998876522    22334568888999999999999


Q ss_pred             eecCCceecCCCCCcccc------ceeEEEeccCC
Q psy14347        271 FHCGEFYFYKKDYSLHNY------QYVIASHGYGN  299 (316)
Q Consensus       271 ~~~~~f~~~~~~~~~c~~------~~~i~~H~~~~  299 (316)
                      ++.++|+.....-++..+      ..++++|.++.
T Consensus       310 T~~~gfhQ~D~~Gd~~G~les~p~~P~vSlHH~~~  344 (537)
T PLN03153        310 SREPGFHQWDIRGNAHGLLSSHPIAPFVSIHHVEA  344 (537)
T ss_pred             eecCCccccccCCCcchHhhcCCCCCceeeeeccc
Confidence            999999877543333322      35688887753

>KOG3708|consensus

Probab=98.18  E-value=1.9e-05  Score=77.09  Aligned_cols=198  Identities=14%  Similarity=0.105  Sum_probs=125.9

Q ss_pred             eeEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHH
Q psy14347         45 IRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKT  124 (316)
Q Consensus        45 ~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~  124 (316)
                      -+++++|+|.   ...--+|-+|-+..-.      ++.|+.+.+..+.              |.-+....--|.--..|+
T Consensus        26 Erl~~aVmte---~tlA~a~NrT~ahhvp------rv~~F~~~~~i~~--------------~~a~~~~vs~~d~r~~~~   82 (681)
T KOG3708|consen   26 ERLMAAVMTE---STLALAINRTLAHHVP------RVHLFADSSRIDN--------------DLAQLTNVSPYDLRGQKT   82 (681)
T ss_pred             HHHHHHHHHH---HHHHHHHHHHHHhhcc------eeEEeeccccccc--------------cHhhccccCccccCcccc
Confidence            3567788882   2556678888887643      5667777654111              111222222232223333


Q ss_pred             -HHHHHHHHHHCC-CccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCc
Q psy14347        125 -MMGFKWAANYCK-HSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSS  202 (316)
Q Consensus       125 -~~~l~w~~~~c~-~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~  202 (316)
                       .+.++++.++.. +.+|++-+-|+||||...|++.+...+                         -..++|+|.-..+.
T Consensus        83 ~s~vl~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~hms-------------------------in~dlymGEe~~~g  137 (681)
T KOG3708|consen   83 HSMVLGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMS-------------------------INEDLYMGEEAEDG  137 (681)
T ss_pred             HHHHHHHHHHhhccccceEEEecCcceecHHHHHHHHhhcc-------------------------cccccccchhhhCc
Confidence             456677777654 689999999999999999999887643                         34678988322110


Q ss_pred             CccCCCCCccccccCCCCCCccccc-ccceEEecHHHHHHHHHHhccCC--CCC-CCchHHHHhhHH-cCCceee-cCCc
Q psy14347        203 PHRHYTSKWYISLQEYPYHLWPPYV-TAGSYVVSREVLLDFYFASHFTK--HFR-FDDIYLGILAKK-TNTEPFH-CGEF  276 (316)
Q Consensus       203 p~r~~~~Kw~v~~~~y~~~~yP~y~-~G~~yvlS~~~~~~l~~~s~~~~--~~~-~eDv~~Gi~~~k-~gi~~~~-~~~f  276 (316)
                                       .+.    | .|.||+||+.++.+|-.+-....  ... =+|+++|.|.+. .|+.+.. +.|.
T Consensus       138 -----------------s~r----C~l~~G~LLS~s~l~~lrnnle~C~~~~lsad~d~~lgrCi~~At~v~C~~~hQGv  196 (681)
T KOG3708|consen  138 -----------------SGR----CRLDTGMLLSQSLLHALRNNLEGCRNDILSADPDEWLGRCIQDATGVGCKPLHQGV  196 (681)
T ss_pred             -----------------cCc----cccccceeecHHHHHHHHhhHHHhhcccccCCcHHHHHHHHHHhhcCCccchhhhH
Confidence                             011    5 47899999999999976543332  233 358999999854 6776543 1222


Q ss_pred             ---eecC-CC--------C-CccccceeEEEeccCChHHHHHHHHHHH
Q psy14347        277 ---YFYK-KD--------Y-SLHNYQYVIASHGYGNHDELLRVWNEQR  311 (316)
Q Consensus       277 ---~~~~-~~--------~-~~c~~~~~i~~H~~~~p~~m~~~W~~~~  311 (316)
                         .... .+        + ....++..+|+|.+.+|.+|+++++.+.
T Consensus       197 rq~s~~~dspgr~~~~~e~~~s~aFr~A~tv~pv~~p~d~yrLH~yfs  244 (681)
T KOG3708|consen  197 RQYSEREDSPGRHDSIPEWEGSPAFRSALTVHPVLSPADMYRLHKYFS  244 (681)
T ss_pred             HhhhHhhcCCCccccchhhcCChHHhhhhccCccCCHHHHHHHHHHHH
Confidence               1100 00        0 1234678999999999999999999875

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.13  E-value=0.11  Score=45.25  Aligned_cols=101  Identities=16%  Similarity=0.136  Sum_probs=55.0

Q ss_pred             EEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCC--Ch-hHHHHHHHHHHHCCCEEEeeeccCCCCchHHHH
Q psy14347         49 YIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPD--NE-GLQIEIAEESERYNDIVQAKFIDSYFNNTIKTM  125 (316)
Q Consensus        49 i~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~--~~-~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~  125 (316)
                      |.|.|-+...+||+.+.+.....    +.  ..-|+-|....  +. ........+.....  ..-...-+----.+-.+
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~----~~--~~e~~~Avdg~~l~~~~~~~~~~~~~~~~~--~~~~lt~gEiGC~lSH~   75 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKL----GI--NFEFFDAVDGRDLSEDELFRRYDPELFKKR--YGRPLTPGEIGCALSHI   75 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc----CC--ceEEEEeecccccchHHHHHHhhhhhhhcc--ccccCCcceEeehhhHH
Confidence            46777888899999998887754    22  34455444331  11 11111111111000  00000011111156677


Q ss_pred             HHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHh
Q psy14347        126 MGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLR  160 (316)
Q Consensus       126 ~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~  160 (316)
                      .+++-+.+.  +.++.+-..||+.++.+ +.+.|.
T Consensus        76 ~~w~~~v~~--~~~~~lIlEDDv~~~~~-f~~~l~  107 (200)
T PF01755_consen   76 KAWQRIVDS--GLEYALILEDDVIFDPD-FKEFLE  107 (200)
T ss_pred             HHHHHHHHc--CCCeEEEEecccccccc-HHHHHH
Confidence            788888874  68999999999999864 444443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=95.97  E-value=0.1  Score=45.75  Aligned_cols=188  Identities=13%  Similarity=0.100  Sum_probs=85.3

Q ss_pred             eEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCE--EEeeeccCCCCch--
Q psy14347         46 RVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDI--VQAKFIDSYFNNT--  121 (316)
Q Consensus        46 ~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DI--l~~d~~DsY~Nlt--  121 (316)
                      .+.|+|.+.-+...-++.|+.--...    ...++++++...+. + ...+.+++-.+.+...  -.+..   -.|.-  
T Consensus         2 ~v~Vvip~~~~~~~l~~~l~sl~~~~----~~~~~v~vvd~~~~-~-~~~~~~~~~~~~~~~~~v~vi~~---~~~~g~~   72 (228)
T PF13641_consen    2 RVSVVIPAYNEDDVLRRCLESLLAQD----YPRLEVVVVDDGSD-D-ETAEILRALAARYPRVRVRVIRR---PRNPGPG   72 (228)
T ss_dssp             -EEEE--BSS-HHHHHHHHHHHTTSH----HHTEEEEEEEE-SS-S--GCTTHHHHHHTTGG-GEEEEE-------HHHH
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHcCC----CCCeEEEEEECCCC-h-HHHHHHHHHHHHcCCCceEEeec---CCCCCcc
Confidence            35566666544445555555554332    13456665554433 2 2233455555566543  22221   13332  


Q ss_pred             HHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecC
Q psy14347        122 IKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVS  201 (316)
Q Consensus       122 ~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~  201 (316)
                      .|. .+++++.+.. ..+|++.+|||+.+.++-|...+....                        .+...+..|.+.-.
T Consensus        73 ~k~-~a~n~~~~~~-~~d~i~~lD~D~~~~p~~l~~~~~~~~------------------------~~~~~~v~~~~~~~  126 (228)
T PF13641_consen   73 GKA-RALNEALAAA-RGDYILFLDDDTVLDPDWLERLLAAFA------------------------DPGVGAVGGPVFPD  126 (228)
T ss_dssp             HHH-HHHHHHHHH----SEEEEE-SSEEE-CHHHHHHHHHHH------------------------BSS--EEEEEEEET
T ss_pred             hHH-HHHHHHHHhc-CCCEEEEECCCcEECHHHHHHHHHHHH------------------------hCCCCeEeeeEeec
Confidence            333 3557777776 699999999999999888777665420                        02222333333210


Q ss_pred             cC-------ccCCCCCccccccCCCCCCcc-cccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceee
Q psy14347        202 SP-------HRHYTSKWYISLQEYPYHLWP-PYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFH  272 (316)
Q Consensus       202 ~p-------~r~~~~Kw~v~~~~y~~~~yP-~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~  272 (316)
                      ..       .+.....|+...... ...+. .++.|++.++.+++++++-.-.   +....||..++.-+.+.|.+...
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~rr~~~~~~g~fd---~~~~~eD~~l~~r~~~~G~~~~~  201 (228)
T PF13641_consen  127 NDRNWLTRLQDLFFARWHLRFRSG-RRALGVAFLSGSGMLFRRSALEEVGGFD---PFILGEDFDLCLRLRAAGWRIVY  201 (228)
T ss_dssp             TCCCEEEE-TT--S-EETTTS-TT--B----S-B--TEEEEEHHHHHHH-S-----SSSSSHHHHHHHHHHHTT--EEE
T ss_pred             CCCCHHHHHHHHHHhhhhhhhhhh-hcccceeeccCcEEEEEHHHHHHhCCCC---CCCcccHHHHHHHHHHCCCcEEE
Confidence            00       000001111100000 01111 4467999999999999884211   14456999999999988877654

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=95.58  E-value=0.37  Score=46.44  Aligned_cols=190  Identities=13%  Similarity=0.055  Sum_probs=97.7

Q ss_pred             eEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCC--EEEeeeccCCCCchHH
Q psy14347         46 RVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYND--IVQAKFIDSYFNNTIK  123 (316)
Q Consensus        46 ~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~D--Il~~d~~DsY~Nlt~K  123 (316)
                      .+-|+|.+.-+...-.+.|+ +..++.. +  .+.++++...+. |++. +.+++-.++|.+  +.... ...-.....|
T Consensus        42 ~VSViiP~~nee~~l~~~L~-Sl~~q~Y-p--~~EIivvdd~s~-D~t~-~iv~~~~~~~p~~~i~~v~-~~~~~G~~~K  114 (373)
T TIGR03472        42 PVSVLKPLHGDEPELYENLA-SFCRQDY-P--GFQMLFGVQDPD-DPAL-AVVRRLRADFPDADIDLVI-DARRHGPNRK  114 (373)
T ss_pred             CeEEEEECCCCChhHHHHHH-HHHhcCC-C--CeEEEEEeCCCC-CcHH-HHHHHHHHhCCCCceEEEE-CCCCCCCChH
Confidence            34555554433333344554 3333322 2  367777766554 4432 334433456666  32221 1111222356


Q ss_pred             HHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcC
Q psy14347        124 TMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSP  203 (316)
Q Consensus       124 ~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p  203 (316)
                      .-+..+ +.+.+ +.++++.+|+|+.+..+-|.+.+....                        ++...+..|... ..+
T Consensus       115 ~~~l~~-~~~~a-~ge~i~~~DaD~~~~p~~L~~lv~~~~------------------------~~~v~~V~~~~~-~~~  167 (373)
T TIGR03472       115 VSNLIN-MLPHA-RHDILVIADSDISVGPDYLRQVVAPLA------------------------DPDVGLVTCLYR-GRP  167 (373)
T ss_pred             HHHHHH-HHHhc-cCCEEEEECCCCCcChhHHHHHHHHhc------------------------CCCcceEecccc-CCC
Confidence            655444 44554 789999999999999888877665431                        122223322211 111


Q ss_pred             ccCCC--------CCccccccC--CCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCcee
Q psy14347        204 HRHYT--------SKWYISLQE--YPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPF  271 (316)
Q Consensus       204 ~r~~~--------~Kw~v~~~~--y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~  271 (316)
                      .....        .-++.|...  ... .-+.+|.|+++++.+++.+.+---.. ....-.||+.+|..+.+.|.+..
T Consensus       168 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~a~RR~~l~~iGGf~~-~~~~~~ED~~l~~~i~~~G~~v~  243 (373)
T TIGR03472       168 VPGFWSRLGAMGINHNFLPSVMVARAL-GRARFCFGATMALRRATLEAIGGLAA-LAHHLADDYWLGELVRALGLRVV  243 (373)
T ss_pred             CCCHHHHHHHHHhhhhhhHHHHHHHhc-cCCccccChhhheeHHHHHHcCChHH-hcccchHHHHHHHHHHHcCCeEE
Confidence            11000        011211100  000 11346889999999999998742211 11223599999999988887664

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=95.46  E-value=1.2  Score=38.25  Aligned_cols=136  Identities=14%  Similarity=0.081  Sum_probs=80.1

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCC--CEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYN--DIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVL  156 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~--DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~  156 (316)
                      +.+++|...+. +.+ .+.+++-.+.+.  ++......... ....|.- .++.+.+.+ ..+|++.+|+|+.+..+.|.
T Consensus        31 ~eiivVdd~s~-d~t-~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~-~~n~g~~~a-~~d~i~~~D~D~~~~~~~l~  105 (196)
T cd02520          31 YEILFCVQDED-DPA-IPVVRKLIAKYPNVDARLLIGGEKV-GINPKVN-NLIKGYEEA-RYDILVISDSDISVPPDYLR  105 (196)
T ss_pred             eEEEEEeCCCc-chH-HHHHHHHHHHCCCCcEEEEecCCcC-CCCHhHH-HHHHHHHhC-CCCEEEEECCCceEChhHHH
Confidence            67777776665 433 344555555555  33222211111 1223433 344455554 68999999999999887777


Q ss_pred             HHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCccccccCCCCCCcccccccceEEecH
Q psy14347        157 RFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSR  236 (316)
Q Consensus       157 ~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~  236 (316)
                      ..+....                        .+...+..|.                            ++.|++.++.+
T Consensus       106 ~l~~~~~------------------------~~~~~~v~~~----------------------------~~~g~~~~~r~  133 (196)
T cd02520         106 RMVAPLM------------------------DPGVGLVTCL----------------------------CAFGKSMALRR  133 (196)
T ss_pred             HHHHHhh------------------------CCCCCeEEee----------------------------cccCceeeeEH
Confidence            6665421                        1222232221                            56799999999


Q ss_pred             HHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceee
Q psy14347        237 EVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFH  272 (316)
Q Consensus       237 ~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~  272 (316)
                      ++++++-.-.. ......||..++.-+.+.|.+...
T Consensus       134 ~~~~~~ggf~~-~~~~~~eD~~l~~rl~~~G~~i~~  168 (196)
T cd02520         134 EVLDAIGGFEA-FADYLAEDYFLGKLIWRLGYRVVL  168 (196)
T ss_pred             HHHHhccChHH-HhHHHHHHHHHHHHHHHcCCeEEE
Confidence            99998732211 122336999999988888866643

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=95.39  E-value=0.57  Score=38.16  Aligned_cols=86  Identities=17%  Similarity=0.200  Sum_probs=56.7

Q ss_pred             CccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCcccccc
Q psy14347        137 HSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQ  216 (316)
Q Consensus       137 ~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~~  216 (316)
                      +.+|++..|||..+..+.+...+.....                       .+...++.|.                   
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~-----------------------~~~~~~~~~~-------------------  111 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQ-----------------------DPDVGIVGPK-------------------  111 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHh-----------------------CCCceEEEcc-------------------
Confidence            7899999999999998887776653210                       1222222211                   


Q ss_pred             CCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecCC
Q psy14347        217 EYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGE  275 (316)
Q Consensus       217 ~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~~  275 (316)
                                +.|++.++++++++.+-.-.... ....||..+..-+...|.+....+.
T Consensus       112 ----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~eD~~~~~~~~~~g~~i~~~~~  159 (166)
T cd04186         112 ----------VSGAFLLVRREVFEEVGGFDEDF-FLYYEDVDLCLRARLAGYRVLYVPQ  159 (166)
T ss_pred             ----------CceeeEeeeHHHHHHcCCCChhh-hccccHHHHHHHHHHcCCeEEEccc
Confidence                      57999999999988763211111 1256899988877777877665544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=95.00  E-value=0.78  Score=38.62  Aligned_cols=123  Identities=8%  Similarity=-0.069  Sum_probs=68.5

Q ss_pred             HHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCcc
Q psy14347        126 MGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHR  205 (316)
Q Consensus       126 ~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r  205 (316)
                      .+++.+.+.+ +.+|++..|+|..+..+.+...+.....                       .+...+.+|......+..
T Consensus        65 ~a~n~~~~~a-~~~~v~~ld~D~~~~~~~~~~~~~~~~~-----------------------~~~~~~v~g~~~~~~~~~  120 (202)
T cd06433          65 DAMNKGIALA-TGDIIGFLNSDDTLLPGALLAVVAAFAE-----------------------HPEVDVVYGDVLLVDENG  120 (202)
T ss_pred             HHHHHHHHHc-CCCEEEEeCCCcccCchHHHHHHHHHHh-----------------------CCCccEEEeeeEEEcCCC
Confidence            4566666776 6899999999999999888887733210                       123345555443100000


Q ss_pred             CCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347        206 HYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG  274 (316)
Q Consensus       206 ~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~  274 (316)
                      .....+.........-....++.|++.++++++.+.+-.  ........||..+..-+...|......+
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--f~~~~~~~~D~~~~~r~~~~g~~~~~~~  187 (202)
T cd06433         121 RVIGRRRPPPFLDKFLLYGMPICHQATFFRRSLFEKYGG--FDESYRIAADYDLLLRLLLAGKIFKYLP  187 (202)
T ss_pred             CcccCCCCcchhhhHHhhcCcccCcceEEEHHHHHHhCC--CchhhCchhhHHHHHHHHHcCCceEecc
Confidence            001111001111111223445678888999999988732  1112234578888777777776665443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.97  E-value=0.45  Score=40.84  Aligned_cols=172  Identities=14%  Similarity=0.029  Sum_probs=84.7

Q ss_pred             HHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCC-EEEeeeccCCCCchHHHHHHHHHHHHHCCCccE
Q psy14347         62 LAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYND-IVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKF  140 (316)
Q Consensus        62 ~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~D-Il~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~f  140 (316)
                      ..|.+++.+........+.++++-..+. +. ..+.+++-.+++.. +.......+ ...    ...+......+ ..+|
T Consensus        11 ~~l~~~l~sl~~q~~~~~eiiVvddgS~-d~-t~~~~~~~~~~~~~~~~~~~~~~~-~G~----~~~~n~g~~~~-~g~~   82 (214)
T cd04196          11 KYLREQLDSILAQTYKNDELIISDDGST-DG-TVEIIKEYIDKDPFIIILIRNGKN-LGV----ARNFESLLQAA-DGDY   82 (214)
T ss_pred             HHHHHHHHHHHhCcCCCeEEEEEeCCCC-CC-cHHHHHHHHhcCCceEEEEeCCCC-ccH----HHHHHHHHHhC-CCCE
Confidence            3455555544322222466776655554 33 33444444444542 333322221 122    22333344444 7899


Q ss_pred             EEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEee--cC-cCccCCCCCc----cc
Q psy14347        141 YFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVF--VS-SPHRHYTSKW----YI  213 (316)
Q Consensus       141 vlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~--~~-~p~r~~~~Kw----~v  213 (316)
                      ++..|+|..+.++.|.+.+.....                       .+...+..|...  .. .... ....+    ..
T Consensus        83 v~~ld~Dd~~~~~~l~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  138 (214)
T cd04196          83 VFFCDQDDIWLPDKLERLLKAFLK-----------------------DDKPLLVYSDLELVDENGNPI-GESFFEYQKIK  138 (214)
T ss_pred             EEEECCCcccChhHHHHHHHHHhc-----------------------CCCceEEecCcEEECCCCCCc-ccccccccccC
Confidence            999999999988877777764111                       122334444332  11 1100 00000    00


Q ss_pred             cccCCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcC
Q psy14347        214 SLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTN  267 (316)
Q Consensus       214 ~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~g  267 (316)
                      +...+........+.|++.++.+++++++..-....  ...||.++.+.+.+.|
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~--~~~~D~~~~~~~~~~~  190 (214)
T cd04196         139 PGTSFNNLLFQNVVTGCTMAFNRELLELALPFPDAD--VIMHDWWLALLASAFG  190 (214)
T ss_pred             CccCHHHHHHhCccCCceeeEEHHHHHhhccccccc--cccchHHHHHHHHHcC
Confidence            000111112234567889999999999874322211  4678988877666544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=94.46  E-value=0.11  Score=47.25  Aligned_cols=71  Identities=8%  Similarity=0.018  Sum_probs=52.7

Q ss_pred             ccceEEecHHHHHHHHHHhc----cCCCCCCCchHHHHhhHHcCCceeecCCceecCCCCCcccc------ceeEEEecc
Q psy14347        228 TAGSYVVSREVLLDFYFASH----FTKHFRFDDIYLGILAKKTNTEPFHCGEFYFYKKDYSLHNY------QYVIASHGY  297 (316)
Q Consensus       228 ~G~~yvlS~~~~~~l~~~s~----~~~~~~~eDv~~Gi~~~k~gi~~~~~~~f~~~~~~~~~c~~------~~~i~~H~~  297 (316)
                      +|+|+.+|..+|+.|...-.    ..+.+.--|--+..|+..+|++.+..++|+.....-+.-.+      ..+++.|.+
T Consensus        12 GGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i~~C~~~lgv~LT~e~g~hQ~Di~Gd~~G~~~a~~~~pl~SlHH~   91 (255)
T PF04646_consen   12 GGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRIQACIAELGVPLTKEPGFHQMDIRGDPSGFLEAHPLAPLVSLHHW   91 (255)
T ss_pred             cCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHhCCCceecCCceeEeeccCcceeeecCCCCceeeeeeh
Confidence            89999999999999987632    34555556888999998899999999999876543333221      346788876


Q ss_pred             C
Q psy14347        298 G  298 (316)
Q Consensus       298 ~  298 (316)
                      +
T Consensus        92 ~   92 (255)
T PF04646_consen   92 D   92 (255)
T ss_pred             h
Confidence            4

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=94.36  E-value=2.6  Score=40.80  Aligned_cols=163  Identities=14%  Similarity=0.118  Sum_probs=84.4

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCC---CEEEeeeccCCCCchHHH---HHHHHHHHHHCCCccEEEEeCCceEEeH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYN---DIVQAKFIDSYFNNTIKT---MMGFKWAANYCKHSKFYFFADDDFYVST  152 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~---DIl~~d~~DsY~Nlt~K~---~~~l~w~~~~c~~~~fvlk~DDD~~Vn~  152 (316)
                      .+++++-..+. |.+ .+.+++-.+++.   .+......+.-.+-.-|.   -.+++.+.+.+++.+|++.+|+|+.+.+
T Consensus        71 ~eIIVVDd~St-D~T-~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p  148 (384)
T TIGR03469        71 LHVILVDDHST-DGT-ADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGP  148 (384)
T ss_pred             eEEEEEeCCCC-CcH-HHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCCh
Confidence            56776666555 433 223332233343   344443322222223453   3466666666656899999999999998


Q ss_pred             HHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCccccc------cCCC------C
Q psy14347        153 RNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISL------QEYP------Y  220 (316)
Q Consensus       153 ~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~------~~y~------~  220 (316)
                      +.|.+.+.....                        ....+..|..... . .....+..++.      ..||      .
T Consensus       149 ~~l~~lv~~~~~------------------------~~~~~vs~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (384)
T TIGR03469       149 DNLARLVARARA------------------------EGLDLVSLMVRLR-C-ESFWEKLLIPAFVFFFQKLYPFRWVNDP  202 (384)
T ss_pred             hHHHHHHHHHHh------------------------CCCCEEEeccccc-C-CCHHHHHHHHHHHHHHHHhcchhhhcCC
Confidence            888777654211                        1112322222100 0 00000000000      0011      0


Q ss_pred             CCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCce
Q psy14347        221 HLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEP  270 (316)
Q Consensus       221 ~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~  270 (316)
                      ......+.|++.++++++.+++---.. ......||+.++..+.+.|.+.
T Consensus       203 ~~~~~~~~G~~~lirr~~~~~vGGf~~-~~~~~~ED~~L~~r~~~~G~~v  251 (384)
T TIGR03469       203 RRRTAAAAGGCILIRREALERIGGIAA-IRGALIDDCTLAAAVKRSGGRI  251 (384)
T ss_pred             CccceeecceEEEEEHHHHHHcCCHHH-HhhCcccHHHHHHHHHHcCCcE
Confidence            111234679999999999998732211 1112479999999888888544

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=94.30  E-value=3.4  Score=36.21  Aligned_cols=163  Identities=12%  Similarity=-0.012  Sum_probs=82.4

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLR  157 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~  157 (316)
                      .++++.+-+.+. ++ ....++...+++..+....-.+  ...    -.+++...+.. +.+|++.+|+|..+.+.-|.+
T Consensus        31 ~~evivvd~~s~-d~-~~~~~~~~~~~~~~v~~i~~~~--~~~----~~a~N~g~~~a-~~d~v~~lD~D~~~~~~~l~~  101 (249)
T cd02525          31 LIEIIVVDGGST-DG-TREIVQEYAAKDPRIRLIDNPK--RIQ----SAGLNIGIRNS-RGDIIIRVDAHAVYPKDYILE  101 (249)
T ss_pred             ccEEEEEeCCCC-cc-HHHHHHHHHhcCCeEEEEeCCC--CCc----hHHHHHHHHHh-CCCEEEEECCCccCCHHHHHH
Confidence            456666655554 32 3344444444443344443221  111    13566666654 789999999999999877777


Q ss_pred             HHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeec--CcCcc-----CCCCCccccccCC--CCCCcccccc
Q psy14347        158 FLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFV--SSPHR-----HYTSKWYISLQEY--PYHLWPPYVT  228 (316)
Q Consensus       158 ~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~--~~p~r-----~~~~Kw~v~~~~y--~~~~yP~y~~  228 (316)
                      .+.....                        ++..+..|....  ..+..     ...+.+......+  +....=.++.
T Consensus       102 ~~~~~~~------------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (249)
T cd02525         102 LVEALKR------------------------TGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDT  157 (249)
T ss_pred             HHHHHhc------------------------CCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccc
Confidence            6653211                        122233333221  11100     0000000000000  0000001456


Q ss_pred             cceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecCC
Q psy14347        229 AGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGE  275 (316)
Q Consensus       229 G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~~  275 (316)
                      |++.++++++.+++.-  ........||..++.-+.+.|.+....+.
T Consensus       158 ~~~~~~~~~~~~~~g~--~~~~~~~~eD~~l~~r~~~~G~~~~~~~~  202 (249)
T cd02525         158 VHHGAYRREVFEKVGG--FDESLVRNEDAELNYRLRKAGYKIWLSPD  202 (249)
T ss_pred             cccceEEHHHHHHhCC--CCcccCccchhHHHHHHHHcCcEEEEcCC
Confidence            7888999999887632  11223456999998888888877765443

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=94.18  E-value=1.1  Score=39.37  Aligned_cols=160  Identities=11%  Similarity=-0.002  Sum_probs=83.3

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCC-CEEEeeeccCCCCchHHHHHHHHHHHHHCC-CccEEEEeCCceEEeHHHH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYN-DIVQAKFIDSYFNNTIKTMMGFKWAANYCK-HSKFYFFADDDFYVSTRNV  155 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~-DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~-~~~fvlk~DDD~~Vn~~~L  155 (316)
                      .++++++-+.+. +.+....+++=.++++ ++......   .|.-.| ..++.++.+.+. +.+|++..|+|+.+.++.|
T Consensus        28 ~~eiiVvdd~s~-D~t~~~~i~~~~~~~~~~i~~i~~~---~~~G~~-~~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l  102 (236)
T cd06435          28 NFEVIVIDNNTK-DEALWKPVEAHCAQLGERFRFFHVE---PLPGAK-AGALNYALERTAPDAEIIAVIDADYQVEPDWL  102 (236)
T ss_pred             CcEEEEEeCCCC-chhHHHHHHHHHHHhCCcEEEEEcC---CCCCCc-hHHHHHHHHhcCCCCCEEEEEcCCCCcCHHHH
Confidence            356665555544 4443333322222333 44333222   233333 345777777663 4799999999999999888


Q ss_pred             HHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCccccc------cCC------CCCCc
Q psy14347        156 LRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISL------QEY------PYHLW  223 (316)
Q Consensus       156 ~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~------~~y------~~~~y  223 (316)
                      ...+.....                        +...+..|...    .++....++...      ..+      ....=
T Consensus       103 ~~l~~~~~~------------------------~~~~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (236)
T cd06435         103 KRLVPIFDD------------------------PRVGFVQAPQD----YRDGEESLFKRMCYAEYKGFFDIGMVSRNERN  154 (236)
T ss_pred             HHHHHHhcC------------------------CCeeEEecCcc----ccCCCccHHHHHHhHHHHHHHHHHhccccccC
Confidence            887765311                        11122222110    011111111000      000      00000


Q ss_pred             ccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeec
Q psy14347        224 PPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHC  273 (316)
Q Consensus       224 P~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~  273 (316)
                      -.++.|++.++++++++.+---.   +.+..||+-++.-+.+.|.+....
T Consensus       155 ~~~~~g~~~~~rr~~~~~iGgf~---~~~~~eD~dl~~r~~~~G~~~~~~  201 (236)
T cd06435         155 AIIQHGTMCLIRRSALDDVGGWD---EWCITEDSELGLRMHEAGYIGVYV  201 (236)
T ss_pred             ceEEecceEEEEHHHHHHhCCCC---CccccchHHHHHHHHHCCcEEEEc
Confidence            12567888999999999873111   223579999999888888766543

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=94.09  E-value=4.5  Score=37.34  Aligned_cols=51  Identities=12%  Similarity=0.087  Sum_probs=34.9

Q ss_pred             ccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347        224 PPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG  274 (316)
Q Consensus       224 P~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~  274 (316)
                      -+++.|++.++++++..++---.........||+-+..-+.+.|-+....|
T Consensus       168 ~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p  218 (299)
T cd02510         168 SPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVP  218 (299)
T ss_pred             CccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEee
Confidence            356789999999999998732222222234699998877777886655443

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.92  E-value=1.3  Score=37.82  Aligned_cols=93  Identities=16%  Similarity=0.129  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCc
Q psy14347        125 MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPH  204 (316)
Q Consensus       125 ~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~  204 (316)
                      -.+++++.  ....+|++..|+|..+..+.|...+....                        .+...+..|.....   
T Consensus        69 n~~~~~a~--~~~~d~v~~ld~D~~~~~~~l~~l~~~~~------------------------~~~~~~~~~~~~~~---  119 (202)
T cd04185          69 YEGVRRAY--ELGYDWIWLMDDDAIPDPDALEKLLAYAD------------------------KDNPQFLAPLVLDP---  119 (202)
T ss_pred             HHHHHHHh--ccCCCEEEEeCCCCCcChHHHHHHHHHHh------------------------cCCceEecceeEcC---
Confidence            34566665  23789999999999999877666554321                        12223333332210   


Q ss_pred             cCCCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhccCC--CCCCCchHHHHhhHHcCCce
Q psy14347        205 RHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTK--HFRFDDIYLGILAKKTNTEP  270 (316)
Q Consensus       205 r~~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~--~~~~eDv~~Gi~~~k~gi~~  270 (316)
                         .+                  .+++.++.+++++.+-   ...+  ....||+.++.-+.+.|...
T Consensus       120 ---~~------------------~~~~~~~~~~~~~~~g---~~~~~~~~~~eD~~~~~r~~~~G~~i  163 (202)
T cd04185         120 ---DG------------------SFVGVLISRRVVEKIG---LPDKEFFIWGDDTEYTLRASKAGPGI  163 (202)
T ss_pred             ---CC------------------ceEEEEEeHHHHHHhC---CCChhhhccchHHHHHHHHHHcCCcE
Confidence               00                  3456789999988762   1111  23469999998888888766

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.78  E-value=4  Score=35.19  Aligned_cols=158  Identities=11%  Similarity=0.006  Sum_probs=80.8

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHC--CCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERY--NDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVL  156 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~--~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~  156 (316)
                      ++++.|-+.+. +. ..+.++ +....  ..+....... -.|. -|. .++++..+.+ ..+|++.+|+|..+..+-|.
T Consensus        29 ~eiivvdd~s~-d~-t~~~~~-~~~~~~~~~v~~~~~~~-~~~~-g~~-~a~n~g~~~~-~~d~i~~~D~D~~~~~~~l~  101 (229)
T cd04192          29 FEVILVDDHST-DG-TVQILE-FAAAKPNFQLKILNNSR-VSIS-GKK-NALTTAIKAA-KGDWIVTTDADCVVPSNWLL  101 (229)
T ss_pred             eEEEEEcCCCC-cC-hHHHHH-HHHhCCCcceEEeeccC-cccc-hhH-HHHHHHHHHh-cCCEEEEECCCcccCHHHHH
Confidence            56665655444 32 333344 23333  3444444433 1232 222 3456666665 78999999999999988777


Q ss_pred             HHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCcc---C-CCCCccccc---cCCCCCCccccccc
Q psy14347        157 RFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHR---H-YTSKWYISL---QEYPYHLWPPYVTA  229 (316)
Q Consensus       157 ~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r---~-~~~Kw~v~~---~~y~~~~yP~y~~G  229 (316)
                      +.+....                        ......++|......+..   . ..-.+....   ........|..+.|
T Consensus       102 ~l~~~~~------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  157 (229)
T cd04192         102 TFVAFIQ------------------------KEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNG  157 (229)
T ss_pred             HHHHHhh------------------------cCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCcccccc
Confidence            7665321                        122234444433110100   0 000000000   00112234566789


Q ss_pred             ceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCC
Q psy14347        230 GSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNT  268 (316)
Q Consensus       230 ~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi  268 (316)
                      ++.++++++++++---.. ......||..++.-+.+.|.
T Consensus       158 ~~~~~rr~~~~~~ggf~~-~~~~~~eD~~~~~~~~~~g~  195 (229)
T cd04192         158 ANMAYRKEAFFEVGGFEG-NDHIASGDDELLLAKVASKY  195 (229)
T ss_pred             ceEEEEHHHHHHhcCCcc-ccccccCCHHHHHHHHHhCC
Confidence            999999999998632111 12345688877766655565

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=93.77  E-value=0.83  Score=36.92  Aligned_cols=92  Identities=8%  Similarity=0.013  Sum_probs=49.4

Q ss_pred             HHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCC-EEEeeeccCCCCchHHHHHHHHHHHHHCCCccE
Q psy14347         62 LAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYND-IVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKF  140 (316)
Q Consensus        62 ~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~D-Il~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~f  140 (316)
                      +.|+++-.+........+.++.+-..+. +. ....+.++...+.- ++.....   .|..  ...+++++.+.+ +.+|
T Consensus        10 ~~l~~~l~sl~~q~~~~~~iivvdd~s~-d~-t~~~~~~~~~~~~~~~~~~~~~---~~~g--~~~~~n~~~~~~-~~~~   81 (180)
T cd06423          10 AVIERTIESLLALDYPKLEVIVVDDGST-DD-TLEILEELAALYIRRVLVVRDK---ENGG--KAGALNAGLRHA-KGDI   81 (180)
T ss_pred             HHHHHHHHHHHhCCCCceEEEEEeCCCc-cc-hHHHHHHHhccccceEEEEEec---ccCC--chHHHHHHHHhc-CCCE
Confidence            4555555544332223455555544443 33 33444444443322 2222221   2211  234566666666 8999


Q ss_pred             EEEeCCceEEeHHHHHHHHhc
Q psy14347        141 YFFADDDFYVSTRNVLRFLRN  161 (316)
Q Consensus       141 vlk~DDD~~Vn~~~L~~~L~~  161 (316)
                      ++.+|+|..+....|...+..
T Consensus        82 i~~~D~D~~~~~~~l~~~~~~  102 (180)
T cd06423          82 VVVLDADTILEPDALKRLVVP  102 (180)
T ss_pred             EEEECCCCCcChHHHHHHHHH
Confidence            999999999988777766443

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>PRK11204 N-glycosyltransferase; Provisional

Probab=93.69  E-value=2.2  Score=41.42  Aligned_cols=185  Identities=10%  Similarity=0.014  Sum_probs=95.8

Q ss_pred             eeEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHH
Q psy14347         45 IRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKT  124 (316)
Q Consensus        45 ~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~  124 (316)
                      +.+-|+|.+.-+..    .|+++-.+.........+++ ++.... ++...+.+++..+++..+......   .|.. |.
T Consensus        54 p~vsViIp~yne~~----~i~~~l~sl~~q~yp~~eii-VvdD~s-~d~t~~~l~~~~~~~~~v~~i~~~---~n~G-ka  123 (420)
T PRK11204         54 PGVSILVPCYNEGE----NVEETISHLLALRYPNYEVI-AINDGS-SDNTGEILDRLAAQIPRLRVIHLA---ENQG-KA  123 (420)
T ss_pred             CCEEEEEecCCCHH----HHHHHHHHHHhCCCCCeEEE-EEECCC-CccHHHHHHHHHHhCCcEEEEEcC---CCCC-HH
Confidence            44566666554333    34444433221111234444 444433 233445565556666666555433   3332 43


Q ss_pred             HHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCc
Q psy14347        125 MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPH  204 (316)
Q Consensus       125 ~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~  204 (316)
                       .+++.+.+.+ +.+|++..|+|+.+..+.|.+.+.....                       +++.....|...    .
T Consensus       124 -~aln~g~~~a-~~d~i~~lDaD~~~~~d~L~~l~~~~~~-----------------------~~~v~~v~g~~~----~  174 (420)
T PRK11204        124 -NALNTGAAAA-RSEYLVCIDGDALLDPDAAAYMVEHFLH-----------------------NPRVGAVTGNPR----I  174 (420)
T ss_pred             -HHHHHHHHHc-CCCEEEEECCCCCCChhHHHHHHHHHHh-----------------------CCCeEEEECCce----e
Confidence             4566666665 7899999999999999888776654310                       122222222211    0


Q ss_pred             cCCCCCcccc--ccCCCC-----------CCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCcee
Q psy14347        205 RHYTSKWYIS--LQEYPY-----------HLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPF  271 (316)
Q Consensus       205 r~~~~Kw~v~--~~~y~~-----------~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~  271 (316)
                      ++. ..|.-.  ..+|..           ...+..++|.+.++.+++++++--   --+..-.||+.++.-+.+.|.+..
T Consensus       175 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg---~~~~~~~ED~~l~~rl~~~G~~i~  250 (420)
T PRK11204        175 RNR-STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGY---WSTDMITEDIDISWKLQLRGWDIR  250 (420)
T ss_pred             ccc-hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHhCC---CCCCcccchHHHHHHHHHcCCeEE
Confidence            100 000000  000000           011223478889999999987621   112234699999998888887654


Q ss_pred             e
Q psy14347        272 H  272 (316)
Q Consensus       272 ~  272 (316)
                      -
T Consensus       251 ~  251 (420)
T PRK11204        251 Y  251 (420)
T ss_pred             e
Confidence            3

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=93.64  E-value=1.2  Score=36.04  Aligned_cols=99  Identities=12%  Similarity=0.080  Sum_probs=51.5

Q ss_pred             EEEEEcCCCCHHHH-HHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHH
Q psy14347         48 VYIVKSALRHFERR-LAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMM  126 (316)
Q Consensus        48 li~V~S~~~~~~rR-~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~  126 (316)
                      +|.+.-.+....+- +.+++.  .     ...++++++-..+.  +.....+++-.+....+......+.   .  -.-.
T Consensus         3 vip~~n~~~~l~~~l~sl~~q--~-----~~~~eiivvdd~s~--d~~~~~~~~~~~~~~~i~~i~~~~n---~--g~~~   68 (169)
T PF00535_consen    3 VIPTYNEAEYLERTLESLLKQ--T-----DPDFEIIVVDDGST--DETEEILEEYAESDPNIRYIRNPEN---L--GFSA   68 (169)
T ss_dssp             EEEESS-TTTHHHHHHHHHHH--S-----GCEEEEEEEECS-S--SSHHHHHHHHHCCSTTEEEEEHCCC---S--HHHH
T ss_pred             EEEeeCCHHHHHHHHHHHhhc--c-----CCCEEEEEeccccc--ccccccccccccccccccccccccc---c--cccc
Confidence            44444445555544 457777  1     12345655554443  3334444444443445555554443   2  2233


Q ss_pred             HHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhc
Q psy14347        127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRN  161 (316)
Q Consensus       127 ~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~  161 (316)
                      ++..+.++. ..+|++.+|||.++....|..++..
T Consensus        69 ~~n~~~~~a-~~~~i~~ld~D~~~~~~~l~~l~~~  102 (169)
T PF00535_consen   69 ARNRGIKHA-KGEYILFLDDDDIISPDWLEELVEA  102 (169)
T ss_dssp             HHHHHHHH---SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred             ccccccccc-ceeEEEEeCCCceEcHHHHHHHHHH
Confidence            445555554 5669999999999998866665554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=93.52  E-value=2.4  Score=37.62  Aligned_cols=187  Identities=10%  Similarity=0.049  Sum_probs=90.9

Q ss_pred             CeeEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHH
Q psy14347         44 QIRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIK  123 (316)
Q Consensus        44 ~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K  123 (316)
                      ...+-|+|.+.-+...-...|+.-..+..  ....++++++...+. +. ..+.+.+..+.  .+......   .|. -|
T Consensus        28 ~~~isVvip~~n~~~~l~~~l~si~~q~~--~~~~~eiivvdd~s~-d~-t~~~~~~~~~~--~v~~i~~~---~~~-g~   97 (251)
T cd06439          28 LPTVTIIIPAYNEEAVIEAKLENLLALDY--PRDRLEIIVVSDGST-DG-TAEIAREYADK--GVKLLRFP---ERR-GK   97 (251)
T ss_pred             CCEEEEEEecCCcHHHHHHHHHHHHhCcC--CCCcEEEEEEECCCC-cc-HHHHHHHHhhC--cEEEEEcC---CCC-Ch
Confidence            34556666665444444555655554322  222256665554443 33 33333332222  23333222   222 23


Q ss_pred             HHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcC
Q psy14347        124 TMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSP  203 (316)
Q Consensus       124 ~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p  203 (316)
                      . .+++...+.. ..+|++.+|+|+.+..+-|.+.+....                        .+...+.+|......+
T Consensus        98 ~-~a~n~gi~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~------------------------~~~~~~v~~~~~~~~~  151 (251)
T cd06439          98 A-AALNRALALA-TGEIVVFTDANALLDPDALRLLVRHFA------------------------DPSVGAVSGELVIVDG  151 (251)
T ss_pred             H-HHHHHHHHHc-CCCEEEEEccccCcCHHHHHHHHHHhc------------------------CCCccEEEeEEEecCC
Confidence            2 3455555554 569999999999999776776665431                        1233455554431111


Q ss_pred             cc-CCCCC--cccccc--CCC-CCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceee
Q psy14347        204 HR-HYTSK--WYISLQ--EYP-YHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFH  272 (316)
Q Consensus       204 ~r-~~~~K--w~v~~~--~y~-~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~  272 (316)
                      .. .....  |.....  .+. ....+..+.|+++.+.+++.+.      .......||..++..+.+.|.+...
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~------~~~~~~~eD~~l~~~~~~~G~~~~~  220 (251)
T cd06439         152 GGSGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFRP------LPADTINDDFVLPLRIARQGYRVVY  220 (251)
T ss_pred             cccchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhcC------CCcccchhHHHHHHHHHHcCCeEEe
Confidence            00 00000  100000  000 0112334567777777776651      1112336999998888878866554

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=93.32  E-value=2.5  Score=37.00  Aligned_cols=74  Identities=9%  Similarity=0.095  Sum_probs=43.7

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRF  158 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~  158 (316)
                      .+++++...+. ++ ....+ .+...+..+....- +   | .-|.- ++....... ..+|++.+|+|+.+..+.|.+.
T Consensus        29 ~eiivvdd~s~-d~-~~~~l-~~~~~~~~~~v~~~-~---~-~g~~~-a~n~g~~~a-~~d~v~~lD~D~~~~~~~l~~l   98 (235)
T cd06434          29 LEIIVVTDGDD-EP-YLSIL-SQTVKYGGIFVITV-P---H-PGKRR-ALAEGIRHV-TTDIVVLLDSDTVWPPNALPEM   98 (235)
T ss_pred             CEEEEEeCCCC-hH-HHHHH-HhhccCCcEEEEec-C---C-CChHH-HHHHHHHHh-CCCEEEEECCCceeChhHHHHH
Confidence            45666655544 33 33333 34555666665542 2   2 22333 333333333 7899999999999999988777


Q ss_pred             HhcC
Q psy14347        159 LRNP  162 (316)
Q Consensus       159 L~~~  162 (316)
                      +...
T Consensus        99 ~~~~  102 (235)
T cd06434          99 LKPF  102 (235)
T ss_pred             HHhc
Confidence            7653

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=93.22  E-value=1.9  Score=37.63  Aligned_cols=45  Identities=13%  Similarity=0.074  Sum_probs=33.2

Q ss_pred             ccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCcee
Q psy14347        224 PPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPF  271 (316)
Q Consensus       224 P~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~  271 (316)
                      ..++.|++.++++++++++..-   ......||..++.-+.+.|.+..
T Consensus       157 ~~~~~g~~~~~r~~~~~~ig~~---~~~~~~eD~~l~~r~~~~g~~i~  201 (234)
T cd06421         157 AAFCCGSGAVVRREALDEIGGF---PTDSVTEDLATSLRLHAKGWRSV  201 (234)
T ss_pred             CceecCceeeEeHHHHHHhCCC---CccceeccHHHHHHHHHcCceEE
Confidence            4567899999999999986321   12344799999988888887554

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=92.85  E-value=0.98  Score=38.53  Aligned_cols=75  Identities=11%  Similarity=-0.002  Sum_probs=43.2

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRF  158 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~  158 (316)
                      ..+++|.-.+. +......+++-.+.+. +......+   |.- + -.+++.+...+ +.+|++..|+|.++.++.|...
T Consensus        30 ~eiiivdd~ss-~d~t~~~~~~~~~~~~-i~~i~~~~---n~G-~-~~a~N~g~~~a-~gd~i~~lD~Dd~~~~~~l~~~  101 (201)
T cd04195          30 DEVVLVKDGPV-TQSLNEVLEEFKRKLP-LKVVPLEK---NRG-L-GKALNEGLKHC-TYDWVARMDTDDISLPDRFEKQ  101 (201)
T ss_pred             cEEEEEECCCC-chhHHHHHHHHHhcCC-eEEEEcCc---ccc-H-HHHHHHHHHhc-CCCEEEEeCCccccCcHHHHHH
Confidence            45554433333 3444444544455555 44333322   221 1 22455556655 7899999999999998888776


Q ss_pred             Hhc
Q psy14347        159 LRN  161 (316)
Q Consensus       159 L~~  161 (316)
                      +..
T Consensus       102 ~~~  104 (201)
T cd04195         102 LDF  104 (201)
T ss_pred             HHH
Confidence            664

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=92.15  E-value=0.32  Score=41.91  Aligned_cols=126  Identities=16%  Similarity=0.090  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeec
Q psy14347        121 TIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFV  200 (316)
Q Consensus       121 t~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~  200 (316)
                      ..|+-...+.+... .+.++++..|+|+.|+.+-|...+....                        ++...+..|.-. 
T Consensus        16 N~Kv~nL~~~~~~~-a~~d~~~~~DsDi~v~p~~L~~lv~~l~------------------------~p~vglVt~~~~-   69 (175)
T PF13506_consen   16 NPKVNNLAQGLEAG-AKYDYLVISDSDIRVPPDYLRELVAPLA------------------------DPGVGLVTGLPR-   69 (175)
T ss_pred             ChHHHHHHHHHHhh-CCCCEEEEECCCeeECHHHHHHHHHHHh------------------------CCCCcEEEeccc-
Confidence            34555555554442 3789999999999999988887766532                        122333333211 


Q ss_pred             CcCccCCCCC---ccc---cccCCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347        201 SSPHRHYTSK---WYI---SLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG  274 (316)
Q Consensus       201 ~~p~r~~~~K---w~v---~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~  274 (316)
                      ..|.+.-.+.   -++   +.-... -.-.++|.|+++++.+++++++--- ......--||..+|..+.+.|.+..-.+
T Consensus        70 ~~~~~~~~~~l~~~~~~~~~~~~~a-~~~~~~~~G~~m~~rr~~L~~~GG~-~~l~~~ladD~~l~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen   70 GVPARGFWSRLEAAFFNFLPGVLQA-LGGAPFAWGGSMAFRREALEEIGGF-EALADYLADDYALGRRLRARGYRVVLSP  147 (175)
T ss_pred             ccCCcCHHHHHHHHHHhHHHHHHHH-hcCCCceecceeeeEHHHHHHcccH-HHHhhhhhHHHHHHHHHHHCCCeEEEcc
Confidence            1111110000   011   100000 1135789999999999999987211 1112244799999999999998776543

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=91.55  E-value=5.9  Score=35.29  Aligned_cols=163  Identities=11%  Similarity=0.073  Sum_probs=82.7

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCCC-EEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYND-IVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVL  156 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~D-Il~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~  156 (316)
                      .+.++++-..+. |. ..+.+++-.++|++ .+..-...  .|.-.  -.+++...... ..+|++.+|+|..+.++.|.
T Consensus        40 ~~eiivvDdgS~-D~-t~~i~~~~~~~~~~~~v~~~~~~--~n~G~--~~a~n~g~~~a-~g~~i~~lD~D~~~~~~~l~  112 (243)
T PLN02726         40 DFEIIVVDDGSP-DG-TQDVVKQLQKVYGEDRILLRPRP--GKLGL--GTAYIHGLKHA-SGDFVVIMDADLSHHPKYLP  112 (243)
T ss_pred             CeEEEEEeCCCC-CC-HHHHHHHHHHhcCCCcEEEEecC--CCCCH--HHHHHHHHHHc-CCCEEEEEcCCCCCCHHHHH
Confidence            467777766555 33 33444444455653 22221111  22221  13445555544 67999999999999998887


Q ss_pred             HHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecC--c-C----ccCCCCC--ccccccCCCCCCccccc
Q psy14347        157 RFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVS--S-P----HRHYTSK--WYISLQEYPYHLWPPYV  227 (316)
Q Consensus       157 ~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~--~-p----~r~~~~K--w~v~~~~y~~~~yP~y~  227 (316)
                      +++....                        .....+.+|.....  . +    .|.-.++  ..+...... ... +.+
T Consensus       113 ~l~~~~~------------------------~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~-~d~  166 (243)
T PLN02726        113 SFIKKQR------------------------ETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLW-PGV-SDL  166 (243)
T ss_pred             HHHHHHH------------------------hcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhC-CCC-CcC
Confidence            7665421                        11234445543210  0 0    0100000  000001111 111 235


Q ss_pred             ccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecCC
Q psy14347        228 TAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGE  275 (316)
Q Consensus       228 ~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~~  275 (316)
                      .|++.++++++++.+...... ..+ ..|+-+.+.+.+.|.+....|-
T Consensus       167 ~g~~~~~rr~~~~~i~~~~~~-~~~-~~~~el~~~~~~~g~~i~~vp~  212 (243)
T PLN02726        167 TGSFRLYKRSALEDLVSSVVS-KGY-VFQMEIIVRASRKGYRIEEVPI  212 (243)
T ss_pred             CCcccceeHHHHHHHHhhccC-CCc-EEehHHHHHHHHcCCcEEEeCc
Confidence            688889999999998643221 122 2366667777778877776553

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=91.55  E-value=12  Score=34.88  Aligned_cols=193  Identities=12%  Similarity=0.077  Sum_probs=98.2

Q ss_pred             eEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHH
Q psy14347         46 RVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTM  125 (316)
Q Consensus        46 ~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~  125 (316)
                      .+-++|.|--.-....+.++..=....    ....++ ++-....+ ...+.+....  +.++......++.-= ..=.-
T Consensus         4 ~i~~iiv~yn~~~~l~~~l~~l~~~~~----~~~~iv-~vDn~s~d-~~~~~~~~~~--~~~v~~i~~~~NlG~-agg~n   74 (305)
T COG1216           4 KISIIIVTYNRGEDLVECLASLAAQTY----PDDVIV-VVDNGSTD-GSLEALKARF--FPNVRLIENGENLGF-AGGFN   74 (305)
T ss_pred             ceEEEEEecCCHHHHHHHHHHHhcCCC----CCcEEE-EccCCCCC-CCHHHHHhhc--CCcEEEEEcCCCccc-hhhhh
Confidence            344555555444444455554433322    112233 34333312 2222333222  677877665554210 11111


Q ss_pred             HHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecC----
Q psy14347        126 MGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVS----  201 (316)
Q Consensus       126 ~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~----  201 (316)
                      .+++.+...-  .+|++-.++|+.+..+.|.+.++.....                        ......|.....    
T Consensus        75 ~g~~~a~~~~--~~~~l~LN~D~~~~~~~l~~ll~~~~~~------------------------~~~~~~~~~i~~~~~~  128 (305)
T COG1216          75 RGIKYALAKG--DDYVLLLNPDTVVEPDLLEELLKAAEED------------------------PAAGVVGPLIRNYDES  128 (305)
T ss_pred             HHHHHHhcCC--CcEEEEEcCCeeeChhHHHHHHHHHHhC------------------------CCCeEeeeeEecCCCC
Confidence            4666666532  2299999999999999888888754221                        111122222210    


Q ss_pred             -cCc-cC-----CCCCc-cccccCCCC-----CCcccccccceEEecHHHHHHHHHHhccCC-CCCCCchHHHHhhHHcC
Q psy14347        202 -SPH-RH-----YTSKW-YISLQEYPY-----HLWPPYVTAGSYVVSREVLLDFYFASHFTK-HFRFDDIYLGILAKKTN  267 (316)
Q Consensus       202 -~p~-r~-----~~~Kw-~v~~~~y~~-----~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~-~~~~eDv~~Gi~~~k~g  267 (316)
                       .+. +.     ....| ..+..+.+.     ...-++++|++.++++++++++--  ..-. .+..||+-.+.=+.++|
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~--~de~~F~y~eD~D~~~R~~~~G  206 (305)
T COG1216         129 LYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVASLSGACLLIRREAFEKVGG--FDERFFIYYEDVDLCLRARKAG  206 (305)
T ss_pred             cchheeccccccccccceecccccccccccchhhhhhhcceeeeEEcHHHHHHhCC--CCcccceeehHHHHHHHHHHcC
Confidence             000 00     01112 111111111     112225789999999999999854  2223 35799999999999999


Q ss_pred             CceeecCC
Q psy14347        268 TEPFHCGE  275 (316)
Q Consensus       268 i~~~~~~~  275 (316)
                      .+..-.|.
T Consensus       207 ~~i~~~p~  214 (305)
T COG1216         207 YKIYYVPD  214 (305)
T ss_pred             CeEEEeec
Confidence            76654443

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=91.48  E-value=11  Score=37.23  Aligned_cols=185  Identities=13%  Similarity=0.097  Sum_probs=95.5

Q ss_pred             eeEEEEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHH
Q psy14347         45 IRVVYIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKT  124 (316)
Q Consensus        45 ~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~  124 (316)
                      +.+-|+|.+.-+...-++.|+.- .+.. +.  ..+++.+-..+. | ...+.+++..+++..+......   .|.. |.
T Consensus        75 p~vsViIP~yNE~~~i~~~l~sl-l~q~-yp--~~eIivVdDgs~-D-~t~~~~~~~~~~~~~v~vv~~~---~n~G-ka  144 (444)
T PRK14583         75 PLVSILVPCFNEGLNARETIHAA-LAQT-YT--NIEVIAINDGSS-D-DTAQVLDALLAEDPRLRVIHLA---HNQG-KA  144 (444)
T ss_pred             CcEEEEEEeCCCHHHHHHHHHHH-HcCC-CC--CeEEEEEECCCC-c-cHHHHHHHHHHhCCCEEEEEeC---CCCC-HH
Confidence            44556666554433333444332 2221 12  356555544443 3 3445555555667665544332   2322 43


Q ss_pred             HHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCc
Q psy14347        125 MMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPH  204 (316)
Q Consensus       125 ~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~  204 (316)
                       .+++.....+ +.+|++..|.|+.+..+.|...+.....                       +++.....|....  ..
T Consensus       145 -~AlN~gl~~a-~~d~iv~lDAD~~~~~d~L~~lv~~~~~-----------------------~~~~g~v~g~~~~--~~  197 (444)
T PRK14583        145 -IALRMGAAAA-RSEYLVCIDGDALLDKNAVPYLVAPLIA-----------------------NPRTGAVTGNPRI--RT  197 (444)
T ss_pred             -HHHHHHHHhC-CCCEEEEECCCCCcCHHHHHHHHHHHHh-----------------------CCCeEEEEcccee--cC
Confidence             4566666665 7899999999999999988776653210                       1222222221110  00


Q ss_pred             cC-CCCCccccc------------cCCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCcee
Q psy14347        205 RH-YTSKWYISL------------QEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPF  271 (316)
Q Consensus       205 r~-~~~Kw~v~~------------~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~  271 (316)
                      ++ ..++....+            ..|. .  +..++|++..+.+++++++---.   +..-.||.-+|.-+...|.+..
T Consensus       198 ~~~~~~~~~~~e~~~~~~~~~~~~~~~g-~--~~~~sG~~~~~rr~al~~vGg~~---~~~i~ED~dl~~rl~~~G~~i~  271 (444)
T PRK14583        198 RSTLIGRVQVGEFSSIIGLIKRTQRVYG-Q--VFTVSGVVAAFRRRALADVGYWS---PDMITEDIDISWKLQLKHWSVF  271 (444)
T ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHhC-C--ceEecCceeEEEHHHHHHcCCCC---CCcccccHHHHHHHHHcCCeEE
Confidence            10 001111000            0110 1  22357888899999988763111   2234699999999888887554


Q ss_pred             e
Q psy14347        272 H  272 (316)
Q Consensus       272 ~  272 (316)
                      .
T Consensus       272 ~  272 (444)
T PRK14583        272 F  272 (444)
T ss_pred             E
Confidence            3

>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase

Probab=90.51  E-value=0.39  Score=48.38  Aligned_cols=61  Identities=16%  Similarity=0.250  Sum_probs=44.2

Q ss_pred             CCCCchHHHHhhHH-cCCceeec-CCcee--cCCC---C----CccccceeEEEeccCChHHHHHHHHHHHh
Q psy14347        252 FRFDDIYLGILAKK-TNTEPFHC-GEFYF--YKKD---Y----SLHNYQYVIASHGYGNHDELLRVWNEQRG  312 (316)
Q Consensus       252 ~~~eDv~~Gi~~~k-~gi~~~~~-~~f~~--~~~~---~----~~c~~~~~i~~H~~~~p~~m~~~W~~~~~  312 (316)
                      -.-||+.+|.|..+ +||.+++. .++..  +...   +    ....+..+||+|.+++|+.|++++.++..
T Consensus        11 s~~~Dv~lGRCI~~~~gi~Ct~~~q~l~y~~~~~~~~~~~~~~~~~~~~~AiTlHPvk~p~~mYrLH~y~~~   82 (499)
T PF05679_consen   11 SNHEDVELGRCIKKFTGISCTWSYQGLFYHNYELNKNDFIGDLKNKEFHNAITLHPVKSPAYMYRLHRYFLS   82 (499)
T ss_pred             CCCchhHHHHHHHHhcCCCeeecccceEEEeeccCCCcccccccchhhhcceeeccCCCHHHHHHHHHHHHH
Confidence            35699999999864 89998864 22221  1111   1    23456789999999999999999998865

Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=90.24  E-value=7.7  Score=34.38  Aligned_cols=122  Identities=9%  Similarity=0.037  Sum_probs=66.0

Q ss_pred             HHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCcc
Q psy14347        126 MGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHR  205 (316)
Q Consensus       126 ~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r  205 (316)
                      .+++...++. +.+|++.+|+|+.+.++.|.+.+.....                      .+++.....|.+.......
T Consensus        74 ~a~n~g~~~a-~gd~i~~~DaD~~~~~~~l~~~~~~~~~----------------------~~~~v~~~~~~~~~~~~~~  130 (241)
T cd06427          74 KACNYALAFA-RGEYVVIYDAEDAPDPDQLKKAVAAFAR----------------------LDDKLACVQAPLNYYNARE  130 (241)
T ss_pred             HHHHHHHHhc-CCCEEEEEcCCCCCChHHHHHHHHHHHh----------------------cCCCEEEEeCceEeeCCCc
Confidence            4566666665 6799999999999999988887765310                      0011111112211000000


Q ss_pred             CCCCCccccc--c----CCC---CCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeec
Q psy14347        206 HYTSKWYISL--Q----EYP---YHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHC  273 (316)
Q Consensus       206 ~~~~Kw~v~~--~----~y~---~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~  273 (316)
                      ....+.+...  .    ..+   ....+..++|++.++++++++.+-.-   -+....||..+++-+.+.|.+....
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~---~~~~~~eD~~l~~rl~~~G~r~~~~  204 (241)
T cd06427         131 NWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLRELGGW---DPFNVTEDADLGLRLARAGYRTGVL  204 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHHcCCC---CcccchhhHHHHHHHHHCCceEEEe
Confidence            0000100000  0    000   11233456788899999999886321   1223469999998887777666543

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=90.16  E-value=11  Score=31.99  Aligned_cols=163  Identities=9%  Similarity=-0.014  Sum_probs=77.4

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRF  158 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~  158 (316)
                      +.++.+-+.+. +......+......+.-+... ..+.-.+.    -.+++++.+.. ..+|++..|+|..+..+.|...
T Consensus        32 ~eiivvd~gs~-d~~~~~~~~~~~~~~~~~~~~-~~~~~~g~----~~a~n~g~~~a-~~d~i~~ld~D~~~~~~~l~~~  104 (202)
T cd04184          32 WELCIADDAST-DPEVKRVLKKYAAQDPRIKVV-FREENGGI----SAATNSALELA-TGEFVALLDHDDELAPHALYEV  104 (202)
T ss_pred             eEEEEEeCCCC-ChHHHHHHHHHHhcCCCEEEE-EcccCCCH----HHHHHHHHHhh-cCCEEEEECCCCcCChHHHHHH
Confidence            55655545444 444433344333333323322 22221121    23455555554 6799999999999998877777


Q ss_pred             HhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCccccccCCCCC-CcccccccceEEecHH
Q psy14347        159 LRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYH-LWPPYVTAGSYVVSRE  237 (316)
Q Consensus       159 L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~~~y~~~-~yP~y~~G~~yvlS~~  237 (316)
                      +.....                       .+...+..+....-.........++.+  .|... .+..-+.|++-+++++
T Consensus       105 ~~~~~~-----------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~  159 (202)
T cd04184         105 VKALNE-----------------------HPDADLIYSDEDKIDEGGKRSEPFFKP--DWSPDLLLSQNYIGHLLVYRRS  159 (202)
T ss_pred             HHHHHh-----------------------CCCCCEEEccHHhccCCCCEeccccCC--CCCHHHhhhcCCccceEeEEHH
Confidence            764311                       112222222111000000000001100  01111 0111123555678888


Q ss_pred             HHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecCC
Q psy14347        238 VLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGE  275 (316)
Q Consensus       238 ~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~~  275 (316)
                      +++++--  ........||.-++.-+.+.|.+..+.++
T Consensus       160 ~~~~igg--f~~~~~~~eD~~l~~rl~~~g~~~~~~~~  195 (202)
T cd04184         160 LVRQVGG--FREGFEGAQDYDLVLRVSEHTDRIAHIPR  195 (202)
T ss_pred             HHHHhCC--CCcCcccchhHHHHHHHHhccceEEEccH
Confidence            8877631  11223356899888877777877766553

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=89.91  E-value=5.2  Score=32.33  Aligned_cols=93  Identities=11%  Similarity=0.023  Sum_probs=45.9

Q ss_pred             EEEEcCCCCHHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCE-EEeeeccCCCCchHHHHHH
Q psy14347         49 YIVKSALRHFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDI-VQAKFIDSYFNNTIKTMMG  127 (316)
Q Consensus        49 i~V~S~~~~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DI-l~~d~~DsY~Nlt~K~~~~  127 (316)
                      +.|.|-+...+||..+++.....    +  +.+-|+-|-.. .......+......+... ......-+----.+..+.+
T Consensus         2 i~vInL~~~~~Rr~~~~~~~~~~----~--~~~~~~~Avd~-~~~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~lSH~~~   74 (128)
T cd06532           2 IFVINLDRSTDRRERMEAQLAAL----G--LDFEFFDAVDG-KDLSEEELAALYDALFLPRYGRPLTPGEIGCFLSHYKL   74 (128)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc----C--CCeEEEecccc-ccCCHHHHHHHhHHHhhhhcCCCCChhhHHHHHHHHHH
Confidence            45677788899999999865543    2  33455655543 111111222211100000 0000011111113455566


Q ss_pred             HHHHHHHCCCccEEEEeCCceEE
Q psy14347        128 FKWAANYCKHSKFYFFADDDFYV  150 (316)
Q Consensus       128 l~w~~~~c~~~~fvlk~DDD~~V  150 (316)
                      ++-+.+.  +.++.+-..||+.+
T Consensus        75 w~~~~~~--~~~~alIlEDDv~~   95 (128)
T cd06532          75 WQKIVES--NLEYALILEDDAIL   95 (128)
T ss_pred             HHHHHHc--CCCeEEEEccCcEE
Confidence            6666653  56788888888654

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=88.58  E-value=13  Score=30.84  Aligned_cols=101  Identities=11%  Similarity=-0.041  Sum_probs=57.3

Q ss_pred             HHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecCcCccC
Q psy14347        127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRH  206 (316)
Q Consensus       127 ~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~  206 (316)
                      +++...+.+ ..+|++..|+|..+..+-|...++...                         +...++.+.+....+.. 
T Consensus        70 ~~n~g~~~a-~g~~i~~lD~D~~~~~~~l~~~~~~~~-------------------------~~~~v~g~~~~~~~~~~-  122 (182)
T cd06420          70 IRNKAIAAA-KGDYLIFIDGDCIPHPDFIADHIELAE-------------------------PGVFLSGSRVLLNEKLT-  122 (182)
T ss_pred             HHHHHHHHh-cCCEEEEEcCCcccCHHHHHHHHHHhC-------------------------CCcEEecceeecccccc-
Confidence            345555554 689999999999998877776665421                         22222222221111000 


Q ss_pred             CCCCccccccCCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCcee
Q psy14347        207 YTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPF  271 (316)
Q Consensus       207 ~~~Kw~v~~~~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~  271 (316)
                                       .....|+++.+.++.+.++..-.........||+.++.-+.+.|+...
T Consensus       123 -----------------~~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~  170 (182)
T cd06420         123 -----------------ERGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFR  170 (182)
T ss_pred             -----------------eeEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEE
Confidence                             023457778888877764321111111223799999888888886553

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=86.42  E-value=1.9  Score=36.81  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=36.4

Q ss_pred             cccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeec
Q psy14347        223 WPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHC  273 (316)
Q Consensus       223 yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~  273 (316)
                      .+.++.|++.++++++++++.--.  -+....||..+|.-+.+.|.+....
T Consensus        68 ~~~~~~G~~~~~r~~~l~~vg~~~--~~~~~~ED~~l~~~l~~~G~~~~~~  116 (193)
T PF13632_consen   68 RPLFLSGSGMLFRREALREVGGFD--DPFSIGEDMDLGFRLRRAGYRIVYV  116 (193)
T ss_pred             CCccccCcceeeeHHHHHHhCccc--ccccccchHHHHHHHHHCCCEEEEe
Confidence            466789999999999999873111  1345569999999888888666443

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=85.09  E-value=25  Score=30.57  Aligned_cols=51  Identities=10%  Similarity=0.038  Sum_probs=34.2

Q ss_pred             cccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecCCc
Q psy14347        225 PYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCGEF  276 (316)
Q Consensus       225 ~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~~f  276 (316)
                      .++.|++.++++++++.+-.-.... .+..||+.+++-+.+.|.+....+.-
T Consensus       149 ~~~~~~~~~~rr~~~~~~ggfd~~~-~~~~eD~d~~~r~~~~G~~~~~~~~~  199 (237)
T cd02526         149 DFLITSGSLISLEALEKVGGFDEDL-FIDYVDTEWCLRARSKGYKIYVVPDA  199 (237)
T ss_pred             eeeeccceEEcHHHHHHhCCCCHHH-cCccchHHHHHHHHHcCCcEEEEcCe
Confidence            3556778899999988863111111 23468999998888889877665543

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=84.90  E-value=24  Score=34.70  Aligned_cols=35  Identities=11%  Similarity=0.113  Sum_probs=28.3

Q ss_pred             HHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhc
Q psy14347        126 MGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRN  161 (316)
Q Consensus       126 ~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~  161 (316)
                      .+++++.+++ +.+|++.+|+|..+..+.|.+.+..
T Consensus       121 ~AlN~gl~~s-~g~~v~~~DaD~~~~~d~L~~l~~~  155 (439)
T TIGR03111       121 KALNAAIYNS-IGKYIIHIDSDGKLHKDAIKNMVTR  155 (439)
T ss_pred             HHHHHHHHHc-cCCEEEEECCCCCcChHHHHHHHHH
Confidence            3667777765 6899999999999999888776654

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=84.57  E-value=7  Score=32.70  Aligned_cols=76  Identities=9%  Similarity=0.030  Sum_probs=44.2

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLR  157 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~  157 (316)
                      .+.++.+-+.+. +. ....++...+++..+.......   |.- | -.+++...+.+ ..+|++.+|+|.......|..
T Consensus        29 ~~eiivvdd~s~-d~-t~~~~~~~~~~~~~i~~i~~~~---n~G-~-~~a~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~  100 (181)
T cd04187          29 DYEIIFVDDGST-DR-TLEILRELAARDPRVKVIRLSR---NFG-Q-QAALLAGLDHA-RGDAVITMDADLQDPPELIPE  100 (181)
T ss_pred             CeEEEEEeCCCC-cc-HHHHHHHHHhhCCCEEEEEecC---CCC-c-HHHHHHHHHhc-CCCEEEEEeCCCCCCHHHHHH
Confidence            356666555544 33 2334444445565555554433   321 2 23445555555 569999999999998776666


Q ss_pred             HHhc
Q psy14347        158 FLRN  161 (316)
Q Consensus       158 ~L~~  161 (316)
                      .+..
T Consensus       101 l~~~  104 (181)
T cd04187         101 MLAK  104 (181)
T ss_pred             HHHH
Confidence            6553

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=82.57  E-value=6.7  Score=32.65  Aligned_cols=75  Identities=8%  Similarity=0.071  Sum_probs=45.5

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRF  158 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~  158 (316)
                      ..++.+-..+. + .....++....++..+..........     .-.++....+.. ..+|++..|+|..+.++.|.++
T Consensus        29 ~eiivvd~~s~-d-~~~~~~~~~~~~~~~~~~~~~~~n~G-----~~~a~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l  100 (185)
T cd04179          29 YEIIVVDDGST-D-GTAEIARELAARVPRVRVIRLSRNFG-----KGAAVRAGFKAA-RGDIVVTMDADLQHPPEDIPKL  100 (185)
T ss_pred             EEEEEEcCCCC-C-ChHHHHHHHHHhCCCeEEEEccCCCC-----ccHHHHHHHHHh-cCCEEEEEeCCCCCCHHHHHHH
Confidence            45554544443 3 33455555556666665554444332     123445555544 4599999999999998888877


Q ss_pred             Hhc
Q psy14347        159 LRN  161 (316)
Q Consensus       159 L~~  161 (316)
                      +..
T Consensus       101 ~~~  103 (185)
T cd04179         101 LEK  103 (185)
T ss_pred             HHH
Confidence            764

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=82.31  E-value=7.9  Score=32.65  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=24.7

Q ss_pred             HHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhc
Q psy14347        127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRN  161 (316)
Q Consensus       127 ~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~  161 (316)
                      +++++...-.+.++++.+|.|+.+.++.|...+..
T Consensus        71 g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~  105 (183)
T cd06438          71 GFRHLLNLADDPDAVVVFDADNLVDPNALEELNAR  105 (183)
T ss_pred             HHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHH
Confidence            44444321236899999999999998877766654

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=81.49  E-value=31  Score=36.39  Aligned_cols=46  Identities=11%  Similarity=0.005  Sum_probs=33.3

Q ss_pred             cccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeec
Q psy14347        225 PYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHC  273 (316)
Q Consensus       225 ~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~  273 (316)
                      ++|.|++.++.+++++++---  .. ..-.||..+|+.+.+.|.+....
T Consensus       305 ~~~~Gs~~~iRR~al~~iGGf--~~-~~vtED~~l~~rL~~~G~~~~y~  350 (713)
T TIGR03030       305 AFFCGSAAVLRREALDEIGGI--AG-ETVTEDAETALKLHRRGWNSAYL  350 (713)
T ss_pred             eeecCceeEEEHHHHHHcCCC--CC-CCcCcHHHHHHHHHHcCCeEEEe
Confidence            456799999999999876311  11 22379999999999888775443

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=80.80  E-value=35  Score=29.22  Aligned_cols=33  Identities=9%  Similarity=0.107  Sum_probs=24.2

Q ss_pred             HHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhc
Q psy14347        128 FKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRN  161 (316)
Q Consensus       128 l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~  161 (316)
                      ++...+.. ..+|++.+|+|..+.++.|...+..
T Consensus        70 ~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l~~~  102 (224)
T cd06442          70 YIEGFKAA-RGDVIVVMDADLSHPPEYIPELLEA  102 (224)
T ss_pred             HHHHHHHc-CCCEEEEEECCCCCCHHHHHHHHHH
Confidence            33333433 4589999999999998888777764

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=80.49  E-value=47  Score=32.00  Aligned_cols=193  Identities=7%  Similarity=-0.042  Sum_probs=104.8

Q ss_pred             eeEEEEEEcCCCCH-HHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHH
Q psy14347         45 IRVVYIVKSALRHF-ERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIK  123 (316)
Q Consensus        45 ~~lli~V~S~~~~~-~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K  123 (316)
                      +.+-|+|.+--++. -..+.++..=...    -....++.+...+.  ++..+.+++-.+++++.+.....   ..-...
T Consensus        54 p~vsviiP~ynE~~~~~~~~l~s~~~~d----yp~~evivv~d~~~--d~~~~~~~~~~~~~~~~~~~~~~---~~~~~g  124 (439)
T COG1215          54 PKVSVIIPAYNEEPEVLEETLESLLSQD----YPRYEVIVVDDGST--DETYEILEELGAEYGPNFRVIYP---EKKNGG  124 (439)
T ss_pred             CceEEEEecCCCchhhHHHHHHHHHhCC----CCCceEEEECCCCC--hhHHHHHHHHHhhcCcceEEEec---cccCcc
Confidence            45666776665544 3334444443322    11245555554333  34445566666666544444422   111222


Q ss_pred             HHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEee-cCc
Q psy14347        124 TMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVF-VSS  202 (316)
Q Consensus       124 ~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~-~~~  202 (316)
                      -..++.++.... ..++++..|-|+.+..+.|.+.+.....                        +.....+|... .+.
T Consensus       125 K~~al~~~l~~~-~~d~V~~~DaD~~~~~d~l~~~~~~f~~------------------------~~~~~v~~~~~~~~~  179 (439)
T COG1215         125 KAGALNNGLKRA-KGDVVVILDADTVPEPDALRELVSPFED------------------------PPVGAVVGTPRIRNR  179 (439)
T ss_pred             chHHHHHHHhhc-CCCEEEEEcCCCCCChhHHHHHHhhhcC------------------------CCeeEEeCCceeeec
Confidence            245677777765 5899999999999999999887775421                        11111111110 000


Q ss_pred             Cc-cCCCCCccc------c--ccCCC-CCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceee
Q psy14347        203 PH-RHYTSKWYI------S--LQEYP-YHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFH  272 (316)
Q Consensus       203 p~-r~~~~Kw~v------~--~~~y~-~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~  272 (316)
                      +. ....++-..      .  ..... ....+..|.|++.++.+++++++-   ...+..--||.-+++.++..|.+...
T Consensus       180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g---~~~~~~i~ED~~lt~~l~~~G~~~~~  256 (439)
T COG1215         180 PDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEVG---GWLEDTITEDADLTLRLHLRGYRVVY  256 (439)
T ss_pred             CChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHhC---CCCCCceeccHHHHHHHHHCCCeEEE
Confidence            00 000000000      0  00001 122577899999999999999875   22233345999999999988877654


Q ss_pred             cC
Q psy14347        273 CG  274 (316)
Q Consensus       273 ~~  274 (316)
                      .+
T Consensus       257 ~~  258 (439)
T COG1215         257 VP  258 (439)
T ss_pred             ee
Confidence            43

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=80.27  E-value=32  Score=31.20  Aligned_cols=33  Identities=9%  Similarity=-0.039  Sum_probs=25.8

Q ss_pred             HHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhc
Q psy14347        127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRN  161 (316)
Q Consensus       127 ~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~  161 (316)
                      +++++.+.  +.+|++..|||+.+..+.|...+..
T Consensus        65 Gi~~a~~~--~~d~i~~lD~D~~~~~~~l~~l~~~   97 (281)
T TIGR01556        65 GLDASFRR--GVQGVLLLDQDSRPGNAFLAAQWKL   97 (281)
T ss_pred             HHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHH
Confidence            66777652  6899999999999998777666653

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 34/241 (14%), Positives = 71/241 (29%), Gaps = 52/241 (21%)

Query: 47  VVYIVKSALR-HFERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERY 105
           +   VK+    H  R   +  +W      S +   T        +       + E    +
Sbjct: 15  IFIAVKTTWAFHRSRLDLLLDTWV-----SRIRQQTFIFTDSPDE------RLQERLGPH 63

Query: 106 NDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQY 165
             + Q     S+   + K    F          +++   DDD YV+ + +L+ L+     
Sbjct: 64  LVVTQCSAEHSHPALSCKMAAEFDA--FLVSGLRWFCHVDDDNYVNPKALLQLLKT---- 117

Query: 166 PQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLWPP 225
                                 P D  ++ G   ++ P      +     +   +     
Sbjct: 118 ---------------------FPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRF----W 152

Query: 226 YVTAGS-YVVSREVLLDF-------YFASHFTKHFRFDDIYLG-ILAKKTNTEPFHCGEF 276
           + T G+ + ++R++ L         +F          DD  +G I+  K          F
Sbjct: 153 FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLF 212

Query: 277 Y 277
           +
Sbjct: 213 H 213

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 6e-04
 Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 35/182 (19%)

Query: 94  LQIEIAEESERYNDIVQA---KFIDSYFNNTIKTMMGFKWAANYCKH--------SKFYF 142
           +  E  E   +Y DI+      F+D++    ++ M     +     H        S    
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 143 FADDDFYVSTRNVLRFLRNPLQ--YPQYLELPI--ETIQSKSNIMDYE-----LPSDVKL 193
                       V +F+   L+  Y  +L  PI  E  Q       Y      L +D ++
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYK-FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 194 FSGFVFVSSPHRHYTSKWYISLQEYPYHLWP-PYVT------AGSYVVSREVLLDFYFAS 246
           F+ +  VS          Y+ L++    L P   V       +G   V+ +V L +    
Sbjct: 126 FAKY-NVSRLQP------YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 247 HF 248
             
Sbjct: 179 KM 180

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.95
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	96.09
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	94.57
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	93.88
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	93.82
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	93.15
3bcv_A	240	Putative glycosyltransferase protein; protein stru	91.17
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	86.66
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	85.29
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	83.44
2c0n_A	203	A197; thermophil protein, thermophilic virus, STIV	80.44

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.95  E-value=4.2e-28  Score=223.57  Aligned_cols=207  Identities=17%  Similarity=0.160  Sum_probs=139.6

Q ss_pred             eeEEEEEEcCCCC-HHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeecc--CCCCch
Q psy14347         45 IRVVYIVKSALRH-FERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFID--SYFNNT  121 (316)
Q Consensus        45 ~~lli~V~S~~~~-~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~D--sY~Nlt  121 (316)
                      -+|+|+|+|++.+ .+||.+||+||++...  .    .+|+++... ++..    ...  ..+++++.++.+  ++.+++
T Consensus        13 ~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~--~----~~fifsd~~-d~~l----~~~--~~~~~~~~~~~~~~~~~~l~   79 (280)
T 2j0a_A           13 GDIFIAVKTTWAFHRSRLDLLLDTWVSRIR--Q----QTFIFTDSP-DERL----QER--LGPHLVVTQCSAEHSHPALS   79 (280)
T ss_dssp             GGEEEEEECCGGGTTTTHHHHHHTGGGGSG--G----GEEEEESSC-CHHH----HHH--HGGGEEECCC-------CCC
T ss_pred             ccEEEEEECcHHHHHHHHHHHHHHHhccCC--C----ceEEEcCCC-cccc----ccc--ccccceeccccccccccchH
Confidence            4689999999985 4577999999998754  1    134444433 3433    222  246788877644  678899


Q ss_pred             HHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecC
Q psy14347        122 IKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVS  201 (316)
Q Consensus       122 ~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~  201 (316)
                      .|+...+++...  ++++|++|+||||||++++|+++|...                         +++.++|+|.....
T Consensus        80 ~K~~~~~~~~l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~~-------------------------d~~~~~YiG~~~~~  132 (280)
T 2j0a_A           80 CKMAAEFDAFLV--SGLRWFCHVDDDNYVNPKALLQLLKTF-------------------------PQDRDVYVGKPSLN  132 (280)
T ss_dssp             HHHHHHHHHHHH--HTCSEEEEEETTEEECHHHHHHHHTTS-------------------------CTTSCCEEECEEC-
T ss_pred             HHHHHHHHHHhC--CCCcEEEEeCCCcEEcHHHHHHHHHhC-------------------------CCCCCEEEEEeccC
Confidence            999999987643  589999999999999999999999874                         36678999999877


Q ss_pred             cCccCCCCCccccccCCCCCCccccc-ccceEEecHHHHHHHHHHhccC-------CCCCCCchHHHHhhH-HcCCceee
Q psy14347        202 SPHRHYTSKWYISLQEYPYHLWPPYV-TAGSYVVSREVLLDFYFASHFT-------KHFRFDDIYLGILAK-KTNTEPFH  272 (316)
Q Consensus       202 ~p~r~~~~Kw~v~~~~y~~~~yP~y~-~G~~yvlS~~~~~~l~~~s~~~-------~~~~~eDv~~Gi~~~-k~gi~~~~  272 (316)
                      .|+|.   ++++|...++...|+ || +|+||+||++++++|+......       .....||+++|+|++ ++||++++
T Consensus       133 ~~~~~---~~~~~~~~~~~~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~  208 (280)
T 2j0a_A          133 RPIHA---SELQSKQRTKLVRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQP  208 (280)
T ss_dssp             ---------------------CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEE
T ss_pred             ccccc---cccCccccccccccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCcee
Confidence            77663   455554444444565 55 6789999999999999765432       223468999999998 99999999


Q ss_pred             cCCceecCCC---CCccccce--eEEEe
Q psy14347        273 CGEFYFYKKD---YSLHNYQY--VIASH  295 (316)
Q Consensus       273 ~~~f~~~~~~---~~~c~~~~--~i~~H  295 (316)
                      .++|+.+...   +.++.+..  .+++|
T Consensus       209 ~~~Fh~~~~~~~~~~~~~l~~~~~~s~~  236 (280)
T 2j0a_A          209 SPLFHSHLETLQLLGAAQLPEQVTLSYG  236 (280)
T ss_dssp             CTTCCCSSSCGGGCCTTTGGGCSEEECE
T ss_pred             cccccCCCchhccCCHHHhccCcceecc
Confidence            9999976542   45666544  44555

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=96.09  E-value=0.32  Score=46.51  Aligned_cols=197  Identities=6%  Similarity=0.014  Sum_probs=100.0

Q ss_pred             CeeEEEEEEcCCCC-HHHHHHHHHHhcCCcCCCCcCEEEEEEecCCCCChhHHHHHHHHHHHCC-CEEEeeeccCCCCch
Q psy14347         44 QIRVVYIVKSALRH-FERRLAIRQSWGYEKRFSDVPIVTVFILGYDPDNEGLQIEIAEESERYN-DIVQAKFIDSYFNNT  121 (316)
Q Consensus        44 ~~~lli~V~S~~~~-~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~~~~~~~~~~l~~E~~~~~-DIl~~d~~DsY~Nlt  121 (316)
                      .+.+-|+|.+--+. ...+..|+.--.+..  ......++.|-..+. ++...+.|++-.+.+. .+..+...+.   .-
T Consensus        28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~--~~~~~EIIvVDd~S~-d~~t~~~l~~~~~~~~~~v~vi~~~~n---~G  101 (472)
T 1xhb_A           28 LPTTSVVIVFHNEAWSTLLRTVHSVINRSP--RHMIEEIVLVDDASE-RDFLKRPLESYVKKLKVPVHVIRMEQR---SG  101 (472)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHSSC--GGGEEEEEEEECSCC-CGGGTHHHHHHHHSSSSCEEEEECSSC---CC
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHHHHHhcCc--HhHceEEEEEECCCC-cHHHHHHHHHHHHHCCCcEEEEECCCC---CC
Confidence            34556666665443 333333333222211  122245665554444 4445555666556676 4555544332   22


Q ss_pred             HHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEee--
Q psy14347        122 IKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVF--  199 (316)
Q Consensus       122 ~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~--  199 (316)
                        ...+.....+.. ..+|++..|+|+.+.++-|...+.....                        ......+|.+.  
T Consensus       102 --~~~a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~------------------------~~~~~v~~~~~~~  154 (472)
T 1xhb_A          102 --LIRARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH------------------------DRRTVVCPIIDVI  154 (472)
T ss_dssp             --HHHHHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH------------------------CTTEEEEEEEEEE
T ss_pred             --hHHHHHHHHHhc-cCCeEEEECCCeEeCccHHHHHHHHHHh------------------------CCCEEEEeeeeeE
Confidence              234555566665 6899999999999998877776654210                        01112222211  


Q ss_pred             cCc---------Ccc-----CCCCCcc-cccc-------CCCCCCcccccccceEEecHHHHHHHHHHhccCCCCCCCch
Q psy14347        200 VSS---------PHR-----HYTSKWY-ISLQ-------EYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDI  257 (316)
Q Consensus       200 ~~~---------p~r-----~~~~Kw~-v~~~-------~y~~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv  257 (316)
                      ...         ..+     ....+|. ++..       .......-+++.|+++++++++++++-.-.........||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~  234 (472)
T 1xhb_A          155 SDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENL  234 (472)
T ss_dssp             CSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCS
T ss_pred             cCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhH
Confidence            000         000     0000110 1100       00001223577899999999999886321112222347999


Q ss_pred             HHHHhhHHcCCceeec
Q psy14347        258 YLGILAKKTNTEPFHC  273 (316)
Q Consensus       258 ~~Gi~~~k~gi~~~~~  273 (316)
                      -+++-+.+.|.+....
T Consensus       235 dl~~R~~~~G~~i~~~  250 (472)
T 1xhb_A          235 EISFRIWQCGGTLEIV  250 (472)
T ss_dssp             HHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHhcCCeEEEc
Confidence            9988888888665543

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=94.57  E-value=1.1  Score=38.34  Aligned_cols=160  Identities=9%  Similarity=-0.052  Sum_probs=82.4

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCC-----CCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSY-----FNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVST  152 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY-----~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~  152 (316)
                      .+.++.+-..+. + ...+ +.++......|........-     .|.-  .-.+++.+.+.+ +.+|++..|+|.++.+
T Consensus        30 ~~eiivvDd~S~-d-~t~~-~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a~N~gi~~a-~g~~i~~lD~Dd~~~~  103 (255)
T 1qg8_A           30 DFELFIMDDNSN-E-ETLN-VIRPFLNDNRVRFYQSDISGVKERTEKTR--YAALINQAIEMA-EGEYITYATDDNIYMP  103 (255)
T ss_dssp             CEEEEEEECSCC-H-HHHH-HHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHHHHHHHHHC-CCSEEEEEETTEEECT
T ss_pred             ceEEEEEECCCC-c-hHHH-HHHHHhhcCCEEEEecccccccccccccC--HHHHHHHHHHHc-CCCEEEEeCCCCccCh
Confidence            466666655444 3 2222 33343334556554432100     2332  344667777776 7899999999999998


Q ss_pred             HHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeecC--cCccCCCCCccccccCCCCCCcccccccc
Q psy14347        153 RNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFVS--SPHRHYTSKWYISLQEYPYHLWPPYVTAG  230 (316)
Q Consensus       153 ~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~~--~p~r~~~~Kw~v~~~~y~~~~yP~y~~G~  230 (316)
                      +.|...+.....                       .+...+.+|.+...  .........+..|..... .....++.|+
T Consensus       104 ~~l~~~~~~~~~-----------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  159 (255)
T 1qg8_A          104 DRLLKMVRELDT-----------------------HPEKAVIYSASKTYHLNENRDIVKETVRPAAQVT-WNAPCAIDHC  159 (255)
T ss_dssp             THHHHHHHHHHH-----------------------CTTCCEEEEEEEEEEEC---CEEEEEEECCCSCB-SCCTTTSCGG
T ss_pred             HHHHHHHHHHHh-----------------------CCCceEEEeceEEEEeCCCCcchhhccCchHHHH-HhhcCCCccc
Confidence            877776654210                       12233444433210  000000001111111111 1234466789


Q ss_pred             eEEecHHHHHHHHHHh-----ccCCCCCCCchHHHHhhHHcC
Q psy14347        231 SYVVSREVLLDFYFAS-----HFTKHFRFDDIYLGILAKKTN  267 (316)
Q Consensus       231 ~yvlS~~~~~~l~~~s-----~~~~~~~~eDv~~Gi~~~k~g  267 (316)
                      +.++.+++++.+-..-     ........||..+..-+.+.|
T Consensus       160 ~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g  201 (255)
T 1qg8_A          160 SVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY  201 (255)
T ss_dssp             GEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred             eEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence            9999999999875111     012234579998876655555

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=93.88  E-value=0.42  Score=48.35  Aligned_cols=49  Identities=14%  Similarity=0.146  Sum_probs=36.2

Q ss_pred             ccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347        224 PPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG  274 (316)
Q Consensus       224 P~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~  274 (316)
                      ..|++|++.++.+++++.+--  ...-.+..||+-+++-+.+.|.+....+
T Consensus       362 v~~~~g~~~lirr~v~~~vGg--fd~~F~~~ED~Dl~lR~~~~G~ki~~~p  410 (657)
T 4fix_A          362 VDYNGWWTCMIPRQVAEELGQ--PLPLFIKWDDADYGLRAAEHGYPTVTLP  410 (657)
T ss_dssp             CSBCCTTEEEEEHHHHHHHCS--CCSCSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred             ccccchhHhHhhHHHHHHhCC--ChhHhccCcHHHHHHHHHHcCCeEEEEC
Confidence            458899999999999998631  2212345799999998888997765443

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=93.82  E-value=1.7  Score=42.92  Aligned_cols=76  Identities=9%  Similarity=0.052  Sum_probs=47.0

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRF  158 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~  158 (316)
                      ..++.|-..+. +.++.+.|++..+.+..|..+..... ..+    ..+.....+.. ..+|++..|+|+.+.++-|..+
T Consensus       145 ~EIIVVDDgS~-D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~----~~A~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~l  217 (570)
T 2d7i_A          145 AEIVLVDDFSD-REHLKKPLEDYMALFPSVRILRTKKR-EGL----IRTRMLGASVA-TGDVITFLDSHCEANVNWLPPL  217 (570)
T ss_dssp             EEEEEEECSCC-CGGGTHHHHHHHTTSTTEEEEECSSC-CCH----HHHHHHHHHHC-CSSEEEECCSSEEECTTCSHHH
T ss_pred             EEEEEEECCCC-cHHHHHHHHHHHHhCCeEEEEECCCC-CCH----HHHHHHHHHhc-CCCEEEEEcCCccccccHHHHH
Confidence            35665554454 55545566666666766665544332 122    23455555555 6799999999999988766655


Q ss_pred             Hhc
Q psy14347        159 LRN  161 (316)
Q Consensus       159 L~~  161 (316)
                      +..
T Consensus       218 l~~  220 (570)
T 2d7i_A          218 LDR  220 (570)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=93.15  E-value=2.3  Score=40.89  Aligned_cols=72  Identities=10%  Similarity=0.036  Sum_probs=44.6

Q ss_pred             EEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHH
Q psy14347         79 IVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRF  158 (316)
Q Consensus        79 v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~  158 (316)
                      ..+++|-..+. +.+..    ...+.+..+-.+....   |.-  ...+.....+.. ..+|++..|+|+.+.++-|..+
T Consensus        99 ~EIIvVDDgS~-D~t~~----~~~~~~~~v~vi~~~~---n~G--~~~A~N~G~~~A-~gd~i~flD~D~~~~p~~L~~l  167 (501)
T 2ffu_A           99 KEIILVDDYSN-DPEDG----ALLGKIEKVRVLRNDR---REG--LMRSRVRGADAA-QAKVLTFLDSHCECNEHWLEPL  167 (501)
T ss_dssp             EEEEEEECSCS-CTHHH----HGGGGBTTEEEEECSS---CCH--HHHHHHHHHHHC-CSSEEEECCSSEEECTTCHHHH
T ss_pred             eeEEEEECCCC-chHHH----HHHhcCCCEEEEECCC---CcC--HHHHHHHHHHhc-CCCEEEEECCCcccCccHHHHH
Confidence            46666655554 44432    2234556665554333   332  234556666666 6899999999999998877776


Q ss_pred             Hhc
Q psy14347        159 LRN  161 (316)
Q Consensus       159 L~~  161 (316)
                      +..
T Consensus       168 l~~  170 (501)
T 2ffu_A          168 LER  170 (501)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=91.17  E-value=1.9  Score=36.45  Aligned_cols=75  Identities=16%  Similarity=0.202  Sum_probs=48.2

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLR  157 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~  157 (316)
                      .+.++.|-..+. +. ..+.+++-.+++..|.... .+   |.-  .-.+.+...+.+ ..+|++.+|+|.++.++.|..
T Consensus        34 ~~eiIvvDd~S~-d~-t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a-~g~~i~~lD~Dd~~~~~~l~~  104 (240)
T 3bcv_A           34 DIEIILIDDESP-DN-CPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVA-TGEYVAFCDSDDYVDSDMYMT  104 (240)
T ss_dssp             SEEEEEEECCCS-SS-HHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHC-CSSEEEECCTTCCCCTTHHHH
T ss_pred             CeEEEEEECCCC-cC-HHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHc-CCCEEEEECCCCcCCHHHHHH
Confidence            466666655444 33 3445555556677776664 22   332  234556666666 679999999999999887777


Q ss_pred             HHhc
Q psy14347        158 FLRN  161 (316)
Q Consensus       158 ~L~~  161 (316)
                      .+..
T Consensus       105 l~~~  108 (240)
T 3bcv_A          105 MYNV  108 (240)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=86.66  E-value=13  Score=38.10  Aligned_cols=124  Identities=13%  Similarity=0.032  Sum_probs=68.1

Q ss_pred             hHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEee-
Q psy14347        121 TIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVF-  199 (316)
Q Consensus       121 t~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~-  199 (316)
                      ..|.- +++...+.+ +.+|++.+|+|+.+..+.|.+.+.....                       +++..+.+|... 
T Consensus       224 ~GKa~-alN~gl~~a-~gd~Il~lDaD~~~~pd~L~~lv~~~~~-----------------------dp~v~~V~~~~~~  278 (802)
T 4hg6_A          224 HAKAG-NMSAALERL-KGELVVVFDADHVPSRDFLARTVGYFVE-----------------------DPDLFLVQTPHFF  278 (802)
T ss_dssp             SHHHH-HHHHHHHHC-CCSEEEECCTTEEECTTHHHHHHHHHHH-----------------------SSSCCEEECCCCB
T ss_pred             CcchH-HHHHHHHhc-CCCEEEEECCCCCcChHHHHHHHHHHhc-----------------------CCCeEEEeccEEE
Confidence            34443 567777776 7899999999999998887776654210                       122333433322 


Q ss_pred             -cCcCccCCCCCcc-cccc---CCC------CCCcccccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCC
Q psy14347        200 -VSSPHRHYTSKWY-ISLQ---EYP------YHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNT  268 (316)
Q Consensus       200 -~~~p~r~~~~Kw~-v~~~---~y~------~~~yP~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi  268 (316)
                       +..|.....+.+. ++.+   .|.      ...--+++.|++.++.+++++++-   ......-.||..++.-+.+.|.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vG---gf~~~~~~ED~~l~~rl~~~G~  355 (802)
T 4hg6_A          279 INPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAG---GFAGETITEDAETALEIHSRGW  355 (802)
T ss_dssp             SSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHT---TCCCSSSSHHHHHHHHHHTTTC
T ss_pred             eCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcC---CcCCCCcchHHHHHHHHHHcCC
Confidence             1111000000000 0000   000      000113467999999999999762   1111223599999999888887


Q ss_pred             ceee
Q psy14347        269 EPFH  272 (316)
Q Consensus       269 ~~~~  272 (316)
                      +...
T Consensus       356 ri~~  359 (802)
T 4hg6_A          356 KSLY  359 (802)
T ss_dssp             CEEE
T ss_pred             eEEE
Confidence            6543

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=85.29  E-value=9.5  Score=37.48  Aligned_cols=75  Identities=11%  Similarity=-0.004  Sum_probs=46.8

Q ss_pred             CEEEEEEecCCCCChhHHHHHHHHHHHCCCEEEeeeccCCCCchHHHHHHHHHHHHHCCCccEEEEeCCceEEeHHHHHH
Q psy14347         78 PIVTVFILGYDPDNEGLQIEIAEESERYNDIVQAKFIDSYFNNTIKTMMGFKWAANYCKHSKFYFFADDDFYVSTRNVLR  157 (316)
Q Consensus        78 ~v~~vFvlG~~~~~~~~~~~l~~E~~~~~DIl~~d~~DsY~Nlt~K~~~~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~  157 (316)
                      .+.++.+-..+. |. ..+.+++-.+.+..|.... .   .|.-  .-.+++...+.+ ..+|++..|+|.++.++.|..
T Consensus       404 ~~eiivvdd~S~-d~-t~~~~~~~~~~~~~i~~~~-~---~n~G--~~~a~n~g~~~a-~g~~i~~ld~D~~~~~~~l~~  474 (625)
T 2z86_A          404 DLEVCICDDGST-DD-TLRILQEHYANHPRVRFIS-Q---KNKG--IGSASNTAVRLC-RGFYIGQLDSDDFLEPDAVEL  474 (625)
T ss_dssp             SEEEEEEEESCS-SS-HHHHHHHHHTTCTTEEEEE-E---CCCC--HHHHHHHHHHHC-CSSEEEECCTTCEECTTHHHH
T ss_pred             CeEEEEEECcCC-hh-HHHHHHHHHhhCCcEEEEe-C---CCCC--HHHHHHHHHHhc-CCCEEEEECCCcccChhHHHH
Confidence            466666655554 43 3344544445566666553 2   2332  234556666666 779999999999999888877


Q ss_pred             HHhc
Q psy14347        158 FLRN  161 (316)
Q Consensus       158 ~L~~  161 (316)
                      .+..
T Consensus       475 ~~~~  478 (625)
T 2z86_A          475 CLDE  478 (625)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6653

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=83.44  E-value=19  Score=35.24  Aligned_cols=45  Identities=9%  Similarity=-0.018  Sum_probs=32.3

Q ss_pred             ccccceEEecHHHHHHHHHHhccCCCC--CCCchHHHHhhHHcCCceee
Q psy14347        226 YVTAGSYVVSREVLLDFYFASHFTKHF--RFDDIYLGILAKKTNTEPFH  272 (316)
Q Consensus       226 y~~G~~yvlS~~~~~~l~~~s~~~~~~--~~eDv~~Gi~~~k~gi~~~~  272 (316)
                      ++.|++.++++++++.+-  ......+  ..||.-+++-+.+.|.+...
T Consensus       275 ~~~g~~~~~rr~~l~~iG--gfde~~~~~g~ED~dl~~Rl~~~G~~i~~  321 (625)
T 2z86_A          275 FFSGGNVAFAKKWLFRAG--WFDEEFTHWGGEDNEFGYRLYREGCYFRS  321 (625)
T ss_dssp             GCCTTEEEEETHHHHHHC--CCCTTCSSCCCHHHHHHHHHHHTTCEEEE
T ss_pred             EEeeceeeeEHHHHHHhC--CCccccccCCcchhhhhhhHHhCCceEEE
Confidence            578999999999999872  1222222  36999999888888865543

>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}

Probab=80.44  E-value=9.6  Score=32.47  Aligned_cols=131  Identities=11%  Similarity=0.130  Sum_probs=72.9

Q ss_pred             HHHHHHHHCCCEEEeeeccCCCCchH-HHHHHHHHHHHHCCCccEEEEeCCc---eEEeHHHHHHHHhcCCCCCcccccc
Q psy14347         97 EIAEESERYNDIVQAKFIDSYFNNTI-KTMMGFKWAANYCKHSKFYFFADDD---FYVSTRNVLRFLRNPLQYPQYLELP  172 (316)
Q Consensus        97 ~l~~E~~~~~DIl~~d~~DsY~Nlt~-K~~~~l~w~~~~c~~~~fvlk~DDD---~~Vn~~~L~~~L~~~~~~~~~l~~~  172 (316)
                      .|+.+..+.|==+++.+.++  .++. .-.+.=+|+.+  .++++++.+|-|   .-.+++.+.++|..           
T Consensus        16 ~l~~~l~~~gi~~~l~~~~S--lI~raRN~lv~~Fl~~--~~~dhllfIDAD~~~I~FdPe~V~rLl~~-----------   80 (203)
T 2c0n_A           16 PLIDFLVKNDIEYVILSRRN--HVAVQREIALDMFLEM--KDYDTLAFLDEDVVPIEIDFQKVEAKFNE-----------   80 (203)
T ss_dssp             HHHHHHHHTTCCEEEECCCS--CHHHHHHHHHHHHHHC--TTCCEEEEECTTEEEEECCHHHHHHHHHH-----------
T ss_pred             HHHHHHHhCCCeEEEEcccc--chHHHHHHHHHHHHhc--CCCCEEEEEeCCCCccccCHHHHHHHHhC-----------
Confidence            35555555553344444422  2222 22222335554  378999999999   99999999999964           


Q ss_pred             hhhhhccccccccCCCCCcceEEEEeecCcCccCCCCCccccccCCCCCCc---ccccccceEEecHHHHHHHHHHhcc-
Q psy14347        173 IETIQSKSNIMDYELPSDVKLFSGFVFVSSPHRHYTSKWYISLQEYPYHLW---PPYVTAGSYVVSREVLLDFYFASHF-  248 (316)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~ly~G~~~~~~p~r~~~~Kw~v~~~~y~~~~y---P~y~~G~~yvlS~~~~~~l~~~s~~-  248 (316)
                                       ..++.+|...    .+... +...-...|.....   -.||++|+-++++++++.|.+.... 
T Consensus        81 -----------------g~DVV~GsYp----~K~~~-~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~  138 (203)
T 2c0n_A           81 -----------------GYDVVCGYYY----LKTLR-GYSVYRKDWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLA  138 (203)
T ss_dssp             -----------------TCSEEEEECB----CTTSS-SBSEESSSBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC
T ss_pred             -----------------CCCEEEEEee----ccCCC-ccchHHHHHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhc
Confidence                             2467777643    21100 00000112322211   1488889999999999998655431 


Q ss_pred             -----CCCCCCCchHHHHhhH
Q psy14347        249 -----TKHFRFDDIYLGILAK  264 (316)
Q Consensus       249 -----~~~~~~eDv~~Gi~~~  264 (316)
                           .+-.--|||++=..++
T Consensus       139 ~~~~e~~~~~gEdv~F~~~~k  159 (203)
T 2c0n_A          139 FKPIESPHWIGEDVYFFSTHK  159 (203)
T ss_dssp             ---------CCHHHHHHHHHC
T ss_pred             CChhhhccccCCceEEEeccc
Confidence                 1122347888754444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	94.09

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.09  E-value=0.57  Score=39.99  Aligned_cols=50  Identities=6%  Similarity=0.040  Sum_probs=34.9

Q ss_pred             cccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347        225 PYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG  274 (316)
Q Consensus       225 ~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~  274 (316)
                      +++.|+++++++++...+-.-.........||+-+++-+.+.|......|
T Consensus       195 ~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p  244 (328)
T d1xhba2         195 PTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVT  244 (328)
T ss_dssp             SBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred             ceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeC
Confidence            46789999999999998632111222234799999888888887665444