Psyllid ID: psy14443

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
MESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQHNYFE
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHcccccccccccHHHccHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHcccccccccccccccccccccccccccEccccccccccEcEEEEEEccccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKlfnkkvfnskspsskfkehenknfkrenknrpreisskipqkkfaqqsapvipvqkniprdprfdslcgtfkeKAFHSAYKFIDDIREKEISILKKKLkkeknpeeKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKhgekplfrkKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQHNYFE
Flexible Loop (DISEMBL)
MESSDIDEERVAIreelkgltfeqLQKLKEemgtklfnkkvfnskspsskfkehenknfkrenknrpreisskipqkkfaqqsapvipvqkniprdPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILkkklkkeknpeekekVKYLVQRMENQMREAKqrhekdqqekEEHTARIQalkhgekplfrkksekTMLNLVQKFetlkktgkinkhiekktkalkakersqhnyfe
Low Complexity Region (SEG)
MESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSkfkehenknfkrenknrpreISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRekeisilkkklkkeknpeekekvkYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQHNYFE
Disordered region (IsUnstruct)
*************************************************************************************************RFDSLCGTFKEKAFHSAYKFIDDIREKEISIL**********************************************************************************************************
Disordered Region (DISOPRED)
*******************LTFEQ**********************************************************************RDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI****************************************************************KSEKTM***********************************N***
Disordered Region (DISEMBL)
********ERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNS****************************************PVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMEN**********************IQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKK****************
Disordered Region (DISPRO)
*******EERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFN******************************IPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKA********F*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQHNYFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	235	2.2.26 [Sep-21-2011]
A6QNR1	246	Ribosomal RNA processing	yes	N/A	0.923	0.882	0.357	5e-28
Q96EU6	259	Ribosomal RNA processing	yes	N/A	0.897	0.814	0.371	7e-27
Q3UFY0	244	Ribosomal RNA processing	yes	N/A	0.906	0.872	0.326	7e-23
A7SL20	247	Ribosomal RNA processing	N/A	N/A	0.872	0.829	0.334	3e-20
C7YTL6	310	rRNA biogenesis protein R	N/A	N/A	0.795	0.603	0.309	2e-15
Q0V389	331	rRNA biogenesis protein R	N/A	N/A	0.6	0.425	0.372	7e-15
C9S8J9	299	rRNA biogenesis protein R	N/A	N/A	0.693	0.545	0.356	3e-14
A7E4K0	301	rRNA biogenesis protein r	N/A	N/A	0.697	0.544	0.350	1e-13
A6RKG5	300	rRNA biogenesis protein r	N/A	N/A	0.697	0.546	0.338	5e-13
D5GA77	316	rRNA biogenesis protein R	N/A	N/A	0.714	0.531	0.327	1e-11

>sp|A6QNR1|RRP36_BOVIN Ribosomal RNA processing protein 36 homolog OS=Bos taurus GN=RRP36 PE=2 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 137/232 (59%), Gaps = 15/232 (6%)

Query: 2   ESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKR 61
           E+ D  E+  ++R +   ++FE+L +L+ ++GTK + + V  S +     +    K    
Sbjct: 17  EAQDGGEDDGSLRNDTSHMSFEELLELQSQVGTKAYKQLVTGSSTKKQSSRPPVQKGCV- 75

Query: 62  ENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDI 121
            +K+RP E+S+K+ +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F+DDI
Sbjct: 76  ADKHRPLEMSAKV-RVPFLRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLDDI 131

Query: 122 REKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQE-----KEEHTAR 176
           R +E  ++KK+LKK ++ EE EK+++L+QRME Q  E  Q+  K QQE     K+E  A+
Sbjct: 132 RAREKELVKKQLKKHRSGEEHEKLQHLLQRMEQQ--EMAQKERKRQQELRLALKQERRAQ 189

Query: 177 IQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
            Q    G +P F KKSE+  L L +KF+ LK++ K+   + +K +    K+R
Sbjct: 190 AQ---QGHRPYFLKKSEQRQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDR 238

Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA.
Bos taurus (taxid: 9913)

>sp|Q96EU6|RRP36_HUMAN Ribosomal RNA processing protein 36 homolog OS=Homo sapiens GN=RRP36 PE=1 SV=1

 Score =  120 bits (301), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 134/229 (58%), Gaps = 18/229 (7%)

Query: 8   EERVAIREELKG---LTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENK 64
           E     R+ L+G   ++FE+L +L+ ++GTK + K++    SP  +      +N    +K
Sbjct: 33  EPAAVARDLLRGTSNMSFEELLELQSQVGTKTY-KQLVAGNSPKKQASRPPIQNACVADK 91

Query: 65  NRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREK 124
           +RP E+S+KI +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F++DIR K
Sbjct: 92  HRPLEMSAKI-RVPFLRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLNDIRAK 147

Query: 125 EISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQE-----KEEHTARIQA 179
           E  ++KK+LKK  + EE EK++ L+QRME Q  E  Q+  K QQE     K+E  A+ Q 
Sbjct: 148 EKELVKKQLKKHLSGEEHEKLQQLLQRMEQQ--EMAQQERKQQQELHLALKQERRAQAQ- 204

Query: 180 LKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
              G +P F KKSE+  L L +KF+ LK++ K+   + +K +    K+R
Sbjct: 205 --QGHRPYFLKKSEQRQLALAEKFKELKRSKKLENFLSRKRRRNAGKDR 251

Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA.

Homo sapiens (taxid: 9606)

>sp|Q3UFY0|RRP36_MOUSE Ribosomal RNA processing protein 36 homolog OS=Mus musculus GN=Rrp36 PE=2 SV=1

 Score =  107 bits (267), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 136/233 (58%), Gaps = 20/233 (8%)

Query: 1   MESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFK 60
           ME  ++  +R  ++ +   ++FE+L +L+ + G    +K++    S  ++  +   +   
Sbjct: 19  MEGGEVTGDR--LKADTPDVSFEELLRLQGQ-GRPKAHKQLVAGNSTRTRSPQ---QPVC 72

Query: 61  RENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDD 120
             +K+RP E+S+K+ +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F++D
Sbjct: 73  VADKHRPLEMSAKV-RVPFLRQ---VVPISKKVARDPRFDDLSGDYNPEVFDKTYQFLND 128

Query: 121 IREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQE-----KEEHTA 175
           IR KE  ++KK+LK+ ++ EE++K++ L+QRME Q  E  Q+  K QQE     K+E  A
Sbjct: 129 IRAKEKQLVKKQLKRHRSGEERDKLQQLLQRMEQQ--EMAQQERKQQQELRLALKQERRA 186

Query: 176 RIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
           + Q    G +P F KKSE+  L L +KF+ L+++ K+   + +K +    K+R
Sbjct: 187 QAQ---QGHRPYFLKKSEQRQLALAEKFKELRRSKKLESFLSRKRRRNAGKDR 236

Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA.

Mus musculus (taxid: 10090)

>sp|A7SL20|RRP36_NEMVE Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis GN=v1g245966 PE=3 SV=1

 Score = 99.0 bits (245), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 126/221 (57%), Gaps = 16/221 (7%)

Query: 13  IREELKGLTFEQLQKLKEEMGTKLFNKKVFN-SKSPSSKFKEHENKNFKRENKNRPREIS 71
           +++EL  + F +LQ LK+++G+K +N  +    +  +    + E K  K++NK  P+E+S
Sbjct: 27  LKDELSQIPFCELQDLKDKIGSKKYNLAIHGIMEERTQGIPDLETK--KKKNKG-PQELS 83

Query: 72  SKIPQKKFAQQSAP----VIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEIS 127
           SK        Q  P    V+ V+K + RDPRFD L G F E  F  +Y F++DIR +E  
Sbjct: 84  SK--------QRVPKLRKVVQVKKKMGRDPRFDDLSGKFNEDLFRKSYSFVNDIRVEEKK 135

Query: 128 ILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPL 187
            ++K+LKK KN E+++ +  L++ M  Q R  K    K + +K+      + ++ G+KP 
Sbjct: 136 SVEKELKKTKNAEKRKNLNDLLKVMNQQERSRKSAEAKRESKKKIKETERELVQKGKKPF 195

Query: 188 FRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
           + +KSE   L L +K++ LK  GK+ K++ K+ K   +K+R
Sbjct: 196 YLRKSELKKLELAEKYKELKSKGKLQKYLTKRRKKTASKDR 236

Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA.

Nematostella vectensis (taxid: 45351)

>sp|C7YTL6|RRP36_NECH7 rRNA biogenesis protein RRP36 OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=RRP36 PE=3 SV=1

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 43  NSKSPSSKFKEHENKNFKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSL 102
            + +P    +  ++   KR +K+ P+E +SK P  +  +    ++P  +   RDPRFD L
Sbjct: 117 TTPAPRKSTRSKDDPKPKRSSKHAPQEQTSKKPVSRRRE----ILPDNRRQYRDPRFDPL 172

Query: 103 CGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQR 162
            G   E+    AY F+D+ REKE+S L+ ++KK K+   KE +K  +Q ME++ ++A++R
Sbjct: 173 VGKVDEEKASKAYAFLDEYREKEMSDLRAQIKKTKDTYAKEDMKRQLQAMESR-KKARKR 231

Query: 163 HEKDQQEKEEHTARIQAL-KHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTK 221
            E+++   +EH  + + L   G+ P + K+SE+    LV+++E + K G++++ IE+K K
Sbjct: 232 KEEEENLLKEHRKKEKELVAQGKTPFYLKRSEQKKQILVKRYEGMSK-GQVDRAIERKRK 290

Query: 222 ALKAKERSQHNYFE 235
            +  KE+ + ++ +
Sbjct: 291 KVAGKEKKELDWLQ 304

Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.

Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) (taxid: 660122)

>sp|Q0V389|RRP36_PHANO rRNA biogenesis protein RRP36 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=RRP36 PE=3 SV=2

 Score = 80.9 bits (198), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 4/145 (2%)

Query: 86  VIPVQKNIPRDPRFDSLCGTF-KEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEK 144
           V+ V+K + RDPRFD++ G    +    + Y F++D R  EI+ L++ +KK KN  EKE+
Sbjct: 180 VVDVKKPVFRDPRFDNMGGAAPDDNTLGNRYSFLNDYRASEIAELRRTIKKSKNEGEKER 239

Query: 145 VKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQAL-KHGEKPLFRKKSEKTMLNLVQKF 203
           +K  +  ME+Q + A++  EK Q+   EH  + + L K G++P F KKSE+  L L+ +F
Sbjct: 240 LKKQLLSMESQQK-ARENKEKHQEVIREHKKKEKELVKQGKQPFFLKKSEQKKLALIDRF 298

Query: 204 ETLKKTGKINKHIEKKTKALKAKER 228
           + + K+ +++K IE++ K + +KER
Sbjct: 299 QNM-KSKQLDKVIERRRKKVTSKER 322

Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.

Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (taxid: 321614)

>sp|C9S8J9|RRP36_VERA1 rRNA biogenesis protein RRP36 OS=Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) GN=RRP36 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 104/174 (59%), Gaps = 11/174 (6%)

Query: 60  KRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFD----SLCGTFKEKAFHSAY 115
           KR +K+ P E+SSK P      +   +  V K   RDPRFD    S    F E     AY
Sbjct: 123 KRSSKHAPTEMSSKRP----VSRKREIFQVPKVEARDPRFDPAVNSGGSNFDEAKAKKAY 178

Query: 116 KFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTA 175
            F+D+ R+ E++ L+ +++K K+  +KE+++ L+Q M+N+ + AK R + +++  EEH  
Sbjct: 179 AFLDEYRDSEMAELRMEIRKTKDAAQKERLQTLLQSMQNRKKAAK-RKDDEKRILEEHRQ 237

Query: 176 RIQAL-KHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
           R + L + G++P + KKSE+    L ++F+ +KK  ++NK IE+K K + AKE+
Sbjct: 238 REKDLVQQGKQPFYLKKSEQKKRLLTEQFKGMKKK-QVNKVIERKRKKVAAKEK 290

Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.

Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (taxid: 526221)

>sp|A7E4K0|RRP36_SCLS1 rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rrp36 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 13/177 (7%)

Query: 55  ENKNFKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSA 114
           + ++F R +KN P EISSK    K   +   V+PV+K   RDPRFD   G          
Sbjct: 122 DQRDFTRSSKNAPTEISSK----KAVSRRREVVPVKKREIRDPRFDPTHGPVDMGKIEKV 177

Query: 115 YKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMR-EAKQRHEK---DQQEK 170
           Y F+ D RE EI  L+K +KK K+ +EKEK+K  +  ME++ + +AK+R  +   D+  K
Sbjct: 178 YDFLVDYREDEIKKLRKTIKKTKDEDEKEKLKRDLLSMESRKKTDAKKRKAREILDKHRK 237

Query: 171 EEHTARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKE 227
           EE     + +K G+ P + KK+E+    L+  +  LK   ++++ IE++ K ++ KE
Sbjct: 238 EEK----ELVKEGKTPYYLKKAEQKKRVLLDTYGELKGR-QLDRVIERRRKKVEGKE 289

Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.

Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (taxid: 665079)

>sp|A6RKG5|RRP36_BOTFB rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp36 PE=3 SV=1

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 13/177 (7%)

Query: 55  ENKNFKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSA 114
           + ++F R +KN P E+SSK    K   +   V+PV+K   RDPRF+   G    +     
Sbjct: 121 DQRDFTRSSKNAPTEVSSK----KAVSRRREVVPVKKREIRDPRFEPTNGPVDMQKIEKN 176

Query: 115 YKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQ----MREAKQRHEKDQQEK 170
           Y F+ D RE E+  LK+ ++K K+ +EKEK+K  + RME++     R+ K R   D+  K
Sbjct: 177 YDFLVDYREDEMKKLKETIRKTKDEDEKEKLKRELLRMESRKKTDARKRKAREVLDKHRK 236

Query: 171 EEHTARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKE 227
           EE     + +K G+ P + KK+E+    L+  F  LK   ++++ IE++ K ++ KE
Sbjct: 237 EEK----ELVKEGKTPYYLKKAEQKKRVLLDTFGELKGR-QLDRVIERRRKKVEGKE 288

Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.

Botryotinia fuckeliana (strain B05.10) (taxid: 332648)

>sp|D5GA77|RRP36_TUBMM rRNA biogenesis protein RRP36 OS=Tuber melanosporum (strain Mel28) GN=RRP36 PE=3 SV=1

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 97/171 (56%), Gaps = 3/171 (1%)

Query: 59  FKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLC-GTFKEKAFHSAYKF 117
            KR +K+ P+EISSK    +  +++   I       RDPRFD+   G + EK F   Y F
Sbjct: 138 LKRSSKHAPQEISSKRAVTR-RREAVAPIIPAAQAARDPRFDTAVKGVYDEKVFRKNYSF 196

Query: 118 IDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARI 177
           +DD RE E+  LK+++ K K+ +++E++K  +  ME++ +  K + + ++  +E      
Sbjct: 197 LDDYREDEMKALKQEIFKSKDEQKREQLKKELLSMESRRKTEKNKEQGEKVVREHRKRER 256

Query: 178 QALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
           + +K G+KP + KK+E+  L L +K+  L +  ++ K +EKK K    KER
Sbjct: 257 ELIKQGKKPFYLKKAEQKKLLLAEKYSKLNEK-QLEKVLEKKRKRNSQKER 306

Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.

Tuber melanosporum (strain Mel28) (taxid: 656061)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
350409628	232	PREDICTED: ribosomal RNA processing prot	0.859	0.870	0.476	8e-47
307177451	231	UPF0399 protein v1g245966 [Camponotus fl	0.906	0.922	0.5	1e-46
340713855	232	PREDICTED: ribosomal RNA processing prot	0.834	0.844	0.485	9e-45
307201504	230	UPF0399 protein C6orf153-like protein [H	0.855	0.873	0.462	5e-44
383859881	230	PREDICTED: ribosomal RNA processing prot	0.855	0.873	0.457	4e-43
322795169	235	hypothetical protein SINV_06833 [Solenop	0.919	0.919	0.466	2e-42
380024950	231	PREDICTED: ribosomal RNA processing prot	0.855	0.870	0.466	2e-40
332025686	220	UPF0399 protein C6orf153-like protein [A	0.897	0.959	0.467	2e-40
110756615	231	PREDICTED: ribosomal RNA processing prot	0.855	0.870	0.462	2e-40
189239493	231	PREDICTED: similar to GA21095-PA [Tribol	0.906	0.922	0.451	6e-39

>gi|350409628|ref|XP_003488798.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Bombus impatiens]

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 153/212 (72%), Gaps = 10/212 (4%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D+++  IR+EL  ++FE LQKLKE++G K++ + +F  +  + K +      FKRENKNR
Sbjct: 12  DKDQDEIRKELSQMSFEDLQKLKEKLGCKIYKEALFGPRKVNKKTE------FKRENKNR 65

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PREISSK P  +F +    V+ V+  +PRDPRFD+LCG +  K F   Y FI+DI+E +I
Sbjct: 66  PREISSKKPVSRFRE----VVQVKNYVPRDPRFDNLCGIYDPKKFKRNYMFINDIKENDI 121

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
             LKKKL + ++P+E +K+KYL+QR+ENQ+RE K+R+ K+Q+E  E    I+A++ GEKP
Sbjct: 122 KELKKKLVESRDPKEIKKIKYLIQRLENQLREEKRRNMKEQKEYAEKKEIIEAIRRGEKP 181

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEK 218
           ++RKKSEK +L+L+ ++E LK +GK+ KHI++
Sbjct: 182 VYRKKSEKRVLDLISQYEELKNSGKLKKHIQR 213

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177451|gb|EFN66578.1| UPF0399 protein v1g245966 [Camponotus floridanus]

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 11/224 (4%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D ER  IREELK ++FE LQKLKE++GTK++N+ +F +KS            FKRENKNR
Sbjct: 12  DNEREQIREELKHMSFEDLQKLKEKLGTKMYNQAIFGNKSKRKT-------EFKRENKNR 64

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE+S+K P  +F +     + V+K + RDPRFDSLCGTF EKAF +AY FI+++RE ++
Sbjct: 65  PREMSAKKPVSRFKES----VSVKKVVARDPRFDSLCGTFNEKAFKTAYAFINNLRENDL 120

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
             LK +L +  +P+ K K+KYL+QR+ENQ+RE K+R EK+++E+EE    +  +K GEKP
Sbjct: 121 KTLKHELNETTDPKTKAKIKYLIQRLENQLREEKKRKEKEKKEREEKKEVLDTIKQGEKP 180

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQ 230
            F+KKSEK +LNLV ++E LK  G + KHI++  K  K K+R++
Sbjct: 181 AFKKKSEKKVLNLVSQYEELKNKGNLKKHIQRLRKKNKHKDRAK 224

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713855|ref|XP_003395450.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Bombus terrestris]

 Score =  186 bits (471), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/206 (48%), Positives = 148/206 (71%), Gaps = 10/206 (4%)

Query: 13  IREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNRPREISS 72
           IR+EL  ++FE LQKLKE++G K++ + +F  +  + K +      FKRENKNRPREISS
Sbjct: 18  IRKELSQMSFEDLQKLKEKLGCKIYKEALFGPRKVNKKIE------FKRENKNRPREISS 71

Query: 73  KIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKK 132
           K P  +F +    V+ V+K+IPRDPRFD LCGT+  K F   Y FI+ +RE +I  LKK+
Sbjct: 72  KKPVPRFRE----VVQVKKHIPRDPRFDGLCGTYDPKKFKRNYMFINKLRENDIEELKKE 127

Query: 133 LKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPLFRKKS 192
           L + + P++ +K+KYL+QR+ENQ+ E K+R+ K+Q++ EE     +A++ GEKP+F+KKS
Sbjct: 128 LAESREPQKIKKIKYLIQRLENQLHEEKRRNLKEQKDYEEKKEIAEAIRRGEKPVFKKKS 187

Query: 193 EKTMLNLVQKFETLKKTGKINKHIEK 218
           EK +L+LV ++E LK +GK+ KHIE+
Sbjct: 188 EKRILDLVFQYEELKNSGKLKKHIER 213

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201504|gb|EFN81267.1| UPF0399 protein C6orf153-like protein [Harpegnathos saltator]

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 150/212 (70%), Gaps = 11/212 (5%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D++ V IREEL  ++FE LQKLK+++GTK++ + +F  K       E   + FKRENKNR
Sbjct: 11  DKDHVQIREELSQMSFEDLQKLKDKLGTKIYKETLFGKK-------EVIKRQFKRENKNR 63

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE+S+KIP     +        +K + RDPRFDS+CGTF EKAF  +Y FI  +RE ++
Sbjct: 64  PREMSAKIPVSGLREVVKV----KKVVTRDPRFDSMCGTFNEKAFKRSYGFISKLRENDL 119

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
           S LKK+L +  +P   +K+KYL+QR+ENQ+RE K+  +K+ ++++E    ++++K GEKP
Sbjct: 120 STLKKELTQATDPRVIKKIKYLIQRVENQLREEKRLKKKEGKQQQEKKELMESIKRGEKP 179

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEK 218
           +F+KKSEK +L+L+ ++E LK+TGK+ KHI++
Sbjct: 180 VFKKKSEKKVLDLISQYEELKETGKLKKHIKR 211

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859881|ref|XP_003705420.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Megachile rotundata]

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 153/212 (72%), Gaps = 11/212 (5%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D+++  IR EL  ++FE LQKLK ++GTK++ + +F  +    K K+ E   +KRENKNR
Sbjct: 12  DKDQDQIRSELSQMSFEDLQKLKNKLGTKIYKEALFGPR----KVKKVE---YKRENKNR 64

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE+S+K P  +F +    V+  +K IPRDPRFDSLCG F +K F   Y F+ +I++ ++
Sbjct: 65  PREMSAKKPVSRFRE----VVQTKKFIPRDPRFDSLCGAFDQKVFKKTYGFLTEIKKNDL 120

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
           + LKK+LK+  +P+  +K+KYL+QR+ENQ+RE +++ ++++Q+ +E    ++A+K GEKP
Sbjct: 121 AALKKQLKETDDPKTTKKIKYLIQRLENQLREEQRKDQEEEQKGKEKKEIVEAIKRGEKP 180

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEK 218
            F+KKSEK +LNLV ++E LK +GK+ KHIE+
Sbjct: 181 AFKKKSEKKVLNLVSQYEELKNSGKLKKHIER 212

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795169|gb|EFZ17995.1| hypothetical protein SINV_06833 [Solenopsis invicta]

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/223 (46%), Positives = 158/223 (70%), Gaps = 7/223 (3%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D++R  IREELK ++F  LQKLKE++GTK++N+ +F  K         E  +FKR NKNR
Sbjct: 12  DKDREQIREELKHMSFADLQKLKEKLGTKVYNEAIFGKKIKKKI----EKIDFKRGNKNR 67

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE+SSK P          +  V+K + RDPRFDSLCGTF EKAF ++Y FI+ ++E ++
Sbjct: 68  PREMSSKKP---VPTSCVELTQVKKVVSRDPRFDSLCGTFNEKAFKNSYAFINKLKENDL 124

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
             L+K+LK+  + +  +K+KYL+QR+ENQ+RE K++ EK++++++E    + ++K GEKP
Sbjct: 125 QTLQKELKQTTDLKAIKKIKYLIQRLENQLREEKRKKEKEEKKQQEKKELLDSIKQGEKP 184

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERS 229
           +F+KKSEK +L+LV ++E LK TGK+ KHI++  K  K K+R+
Sbjct: 185 VFKKKSEKKVLDLVSQYEELKNTGKLKKHIQRLRKKNKHKDRT 227

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024950|ref|XP_003696249.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Apis florea]

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 150/212 (70%), Gaps = 11/212 (5%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D+++  IR EL  ++FE LQKLKE++G+K++ + +F  +            NFKRENKNR
Sbjct: 12  DKDQDQIRSELSQMSFEDLQKLKEKLGSKIYKETLFGPRKVKKI-------NFKRENKNR 64

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE S+K P  +F +    +I V+KNIPRDPRFDSLCGTF +K F  AY FI +++E ++
Sbjct: 65  PREESAKKPVSRFRE----IIHVKKNIPRDPRFDSLCGTFDQKRFKRAYGFITEMKENDL 120

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
             L+K+L   K+P++ +K+KYL+QR+ENQ+ E K++ E+++++ +E    I+ +K GEKP
Sbjct: 121 KELRKQLNDTKDPKKIKKIKYLIQRLENQLHEEKRKQEEEEKKYQEKKELIEIIKRGEKP 180

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEK 218
           +F+KKSEK  LNLV ++E LK  GK+ KHI++
Sbjct: 181 IFKKKSEKRFLNLVSQYEELKNRGKLKKHIQR 212

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025686|gb|EGI65845.1| UPF0399 protein C6orf153-like protein [Acromyrmex echinatior]

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 156/218 (71%), Gaps = 7/218 (3%)

Query: 13  IREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNRPREISS 72
           IREELK ++FE LQKLKE++GTK++N+ +F  K+        E   F+RENKNRPRE+S+
Sbjct: 3   IREELKHMSFENLQKLKEKLGTKVYNETLFGKKNKKKA----EKIKFRRENKNRPREMSA 58

Query: 73  KIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKK 132
           K P      +   +  V+K + RDPRFDSLCGTF EKAF ++Y FI+ +RE ++  L+K+
Sbjct: 59  KKP---IPIKYEEMTRVKKVVSRDPRFDSLCGTFNEKAFKNSYAFINKLRENDLKTLQKE 115

Query: 133 LKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPLFRKKS 192
           LK+  + +  +K+KYL+QR+ENQ+RE +++ EK++++  E    ++++K GEKP F+KKS
Sbjct: 116 LKETTDLKAIKKIKYLIQRLENQLREERKKKEKEEKKWLEKKELMESVKRGEKPAFKKKS 175

Query: 193 EKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQ 230
           EK +L+LV ++E LK TGK+ KHI++  K  K K+R++
Sbjct: 176 EKKVLDLVSQYEELKNTGKLKKHIQRLRKKNKHKDRTK 213

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110756615|ref|XP_001120288.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Apis mellifera]

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 151/212 (71%), Gaps = 11/212 (5%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
           D+++  IR EL  ++FE LQKLKE++G+K++ + +F  +         +  NFKRENKNR
Sbjct: 12  DKDQDQIRTELSQMSFEDLQKLKEKLGSKIYKETLFGPRKV-------KKINFKRENKNR 64

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE S+K P  +F +    +I V+KNIPRDPRFDSLCGTF +K F  AY FI +++E ++
Sbjct: 65  PREESAKKPVSRFKE----IIHVKKNIPRDPRFDSLCGTFDQKRFKKAYGFITEMKENDL 120

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
             L+K+L   K+P++ +K+KYL+QR+ENQ+ E K++ E+++++ +E    I+ ++ GEKP
Sbjct: 121 KELRKQLNDTKDPKKIKKIKYLIQRLENQLHEEKRKREEEEKKYQEKKELIEVMRRGEKP 180

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEK 218
           +F+KKSEK  LNLV ++E LK  GK+ KHI++
Sbjct: 181 VFKKKSEKRFLNLVSQYEELKNKGKLKKHIQR 212

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239493|ref|XP_975507.2| PREDICTED: similar to GA21095-PA [Tribolium castaneum] gi|270009556|gb|EFA06004.1| hypothetical protein TcasGA2_TC008830 [Tribolium castaneum]

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/226 (45%), Positives = 156/226 (69%), Gaps = 13/226 (5%)

Query: 7   DEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNR 66
            EER  I++ L  L+FE+LQK+KEE+G+KL+N+ +F +KS  SK        FKR NKNR
Sbjct: 16  SEEREKIKQRLSNLSFEELQKMKEEIGSKLYNETIFQTKSQPSK------TTFKRANKNR 69

Query: 67  PREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEI 126
           PRE+SSK P     +    VIPV+  + RDPRF+ +CGTF +K F   YKF++D+R++E 
Sbjct: 70  PREMSSKRP----VRLENNVIPVKHVLNRDPRFEPMCGTFDKKTFKKDYKFVNDLRKQEK 125

Query: 127 SILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKP 186
           + L K+LK+    E+K+K+K++++R+ENQ+RE +++   +Q+E++E +     LK GEK 
Sbjct: 126 TQLLKQLKE---TEDKKKIKFVIRRLENQIREEEKKERLEQEERKEKSEIKTKLKAGEKV 182

Query: 187 LFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQHN 232
            F+K+S K +  L+ KFE LKK+ K+ KH+EK++K + AKER + N
Sbjct: 183 HFKKRSVKRLEGLISKFEQLKKSNKLQKHLEKRSKKVSAKERKKLN 228

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
FB|FBgn0038235	244	CG8461 [Drosophila melanogaste	0.953	0.918	0.340	5.2e-26
ZFIN|ZDB-GENE-030131-9751	320	rrp36 "ribosomal RNA processin	0.876	0.643	0.313	2.3e-23
UNIPROTKB|A6QNR1	246	RRP36 "Ribosomal RNA processin	0.923	0.882	0.293	3.4e-22
UNIPROTKB|Q96EU6	259	RRP36 "Ribosomal RNA processin	0.897	0.814	0.301	3e-21
WB|WBGene00020705	457	T22H9.1 [Caenorhabditis elegan	0.965	0.496	0.262	6.5e-21
UNIPROTKB|A5GFR5	246	RRP36 "Novel protein similar t	0.910	0.869	0.283	2.7e-20
UNIPROTKB|Q58D25	550	KLHDC3 "Kelch domain-containin	0.846	0.361	0.299	1.1e-19
RGD|2321693	244	Rrp36 "ribosomal RNA processin	0.638	0.614	0.335	1.2e-17
MGI|MGI:2385053	244	Rrp36 "ribosomal RNA processin	0.906	0.872	0.270	2.5e-17
UNIPROTKB|E2RCI2	553	KLHDC3 "Uncharacterized protei	0.846	0.359	0.285	4.5e-17

FB|FBgn0038235 CG8461 [Drosophila melanogaster (taxid:7227)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 79/232 (34%), Positives = 116/232 (50%)

Query:     2 ESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXX 61
             E+SD +E + AIRE+LKG++FE++ KLKEE+G K++ + V  SKS               
Sbjct:    14 EASDDNETQNAIREDLKGMSFEEIMKLKEELGAKVYKEAVLGSKSSRPQKPKAKTDLKRL 73

Query:    62 XXXXXXXXISSKIPQKKFAQQSAPVIPVQKNIP-RDPRFDSLCGTFKEKAFHSAYKFIDD 120
                      + +  Q  F      V   +KN+  RDPRFD   GT+  + F   Y+F+  
Sbjct:    74 NKNRPREMTTRR--QVPFLGAEHRV-ERKKNVELRDPRFDEKSGTYSAETFKKNYQFVSQ 130

Query:   121 IRXXXXXXXXXXXXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQEKEEHTARIQAL 180
             IR                          +QR+ N+  E K+ H K +Q K+E +A IQ  
Sbjct:   131 IRAKEVGQLKKKLDEVEDEAEKHHIKDTMQRLINKNVEDKKWHTKQKQLKKERSA-IQK- 188

Query:   181 KH--GEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQ 230
             KH  G++P +  K E+    LV +FE LK TGK+NKH+EK+ K   AK+R +
Sbjct:   189 KHDLGQQPHYLTKKERRAKELVAQFEKLKNTGKLNKHMEKRRKKNAAKDRKR 240

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-030131-9751 rrp36 "ribosomal RNA processing 36 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 68/217 (31%), Positives = 110/217 (50%)

Query:    13 IREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXXXXXXXXXXISS 72
             I++EL  ++FE++  L+ ++GTK++NK  +                           ISS
Sbjct:   104 IKKELSTMSFEEIMALQNKVGTKVYNKIAYGDTKQKKKNEPMKRLNKHRPQE-----ISS 158

Query:    73 KIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRXXXXXXXXXX 132
             K  +  F ++   V+PV+K I RDPRFD L G +K + F+  YKFI +I+          
Sbjct:   159 K-QRVPFLRK---VVPVKKMISRDPRFDDLSGEYKPEIFNQTYKFIKNIQEKEAQEVRKQ 214

Query:   133 XXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALK-HGEKPLFRKK 191
                            L++RM+NQ R A+QR E++++++ E   + + L   G KP + KK
Sbjct:   215 LKKTKSKAKQEELKALLRRMDNQQR-ARQRQEQEREKELEFKRKQRELVGQGHKPFYLKK 273

Query:   192 SEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
             S+K  L L +K+  LKK+GK+   + KK K    K+R
Sbjct:   274 SDKKKLELAEKYSELKKSGKLENFLSKKRKRNATKDR 310

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

UNIPROTKB|A6QNR1 RRP36 "Ribosomal RNA processing protein 36 homolog" [Bos taurus (taxid:9913)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 68/232 (29%), Positives = 111/232 (47%)

Query:     2 ESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXX 61
             E+ D  E+  ++R +   ++FE+L +L+ ++GTK + K++    S               
Sbjct:    17 EAQDGGEDDGSLRNDTSHMSFEELLELQSQVGTKAY-KQLVTGSSTKKQSSRPPVQKGCV 75

Query:    62 XXXXXXXXISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDI 121
                     +S+K+ +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F+DDI
Sbjct:    76 ADKHRPLEMSAKV-RVPFLRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLDDI 131

Query:   122 RXXXXXXXXXXXXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQE-----KEEHTAR 176
             R                        +L+QRME Q  E  Q+  K QQE     K+E  A+
Sbjct:   132 RAREKELVKKQLKKHRSGEEHEKLQHLLQRMEQQ--EMAQKERKRQQELRLALKQERRAQ 189

Query:   177 IQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
              Q    G +P F KKSE+  L L +KF+ LK++ K+   + +K +    K+R
Sbjct:   190 AQ---QGHRPYFLKKSEQRQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDR 238

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISS

GO:0006364 "rRNA processing" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

UNIPROTKB|Q96EU6 RRP36 "Ribosomal RNA processing protein 36 homolog" [Homo sapiens (taxid:9606)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 69/229 (30%), Positives = 108/229 (47%)

Query:     8 EERVAIREELKG---LTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXXXXX 64
             E     R+ L+G   ++FE+L +L+ ++GTK + K++    SP                 
Sbjct:    33 EPAAVARDLLRGTSNMSFEELLELQSQVGTKTY-KQLVAGNSPKKQASRPPIQNACVADK 91

Query:    65 XXXXXISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRXX 124
                  +S+KI +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F++DIR  
Sbjct:    92 HRPLEMSAKI-RVPFLRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLNDIRAK 147

Query:   125 XXXXXXXXXXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQE-----KEEHTARIQA 179
                                    L+QRME Q  E  Q+  K QQE     K+E  A+ Q 
Sbjct:   148 EKELVKKQLKKHLSGEEHEKLQQLLQRMEQQ--EMAQQERKQQQELHLALKQERRAQAQ- 204

Query:   180 LKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
                G +P F KKSE+  L L +KF+ LK++ K+   + +K +    K+R
Sbjct:   205 --QGHRPYFLKKSEQRQLALAEKFKELKRSKKLENFLSRKRRRNAGKDR 251

GO:0005730 "nucleolus" evidence=IDA

GO:0006364 "rRNA processing" evidence=IDA

GO:0042274 "ribosomal small subunit biogenesis" evidence=IDA

WB|WBGene00020705 T22H9.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 251 (93.4 bits), Expect = 6.5e-21, P = 6.5e-21
 Identities = 61/232 (26%), Positives = 105/232 (45%)

Query:     2 ESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXX 61
             E  D ++ER+  REE+  +   +++++KE++G KLFNK  F +                 
Sbjct:   214 EEEDDEDERLKFREEISKMPLGKVKEMKEKLGIKLFNKTYFGTSEADKKRADEKKKAAEK 273

Query:    62 XXXXXXX--XISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFID 119
                       +SSK P   F          +K    DPRFD+  G FKE  F + Y+F+D
Sbjct:   274 ADKGQHRPREMSSKRPVSAFRNIYGGHEQEKKKKKWDPRFDARAGDFKEVCFENNYQFLD 333

Query:   120 DIRXXXXXXXXXXXXXXXXXXXXXXXXYL---VQRMENQMREAKQRHEKDQQEKEEHTAR 176
             +IR                         L   + +ME + +   ++    +  KE H   
Sbjct:   334 EIRTGEMQDLRNEYNTARAEGDEKKAERLKNTLHKMETREKTRAEKRRHAETRKELHDDN 393

Query:   177 IQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
             I+ +  GE P+FR K++   ++  +K+E LKK  K++K++++K K   AK++
Sbjct:   394 IERMLRGEAPIFRTKAQVRRIDAEKKYEELKKDNKLDKYLQRKAKKESAKQK 445

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

UNIPROTKB|A5GFR5 RRP36 "Novel protein similar to vertebrate chromosome 6 open reading frame 153 (C6orf153)" [Sus scrofa (taxid:9823)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 65/229 (28%), Positives = 107/229 (46%)

Query:     5 DIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXXXXX 64
             D +E+   +R     ++FE+L +L+ ++GTK + K++    S                  
Sbjct:    20 DGEEDGGGLRNGTSDMSFEELLELQSQVGTKTY-KQLVTGNSTKKQSSRPPVQKACVADK 78

Query:    65 XXXXXISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRXX 124
                  +S+K+ +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F++DIR  
Sbjct:    79 HRPLEMSAKV-RVPFLRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLNDIRAR 134

Query:   125 XXXXXXXXXXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQE-----KEEHTARIQA 179
                                    L+QRME Q  +  Q+  K QQE     K+E  A+ Q 
Sbjct:   135 EKELVKKQLKKRRSGEEHEKLQQLLQRMEQQ--DMAQQERKRQQELRLALKQERRAQAQ- 191

Query:   180 LKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
                G +P F KKSE+  L L +KF+ LK++ K+   + +K +    K+R
Sbjct:   192 --QGHRPYFLKKSEQRQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDR 238

GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|Q58D25 KLHDC3 "Kelch domain-containing protein 3" [Bos taurus (taxid:9913)]

 Score = 242 (90.2 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 64/214 (29%), Positives = 102/214 (47%)

Query:    20 LTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXXXXXXXXXXISSKIPQKKF 79
             ++FE+L +L+ ++GTK + K++    S                       +S+K+ +  F
Sbjct:   339 MSFEELLELQSQVGTKAY-KQLVTGSSTKKQSSRPPVQKGCVADKHRPLEMSAKV-RVPF 396

Query:    80 AQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRXXXXXXXXXXXXXXXXX 139
              +Q   V+P+ K + RDPRFD L G +  + F   Y+F+DDIR                 
Sbjct:   397 LRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLDDIRAREKELVKKQLKKHRSG 453

Query:   140 XXXXXXXYLVQRMENQMREAKQRHEKDQQE-----KEEHTARIQALKHGEKPLFRKKSEK 194
                    +L+QRME Q  E  Q+  K QQE     K+E  A+ Q    G +P F KKSE+
Sbjct:   454 EEHEKLQHLLQRMEQQ--EMAQKERKRQQELRLALKQERRAQAQ---QGHRPYFLKKSEQ 508

Query:   195 TMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
               L L +KF+ LK++ K+   + +K +    K+R
Sbjct:   509 RQLVLAEKFKELKRSKKLESFLSRKRRRNAGKDR 542

GO:0005737 "cytoplasm" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

RGD|2321693 Rrp36 "ribosomal RNA processing 36 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 55/164 (33%), Positives = 81/164 (49%)

Query:    70 ISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRXXXXXXX 129
             +S+K+P   F +Q   V+P+ K + RDPRFD L G +  + F   Y+F++DIR       
Sbjct:    82 MSAKVPVP-FLRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLNDIRAKEKQLV 137

Query:   130 XXXXXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQE-----KEEHTARIQALKHGE 184
                               L+QRME Q  E  Q+  K QQE     K+E  A  Q    G 
Sbjct:   138 KRQLKKHRSGEKHEKLQQLLQRMEQQ--EMAQQERKQQQELRLALKQERRALAQ---QGH 192

Query:   185 KPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
             +P F KKSE+  L L +KF+ LK++ K+   + +K +    K+R
Sbjct:   193 RPYFLKKSEQRQLALAEKFKDLKRSKKLESFLSRKRRRNAGKDR 236

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006364 "rRNA processing" evidence=IEA;ISO

GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA;ISO

MGI|MGI:2385053 Rrp36 "ribosomal RNA processing 36 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 63/233 (27%), Positives = 107/233 (45%)

Query:     1 MESSDIDEERVAIREELKGLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXX 60
             ME  ++  +R  ++ +   ++FE+L +L+ +   K   + V    + +S           
Sbjct:    19 MEGGEVTGDR--LKADTPDVSFEELLRLQGQGRPKAHKQLV----AGNSTRTRSPQQPVC 72

Query:    61 XXXXXXXXXISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDD 120
                      +S+K+ +  F +Q   V+P+ K + RDPRFD L G +  + F   Y+F++D
Sbjct:    73 VADKHRPLEMSAKV-RVPFLRQ---VVPISKKVARDPRFDDLSGDYNPEVFDKTYQFLND 128

Query:   121 IRXXXXXXXXXXXXXXXXXXXXXXXXYLVQRMENQMREAKQRHEKDQQE-----KEEHTA 175
             IR                         L+QRME Q  E  Q+  K QQE     K+E  A
Sbjct:   129 IRAKEKQLVKKQLKRHRSGEERDKLQQLLQRMEQQ--EMAQQERKQQQELRLALKQERRA 186

Query:   176 RIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
             + Q    G +P F KKSE+  L L +KF+ L+++ K+   + +K +    K+R
Sbjct:   187 QAQ---QGHRPYFLKKSEQRQLALAEKFKELRRSKKLESFLSRKRRRNAGKDR 236

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0006364 "rRNA processing" evidence=ISO

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO

UNIPROTKB|E2RCI2 KLHDC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 218 (81.8 bits), Expect = 4.5e-17, P = 4.5e-17
 Identities = 62/217 (28%), Positives = 101/217 (46%)

Query:    20 LTFEQLQKLKEEMGTKLFNKKVFNSKSPSSXXXXXXXXXXXXXXXXXXXXISSKIPQKKF 79
             ++FE+L +L+ ++GTK + K++    S                       +S+K+ +  F
Sbjct:   339 MSFEELLELQSQVGTKTY-KRLVAGNSSKKEGSRPRVQNACVADKHRPLEMSAKV-RVPF 396

Query:    80 AQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIRXXXXXXXXXXXXXXXXX 139
              +Q   V+P+ K + RDPRFD L G +  + F   Y+F++DIR                 
Sbjct:   397 LRQ---VVPISKKVARDPRFDDLSGEYNPEVFDKTYEFLNDIRAKEKENVELVKKQLKKH 453

Query:   140 XXXXXXX---YLVQRMENQMREAKQRHEKDQQE-----KEEHTARIQALKHGEKPLFRKK 191
                        L+QRME Q  E  Q+  + QQE     K+E  AR Q    G +P F KK
Sbjct:   454 HSGQEHEKLQQLLQRMEQQ--EMAQQERRRQQELRLALKQEQRARAQ---QGHRPYFLKK 508

Query:   192 SEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
             SE+  L L +KF+ LK++ ++   + +K +    K+R
Sbjct:   509 SEQRQLVLAEKFKELKRSKRLESFLSRKRRRNAGKDR 545

GO:0005737 "cytoplasm" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6QNR1	RRP36_BOVIN	No assigned EC number	0.3577	0.9234	0.8821	yes	N/A
Q96EU6	RRP36_HUMAN	No assigned EC number	0.3711	0.8978	0.8146	yes	N/A
Q3UFY0	RRP36_MOUSE	No assigned EC number	0.3261	0.9063	0.8729	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	235
pfam06102	168	pfam06102, DUF947, Domain of unknown function (DUF	2e-22

>gnl|CDD|218899 pfam06102, DUF947, Domain of unknown function (DUF947)

 Score = 89.3 bits (222), Expect = 2e-22
 Identities = 68/169 (40%), Positives = 101/169 (59%), Gaps = 2/169 (1%)

Query: 60  KRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPRFDSLCGTFKEKAFHSAYKFID 119
           KR++K+ P E+SSK P  +        +  +K   RDPRFDSL G      F   YKF+D
Sbjct: 1   KRKSKHAPMELSSKKPVSRKRDI--IEVEKKKPKVRDPRFDSLSGKLNLDKFRKNYKFLD 58

Query: 120 DIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQA 179
           D REKEI  L+K LKK K+ EEKE++K  +Q M+++++  K +  + +  KE      + 
Sbjct: 59  DYREKEIEELEKALKKTKDSEEKEELKRTLQSMKSRLKTLKNKDREREILKEHKKQEKEL 118

Query: 180 LKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKER 228
           +K G+KP + KKSE   L L +KF+ LKK+ +++K +EKK K    KE+
Sbjct: 119 IKEGKKPYYLKKSEIKKLVLKKKFDELKKSKQLDKALEKKRKKNAGKEK 167

Family of eukaryotic proteins with unknown function. Length = 168

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
PF06102	168	DUF947: Domain of unknown function (DUF947); Inter	100.0
KOG3190|consensus	256		100.0

>PF06102 DUF947: Domain of unknown function (DUF947); InterPro: IPR009292 This is a family of eukaryotic proteins with unknown function

Probab=100.00  E-value=2.9e-56  Score=377.11  Aligned_cols=166  Identities=51%  Similarity=0.778  Sum_probs=163.3

Q ss_pred             ccccCCCCccccCCCCccccccCCCCcccC--CCCCCCCCCccccCCCcchhhhhhhcCCchHHHHHHHHHHHHHHhhcC
Q psy14443         60 KRENKNRPREISSKIPQKKFAQQSAPVIPV--QKNIPRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEK  137 (235)
Q Consensus        60 kR~nK~aP~E~SSKk~V~r~R~~~~~v~~~--~k~~~RDPRFd~~~G~~~~~~f~k~Y~FL~e~r~~E~~~Lk~~lkk~k  137 (235)
                      ||.|||||+||||++|||++|    +||++  +++.+||||||++||+||.++|+++|+||+|||..|+.+|+++|++++
T Consensus         1 KR~~K~aP~E~SSKk~v~r~r----~v~~~~~~k~~~rDPRFd~~~G~~~~~~f~k~Y~FL~d~r~~E~~~Lk~~lk~~k   76 (168)
T PF06102_consen    1 KRSNKNAPREMSSKKPVSRFR----QVVQVEKKKKKRRDPRFDSLSGEFNEDLFRKNYGFLDDYREKEIKELKKQLKKTK   76 (168)
T ss_pred             CCCCCCCCccccCCCCCCCcc----cccCccccCCCCCCCCcCccccccCHHHHHHhhhhHHHHHHHHHHHHHHHHHHcC
Confidence            589999999999999999999    99988  889999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14443        138 NPEEKEKVKYLVQRMENQMREAKQRHEKDQQEKEEHTARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIE  217 (235)
Q Consensus       138 ~~~~~e~lk~~l~r~~~q~~~~~~~~~~~e~~~e~kk~e~e~vk~GKkPfflKkse~Kk~~l~~kf~~Lk~~Gkl~K~le  217 (235)
                      |+++++.|+.+|++|++++.+.+.++.+++++.+|+++|+++|.+|++|||||+||+++++|.++|++|+++|+|++||+
T Consensus        77 ~~~~~e~lk~~L~~~~~q~~~~~~~~~~~e~~~~~kk~E~e~v~~GKkP~flKkse~Kk~~l~~kf~~lk~~~kl~K~le  156 (168)
T PF06102_consen   77 DPEEREELKRELQRMESQLKARKRKDREREVKKEHKKEEREKVKQGKKPFFLKKSEKKKLELKEKFKELKKSGKLDKYLE  156 (168)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhhhhc
Q psy14443        218 KKTKALKAKERS  229 (235)
Q Consensus       218 kkRKK~~~Ke~k  229 (235)
                      ++|||+++||++
T Consensus       157 kkrKK~~~Ke~k  168 (168)
T PF06102_consen  157 KKRKKNASKERK  168 (168)
T ss_pred             HHHhhhcccccC
Confidence            999999999986

>KOG3190|consensus

Probab=100.00  E-value=4.2e-52  Score=363.53  Aligned_cols=201  Identities=35%  Similarity=0.567  Sum_probs=174.4

Q ss_pred             CCCHHHHHHHHHHhChhhhhhhhccCCCCCCccccccchhhccccCCCCccccCCCCccccccCCCCcccCCCCCCCCCC
Q psy14443         19 GLTFEQLQKLKEEMGTKLFNKKVFNSKSPSSKFKEHENKNFKRENKNRPREISSKIPQKKFAQQSAPVIPVQKNIPRDPR   98 (235)
Q Consensus        19 ~~sF~~L~k~q~~~g~k~~~e~~~~~~~~~~~~k~~~~~~~kR~nK~aP~E~SSKk~V~r~R~~~~~v~~~~k~~~RDPR   98 (235)
                      +++|+++.+||..+|+++|-....+......       ...+-.+||||+|||||+||||||    +||+++++..||||
T Consensus        48 ~~~~ee~~klqs~~~~kty~~~~~~~~~~~q-------~k~k~k~KHrP~E~SSKkpVsr~R----~Vv~~~kk~~rDPR  116 (256)
T KOG3190|consen   48 GKVFEEKEKLQSKLGNKTYFGTSEQDKKRGQ-------AKKKAKGKHRPREMSSKKPVSRFR----NVVGGPKKKKRDPR  116 (256)
T ss_pred             cccHHHHHHHHHhhcccccccccccccchhh-------cccccccccCchhhhccCCchHHh----hccCCccccccCcc
Confidence            6779999999999999998876654322211       123348999999999999999999    99999999999999


Q ss_pred             ccccCCCcchhhhhhhcCCchHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Q psy14443         99 FDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRMENQMREAKQRHE----KDQQEKEEHT  174 (235)
Q Consensus        99 Fd~~~G~~~~~~f~k~Y~FL~e~r~~E~~~Lk~~lkk~k~~~~~e~lk~~l~r~~~q~~~~~~~~~----~~e~~~e~kk  174 (235)
                      ||+++|.||+++|++||.|||+||..|| +|++.|..++.++++.++.+   .|..++.+.+.+..    ..++..+++.
T Consensus       117 FD~lsG~l~~~~~~knYqFLde~R~~E~-eLkk~l~~~k~~~~~~q~~r---q~~~~~~s~ker~~~ekr~~~~~~elk~  192 (256)
T KOG3190|consen  117 FDALSGDLDEECFRKNYQFLDEIRVKEI-ELKKELNKAKAEEKIDQLER---QMTQHLMSTKERTQAEKRHAETRKELKD  192 (256)
T ss_pred             hhhccCccCHHHHHhhhhhHhhhhhhHH-HHHHHHHhhhchHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            9999999999999999999999999999 89999999998887776655   44444444433333    4589999999


Q ss_pred             HHHHHHHcCCCCcccchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhhhccCCCC
Q psy14443        175 ARIQALKHGEKPLFRKKSEKTMLNLVQKFETLKKTGKINKHIEKKTKALKAKERSQHNYF  234 (235)
Q Consensus       175 ~e~e~vk~GKkPfflKkse~Kk~~l~~kf~~Lk~~Gkl~K~lekkRKK~~~Ke~k~l~~~  234 (235)
                      .+++++++|++|||||+|+++++++.++|++|+.+++|++||+|+|||+|+||+++|||.
T Consensus       193 ~e~e~~k~G~~Py~LKKsE~Rkl~~~~Ky~~lK~skkLdkylerKRkk~a~Ke~k~~P~~  252 (256)
T KOG3190|consen  193 DERERAKEGKRPYFLKKSEQRKLDQEEKYKELKKSKKLDKYLERKRKKRAGKEKKHLPFE  252 (256)
T ss_pred             HHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhcCccc
Confidence            999999999999999999999999999999999999999999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	235
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 4e-05
 Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 13/101 (12%)

Query: 94  PRDPRFDSLCGTFKEKAFHSAYKFIDDIREKEISILKKKLKKEKNPEEKEKVKYLVQRME 153
                   L  T   K      KF++++       L   +K E+         Y+ QR  
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-- 116

Query: 154 NQMREAKQRHEKDQQEKEEHTARIQ-ALK----------HG 183
           +++    Q   K    + +   +++ AL            G
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00