Psyllid ID: psy14832


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210---
MSMMAGRRNPIRRDSIKHQNFSSGNFEQSKTKGTKPTPAKETLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWLV
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHEEEEEccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHccEEEcccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccc
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccEccccccHHHHHHHHHHHHHHHHHHHHHHHcc
msmmagrrnpirrdsikhqnfssgnfeqsktkgtkptpaketLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIigdvlpypksyfsqsshFLNQYFVKlgwgwtlictipfVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYgrcteprfsrrskcleagarwsgfdisghSFLLIYSVLIMIEEakpiqgwlv
msmmagrrnpirrdsikhqnfssgnfeqsktkgtkptpaketlvdELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGArwsgfdisgHSFLLIYSVLIMIEEAKPIQGWLV
MSMMAGRRNPIRRDSIKHQNFSSGNFEQSKTKGTKPTPAKETLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWLV
*****************************************TLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGW**
******************************************LVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRF*****CLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWLV
*********PIRRDSIKHQNFSSG**************AKETLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWLV
***************************************KETLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWLV
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSMMAGRRNPIRRDSIKHQNFSSGNFEQSKTKGTKPTPAKETLVDELIRVVLGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGWLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query213 2.2.26 [Sep-21-2011]
Q9VRJ2 423 FIT family protein CG1067 yes N/A 0.976 0.491 0.438 2e-53
Q52KL1252 Fat storage-inducing tran yes N/A 0.615 0.519 0.410 2e-22
Q6AX73260 Fat storage-inducing tran N/A N/A 0.619 0.507 0.421 6e-22
A0JP80260 Fat storage-inducing tran yes N/A 0.643 0.526 0.393 3e-21
Q5CZ37283 FIT family protein ZK265. yes N/A 0.868 0.653 0.303 2e-20
P59266262 Fat storage-inducing tran yes N/A 0.624 0.507 0.380 7e-19
Q8N6M3262 Fat storage-inducing tran yes N/A 0.610 0.496 0.352 6e-18
A4IFN5262 Fat storage-inducing tran yes N/A 0.610 0.496 0.352 3e-17
B2LYG4262 Fat storage-inducing tran yes N/A 0.600 0.488 0.354 1e-16
A7YWN2292 Fat storage-inducing tran no N/A 0.633 0.462 0.348 1e-13
>sp|Q9VRJ2|FITM_DROME FIT family protein CG10671 OS=Drosophila melanogaster GN=CG10671 PE=1 SV=1 Back     alignment and function desciption
 Score =  209 bits (531), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 146/221 (66%), Gaps = 13/221 (5%)

Query: 4   MAGRRNPIRRD----------SIKHQNFSSG--NFEQSKTKGTKPTPAKETLVDELIRVV 51
           MA +R P+R +          S  + NF  G  +  +S+ +GT+PT A  ++ + L+  V
Sbjct: 1   MATKRRPLRPNLGGTAGSPSSSGSNMNFRPGGPDITRSEARGTRPTAAPTSIREILVMGV 60

Query: 52  LGLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTL 111
           + L  K +      ++A YLG LF +S+IGD +P+PK+YF++S +  NQYFVK+GWGWTL
Sbjct: 61  IHLCKKTIFFNTDLKVALYLGSLFVISVIGDFVPFPKTYFARSDNLFNQYFVKIGWGWTL 120

Query: 112 ICTIPFVVMTSYTYCCSDRKQ-VAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFS 170
           +  +PF+V+++YT  C D K+ +  H  R+ +ATFFW FWT +F  +E+ YGRCT   ++
Sbjct: 121 LFVVPFLVLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKLFNVVENSYGRCTTKGYA 180

Query: 171 RRSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGW 211
            +S CL+AG  W GFDISGH+F+LI+S L++IEEA+PI  W
Sbjct: 181 TKSSCLKAGHLWKGFDISGHAFILIHSSLVLIEEARPIIRW 221





Drosophila melanogaster (taxid: 7227)
>sp|Q52KL1|FITM2_DANRE Fat storage-inducing transmembrane protein 2 OS=Danio rerio GN=fitm2 PE=2 SV=1 Back     alignment and function description
>sp|Q6AX73|FITM2_XENLA Fat storage-inducing transmembrane protein 2 OS=Xenopus laevis GN=fitm2 PE=2 SV=1 Back     alignment and function description
>sp|A0JP80|FITM2_XENTR Fat storage-inducing transmembrane protein 2 OS=Xenopus tropicalis GN=fitm2 PE=2 SV=1 Back     alignment and function description
>sp|Q5CZ37|FITM_CAEEL FIT family protein ZK265.9 OS=Caenorhabditis elegans GN=ZK265.9 PE=3 SV=1 Back     alignment and function description
>sp|P59266|FITM2_MOUSE Fat storage-inducing transmembrane protein 2 OS=Mus musculus GN=Fitm2 PE=1 SV=1 Back     alignment and function description
>sp|Q8N6M3|FITM2_HUMAN Fat storage-inducing transmembrane protein 2 OS=Homo sapiens GN=FITM2 PE=2 SV=1 Back     alignment and function description
>sp|A4IFN5|FITM2_BOVIN Fat storage-inducing transmembrane protein 2 OS=Bos taurus GN=FITM2 PE=2 SV=1 Back     alignment and function description
>sp|B2LYG4|FITM2_PIG Fat storage-inducing transmembrane protein 2 OS=Sus scrofa GN=FITM2 PE=2 SV=1 Back     alignment and function description
>sp|A7YWN2|FITM1_BOVIN Fat storage-inducing transmembrane protein 1 OS=Bos taurus GN=FITM1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query213
195491930 422 GE20570 [Drosophila yakuba] gi|194179877 0.976 0.492 0.445 3e-52
194866935 422 GG14142 [Drosophila erecta] gi|190653755 0.976 0.492 0.445 5e-52
24658203 423 CG10671, isoform A [Drosophila melanogas 0.976 0.491 0.438 9e-52
45551515 480 CG10671, isoform B [Drosophila melanogas 0.976 0.433 0.438 1e-51
198467157 417 GA24379 [Drosophila pseudoobscura pseudo 0.976 0.498 0.451 1e-51
195167793 399 GL22469 [Drosophila persimilis] gi|19410 0.976 0.521 0.451 1e-51
195376311 424 GJ12208 [Drosophila virilis] gi|19415409 0.976 0.490 0.451 2e-51
357628552 362 hypothetical protein KGM_02741 [Danaus p 0.924 0.544 0.492 3e-51
16198091 423 LD30661p [Drosophila melanogaster] 0.976 0.491 0.434 8e-51
195441679 421 GK20582 [Drosophila willistoni] gi|19416 0.976 0.494 0.440 1e-50
>gi|195491930|ref|XP_002093776.1| GE20570 [Drosophila yakuba] gi|194179877|gb|EDW93488.1| GE20570 [Drosophila yakuba] Back     alignment and taxonomy information
 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 146/220 (66%), Gaps = 12/220 (5%)

Query: 4   MAGRRNPIRRD---------SIKHQNFSSG--NFEQSKTKGTKPTPAKETLVDELIRVVL 52
           MA +R P+R +         S  + NF  G  +  +S+ +GT+PT A  ++ + L+  V+
Sbjct: 1   MATKRRPLRPNLGGTAGSPSSGSNMNFRPGGPDITRSEARGTRPTAAPTSIREILVMGVI 60

Query: 53  GLGNKYLMLEIKYRIATYLGILFAVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLI 112
            L  K +      ++A YLG LF +S+IGD +P+PK+YF++S +  NQYFVK+GWGWTL+
Sbjct: 61  HLCKKTIFFNTDLKVALYLGSLFVISVIGDFVPFPKTYFARSDNLFNQYFVKVGWGWTLL 120

Query: 113 CTIPFVVMTSYTYCCSDRKQ-VAFHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSR 171
             +PF+V+++YT  C D K+ +  H  R+ +ATFFW FWT MF  +E+ YGRCT   ++ 
Sbjct: 121 FVVPFLVLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKMFNVVENSYGRCTTKGYAS 180

Query: 172 RSKCLEAGARWSGFDISGHSFLLIYSVLIMIEEAKPIQGW 211
           +S CL+AG  W GFDISGH+F+LI+S L++IEEA+PI  W
Sbjct: 181 KSSCLKAGHLWKGFDISGHAFILIHSSLVLIEEARPIIRW 220




Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194866935|ref|XP_001971972.1| GG14142 [Drosophila erecta] gi|190653755|gb|EDV50998.1| GG14142 [Drosophila erecta] Back     alignment and taxonomy information
>gi|24658203|ref|NP_647944.2| CG10671, isoform A [Drosophila melanogaster] gi|74870585|sp|Q9VRJ2.1|FITM_DROME RecName: Full=FIT family protein CG10671 gi|7295489|gb|AAF50803.1| CG10671, isoform A [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|45551515|ref|NP_729053.2| CG10671, isoform B [Drosophila melanogaster] gi|45446043|gb|AAN12239.2| CG10671, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|198467157|ref|XP_002134686.1| GA24379 [Drosophila pseudoobscura pseudoobscura] gi|198149530|gb|EDY73313.1| GA24379 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195167793|ref|XP_002024717.1| GL22469 [Drosophila persimilis] gi|194108122|gb|EDW30165.1| GL22469 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|195376311|ref|XP_002046940.1| GJ12208 [Drosophila virilis] gi|194154098|gb|EDW69282.1| GJ12208 [Drosophila virilis] Back     alignment and taxonomy information
>gi|357628552|gb|EHJ77847.1| hypothetical protein KGM_02741 [Danaus plexippus] Back     alignment and taxonomy information
>gi|16198091|gb|AAL13842.1| LD30661p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|195441679|ref|XP_002068630.1| GK20582 [Drosophila willistoni] gi|194164715|gb|EDW79616.1| GK20582 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query213
FB|FBgn0035586 423 CG10671 [Drosophila melanogast 0.910 0.458 0.461 5.1e-51
ZFIN|ZDB-GENE-050508-5252 fitm2 "fat storage-inducing tr 0.629 0.531 0.412 2e-24
UNIPROTKB|Q6AX73260 fitm2 "Fat storage-inducing tr 0.615 0.503 0.424 2.9e-23
UNIPROTKB|A0JP80260 fitm2 "Fat storage-inducing tr 0.633 0.519 0.405 4.8e-23
WB|WBGene00044094283 ZK265.9 [Caenorhabditis elegan 0.807 0.607 0.321 4.3e-22
MGI|MGI:2444508262 Fitm2 "fat storage-inducing tr 0.610 0.496 0.395 8e-21
RGD|1307696262 Fitm2 "fat storage-inducing tr 0.615 0.5 0.388 4.4e-20
UNIPROTKB|Q8N6M3262 FITM2 "Fat storage-inducing tr 0.610 0.496 0.381 5.7e-20
UNIPROTKB|D2H6K9262 FITM2 "Uncharacterized protein 0.610 0.496 0.388 1.5e-19
UNIPROTKB|E2RAV7388 FITM2 "Uncharacterized protein 0.610 0.335 0.388 3.2e-19
FB|FBgn0035586 CG10671 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 91/197 (46%), Positives = 137/197 (69%)

Query:    18 HQNFSSG--NFEQSKTKGTKPTPAKETLVDELIRVVLGLGNKYLMLEIKYRIATYLGILF 75
             + NF  G  +  +S+ +GT+PT A  ++ + L+  V+ L  K +      ++A YLG LF
Sbjct:    25 NMNFRPGGPDITRSEARGTRPTAAPTSIREILVMGVIHLCKKTIFFNTDLKVALYLGSLF 84

Query:    76 AVSIIGDVLPYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQVA- 134
              +S+IGD +P+PK+YF++S +  NQYFVK+GWGWTL+  +PF+V+++YT  C D K++  
Sbjct:    85 VISVIGDFVPFPKTYFARSDNLFNQYFVKIGWGWTLLFVVPFLVLSAYTITCGDHKRMLR 144

Query:   135 FHLLRLGVATFFWMFWTNMFQYIESIYGRCTEPRFSRRSKCLEAGARWSGFDISGHSFLL 194
              H  R+ +ATFFW FWT +F  +E+ YGRCT   ++ +S CL+AG  W GFDISGH+F+L
Sbjct:   145 HHFPRIVIATFFWFFWTKLFNVVENSYGRCTTKGYATKSSCLKAGHLWKGFDISGHAFIL 204

Query:   195 IYSVLIMIEEAKPIQGW 211
             I+S L++IEEA+PI  W
Sbjct:   205 IHSSLVLIEEARPIIRW 221




GO:0003674 "molecular_function" evidence=ND
GO:0019915 "lipid storage" evidence=ISS
GO:0005789 "endoplasmic reticulum membrane" evidence=ISS
ZFIN|ZDB-GENE-050508-5 fitm2 "fat storage-inducing transmembrane protein 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q6AX73 fitm2 "Fat storage-inducing transmembrane protein 2" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|A0JP80 fitm2 "Fat storage-inducing transmembrane protein 2" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
WB|WBGene00044094 ZK265.9 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:2444508 Fitm2 "fat storage-inducing transmembrane protein 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307696 Fitm2 "fat storage-inducing transmembrane protein 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N6M3 FITM2 "Fat storage-inducing transmembrane protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D2H6K9 FITM2 "Uncharacterized protein" [Ailuropoda melanoleuca (taxid:9646)] Back     alignment and assigned GO terms
UNIPROTKB|E2RAV7 FITM2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5CZ37FITM_CAEELNo assigned EC number0.30390.86850.6537yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query213
pfam10261223 pfam10261, Scs3p, Inositol phospholipid synthesis 3e-34
>gnl|CDD|220660 pfam10261, Scs3p, Inositol phospholipid synthesis and fat-storage-inducing TM Back     alignment and domain information
 Score =  121 bits (305), Expect = 3e-34
 Identities = 52/146 (35%), Positives = 71/146 (48%), Gaps = 18/146 (12%)

Query: 85  PYPKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDR--KQVAFHLLRLGV 142
           P P SYF+   + LNQYFVK GW WT +    F+++ S +   S+R   ++  HL R  V
Sbjct: 1   PRPYSYFANKDNVLNQYFVKRGWFWTTLFYGLFLLLYSASLTRSNRFSLRIIQHLSRYVV 60

Query: 143 ATFFWMFWTNMFQ------YIESIYG-RCTEPRFS--------RRSKCLEAGARW-SGFD 186
           AT +W  +T  F        I  + G  C+E  F           + C  AG  W  GFD
Sbjct: 61  ATLWWYLFTQWFFGPPIFDRIFVLTGGSCSESLFDTAGPKELISSAACRRAGGLWIGGFD 120

Query: 187 ISGHSFLLIYSVLIMIEEAKPIQGWL 212
           ISGH FLL+ S L++ EE   +    
Sbjct: 121 ISGHVFLLVLSSLLLWEELGQVARVF 146


This is a family of transmembrane proteins which are variously annotated as possibly being inositol phospholipid synthesis protein and fat-storage-inducing. The members are conserved from yeasts to humans and are localised to the endoplasmic reticulum where they are involved in triglyceride lipid droplet formation. Length = 223

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 213
PF10261238 Scs3p: Inositol phospholipid synthesis and fat-sto 100.0
KOG3750|consensus270 100.0
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation Back     alignment and domain information
Probab=100.00  E-value=3.6e-42  Score=300.34  Aligned_cols=121  Identities=45%  Similarity=0.821  Sum_probs=105.0

Q ss_pred             CCcccccCCChhhHHhhhhhhHHHHHHHHHhhheeeeeeecCchhh--HHHHHHHHHHHHHHHHHHhhhh------hHHh
Q psy14832         87 PKSYFSQSSHFLNQYFVKLGWGWTLICTIPFVVMTSYTYCCSDRKQ--VAFHLLRLGVATFFWMFWTNMF------QYIE  158 (213)
Q Consensus        87 p~~Yfa~k~N~lN~~FVK~gW~WTtl~~~~f~~l~~~~~~~~~~~~--~~r~l~Ry~v~T~~W~~~Tq~F------~~Id  158 (213)
                      |++||+||+|+|||||||+||+||++++++|++.++....+++++.  ..|+++||+++|++|+++||||      ++|+
T Consensus         2 ~~~Yfa~k~N~lN~~FVK~gW~WTt~~~~~~i~~~s~~~~~~~~~~~~~~~~l~Ry~v~T~~W~~~TqWffG~pi~drif   81 (238)
T PF10261_consen    2 PYSYFANKDNILNQYFVKRGWFWTTLVFWPFILLYSSPYSRSNRSRLRVKRALLRYAVATLWWYLFTQWFFGPPIFDRIF   81 (238)
T ss_pred             CcceeccCCCchhHHHHHHhHHHHHHHHHHHHHheeccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHhhH
Confidence            6899999999999999999999999999999887776555443333  5789999999999999999955      5666


Q ss_pred             h-hhccccCCCC-----------------------CChhHHhhcCCCcc-ccccchhHHHHHHHHHHHHHH-hhh
Q psy14832        159 S-IYGRCTEPRF-----------------------SRRSKCLEAGARWS-GFDISGHSFLLIYSVLIMIEE-AKP  207 (213)
Q Consensus       159 ~-tgG~C~~~~~-----------------------~s~~~C~~~Gg~W~-GfDiSGH~FLLi~ssLlL~~E-l~~  207 (213)
                      + |||+|+.++.                       .++++|+++||+|+ |||||||+|||++|+|+|++| +.+
T Consensus        82 ~~TGG~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~GG~W~gG~DiSGH~FLL~~~sl~L~~E~l~~  156 (238)
T PF10261_consen   82 VWTGGKCSFSSFDSAGPVNSLFQDSSQDSLLLSEIISSAACRRAGGSWRGGHDISGHVFLLILSSLFLWEESLSP  156 (238)
T ss_pred             hhcCCccCCCCccccccccccccccccccccccccccHHHHhhCcCeeCCCcCCCccchHHHHHHHHHHHHHHHH
Confidence            6 7889986543                       69999999999998 999999999999999999999 544



They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.

>KOG3750|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00