Psyllid ID: psy15185

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-
MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNKQPLDDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
cHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHEEccccccEEEEccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHEEEEEEEEcc
ccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcHHHEEEEEEHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHccccHHHHHHHHHHHHHHEEcccHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEccHHcccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccccHHHHHHEEEHHEHccc
MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELckkkrvpilnypdsMRVAlqqgppclrfaANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFssnkqplddstpydphkhrvlehattnNETLIHLLKGslgtgilampnafvnsglvigTVGTILIGILCTYCLHVLVRSQYELckkkrvpilnypdsMRVAlqqgppclrfaANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLiginsirnlkllapfsqLANVITFIGLGITMYYIcqalppvssrpyfgdprnwnlfiGTTLFALEAVGVVIALennmktpasfggyygvLNQGMFAIVIMYVIMGFLGYVKygsaaqgsvtlnlpkedIIGIVLAVLVPRLELFISLFGAFCLsalgiafpGIIEMCvlwpdqfgpfkfILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALEnnmktpasfggyygvLNQGMFAIVIMYVIMGFLGYVKygsaaqgsvtlnlpkediLAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNKQPLDDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLenatpgkkllVEYIMRVSVVGSK
MPNAFVNSglvigtvgtiligilCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNKQPLDDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSglvigtvgtiligilCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFilirdilliiggifalilgtfiSLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
****FVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFS******************VLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVV***
MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKK*VPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNKQPLDDSTPYDPHK*R***H*TTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNKQPLDDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNK*****STPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVSIYYFSSNKQPLDDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIVRSFKLDLSMNYVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDILAQSVNAIFAVAIFISYGLQCYVPVEIIWSRYLKQHLENATPGKKLLVEYIMRVSVVGSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query611 2.2.26 [Sep-21-2011]
Q924A5475 Proton-coupled amino acid yes N/A 0.620 0.797 0.314 1e-50
Q8K4D3475 Proton-coupled amino acid yes N/A 0.628 0.808 0.313 9e-50
Q8CH36500 Proton-coupled amino acid no N/A 0.603 0.738 0.288 8e-49
Q7Z2H8476 Proton-coupled amino acid yes N/A 0.625 0.802 0.290 8e-48
Q6YBV0504 Proton-coupled amino acid no N/A 0.603 0.732 0.295 1e-47
Q495M3483 Proton-coupled amino acid no N/A 0.607 0.768 0.298 5e-47
Q4KL91522 Proton-coupled amino acid N/A N/A 0.612 0.716 0.289 1e-46
Q8BHK3478 Proton-coupled amino acid no N/A 0.564 0.721 0.311 2e-46
Q8K415481 Proton-coupled amino acid no N/A 0.564 0.717 0.315 1e-43
Q811P0477 Proton-coupled amino acid no N/A 0.559 0.716 0.292 4e-42
>sp|Q924A5|S36A1_RAT Proton-coupled amino acid transporter 1 OS=Rattus norvegicus GN=Slc36a1 PE=2 SV=1 Back     alignment and function desciption
 Score =  201 bits (512), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 230/455 (50%), Gaps = 76/455 (16%)

Query: 107 SSNKQPLDDSTPYDPHKHRVL--EHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIG 164
           S  + P +    + P  ++ L    + T  +TLIHLLKG++GTG+L +P A  N+GL++G
Sbjct: 20  SPEESPSEGLGSFSPGSYQRLGENSSMTWFQTLIHLLKGNIGTGLLGLPLAVKNAGLLLG 79

Query: 165 TVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPC-LRFAANASA 223
            +  ++IGI+  +C+ +LV+  + LC++   P L+Y D++   L+  P   +R  ++   
Sbjct: 80  PLSLLVIGIVAVHCMGILVKCAHHLCRRLNKPFLDYGDTVMYGLECSPSTWIRNHSHWGR 139

Query: 224 IIVDMFLIVYQLGICCVYIMFVATNIKPVTDA---------------YIAVMDVRIVMVL 268
            IVD FL+V QLG CCVY +F+A N K V +A                   MD R+ M+ 
Sbjct: 140 RIVDFFLVVTQLGFCCVYFVFLADNFKQVIEAANGTTTNCNNNETVILTPTMDSRLYMLT 199

Query: 269 LLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNL 328
            L  L+ ++ IRNL++L+ FS LAN+  F+ L +   +I Q +P  S  P     + + L
Sbjct: 200 FLPFLVLLSFIRNLRILSIFSLLANISMFVSLIMIYQFIVQRIPDPSHLPLVAPWKTYPL 259

Query: 329 FIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSA 388
           F GT +FA E +GVV+ LEN MK    F     +L  GM  I ++Y+ +G LGY+++G+ 
Sbjct: 260 FFGTAIFAFEGIGVVLPLENKMKDSQKFP---LILYLGMAIITVLYISLGSLGYLQFGAD 316

Query: 389 AQGSVTLNLPK---------------------------EDIIGIVLA------------- 408
            +GS+TLNLP                            E II  +++             
Sbjct: 317 IKGSITLNLPNCWLYQSVKLLYSIGIFFTYALQFYVAAEIIIPAIVSRVPERFELVVDLS 376

Query: 409 -------------VLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILI 455
                        VL+PRL+L ISL G+   SAL +  P ++E+   + +   P    + 
Sbjct: 377 ARTAMVCVTCVLAVLIPRLDLVISLVGSVSSSALALIIPPLLEVTTYYGEGISPLT--IT 434

Query: 456 RDILLIIGGIFALILGTFISLQDIVRSFKLDLSMN 490
           +D L+ I G    ++GT+ SL ++++    D S N
Sbjct: 435 KDALISILGFVGFVVGTYESLWELIQPSHSDSSTN 469
Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.
Rattus norvegicus (taxid: 10116)
>sp|Q8K4D3|S36A1_MOUSE Proton-coupled amino acid transporter 1 OS=Mus musculus GN=Slc36a1 PE=2 SV=1 Back     alignment and function description
>sp|Q8CH36|S36A4_MOUSE Proton-coupled amino acid transporter 4 OS=Mus musculus GN=Slc36a4 PE=2 SV=1 Back     alignment and function description
>sp|Q7Z2H8|S36A1_HUMAN Proton-coupled amino acid transporter 1 OS=Homo sapiens GN=SLC36A1 PE=1 SV=1 Back     alignment and function description
>sp|Q6YBV0|S36A4_HUMAN Proton-coupled amino acid transporter 4 OS=Homo sapiens GN=SLC36A4 PE=1 SV=1 Back     alignment and function description
>sp|Q495M3|S36A2_HUMAN Proton-coupled amino acid transporter 2 OS=Homo sapiens GN=SLC36A2 PE=1 SV=1 Back     alignment and function description
>sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1 Back     alignment and function description
>sp|Q8BHK3|S36A2_MOUSE Proton-coupled amino acid transporter 2 OS=Mus musculus GN=Slc36a2 PE=1 SV=1 Back     alignment and function description
>sp|Q8K415|S36A2_RAT Proton-coupled amino acid transporter 2 OS=Rattus norvegicus GN=Slc36a2 PE=1 SV=1 Back     alignment and function description
>sp|Q811P0|S36A3_MOUSE Proton-coupled amino acid transporter 3 OS=Mus musculus GN=Slc36a3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query611
345495708471 PREDICTED: proton-coupled amino acid tra 0.605 0.785 0.573 1e-131
307204533467 Proton-coupled amino acid transporter 1 0.612 0.800 0.573 1e-126
307189898481 Proton-coupled amino acid transporter 1 0.613 0.779 0.553 1e-123
350402512467 PREDICTED: proton-coupled amino acid tra 0.612 0.800 0.552 1e-122
332025159501 Proton-coupled amino acid transporter 4 0.605 0.738 0.551 1e-120
66513394466 PREDICTED: proton-coupled amino acid tra 0.617 0.809 0.545 1e-120
383861318467 PREDICTED: proton-coupled amino acid tra 0.612 0.800 0.545 1e-119
328715506463 PREDICTED: proton-coupled amino acid tra 0.472 0.624 0.731 1e-118
170050814454 amino acid transporter [Culex quinquefas 0.603 0.812 0.543 1e-115
242022476459 proton-coupled amino acid transporter, p 0.615 0.819 0.548 1e-113
>gi|345495708|ref|XP_003427558.1| PREDICTED: proton-coupled amino acid transporter 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/424 (57%), Positives = 299/424 (70%), Gaps = 54/424 (12%)

Query: 115 DSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGIL 174
           +S  YDPH+HR   H TTN ETLIHLLKGSLGTGILAMPNAF NSGLV GTV T++IGIL
Sbjct: 41  ESPEYDPHQHRNRPHPTTNTETLIHLLKGSLGTGILAMPNAFCNSGLVTGTVATVIIGIL 100

Query: 175 CTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQ 234
           CTYCLH+LV++QYELCK+ +VPILNYP SM+VAL+QGPP LR  A++S IIVD FLIVYQ
Sbjct: 101 CTYCLHILVKAQYELCKRLKVPILNYPQSMKVALEQGPPSLRKFAHSSPIIVDAFLIVYQ 160

Query: 235 LGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAPFSQLANV 294
           LGICCVYI+FVATNIK V D Y   +DV++ M++LL+PL  IN IRNLKLLAPFS +AN+
Sbjct: 161 LGICCVYIVFVATNIKQVADQYCEPIDVKLHMLILLIPLTVINYIRNLKLLAPFSSVANI 220

Query: 295 ITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPA 354
           ITF+GLG+ + Y+   LP ++ R  FG  RN++L+ GTTLFALEAVGV+IALENNMKTP 
Sbjct: 221 ITFVGLGMILAYVFDDLPSITEREMFGSVRNFSLYFGTTLFALEAVGVIIALENNMKTPQ 280

Query: 355 SFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVL---- 410
           +F G +GVLN GM  IV++Y+++GF GY+KYG  A GS+TLNLP + ++   + V+    
Sbjct: 281 NFRGTFGVLNVGMLVIVVLYILVGFFGYIKYGPDASGSITLNLPMDAVMAQSIKVMFAVA 340

Query: 411 ------------------------VPRLELF--------------------------ISL 420
                                   + + +LF                          ISL
Sbjct: 341 IFITYALQAYVPVEIIWTTYLDHRIKKNKLFWEYIVRTLVTLTTFILAIAVPRLGLFISL 400

Query: 421 FGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDILLIIGGIFALILGTFISLQDIV 480
           FGA CLSALGIAFP IIE+CVLWP  FGPFK  LI+DI LII G   LI+GT++SL DI+
Sbjct: 401 FGALCLSALGIAFPAIIEICVLWPHNFGPFKVALIKDIGLIIFGCIGLIVGTYVSLGDII 460

Query: 481 RSFK 484
            SF+
Sbjct: 461 ASFQ 464

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307204533|gb|EFN83213.1| Proton-coupled amino acid transporter 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307189898|gb|EFN74142.1| Proton-coupled amino acid transporter 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|350402512|ref|XP_003486512.1| PREDICTED: proton-coupled amino acid transporter 1-like isoform 1 [Bombus impatiens] gi|350402515|ref|XP_003486513.1| PREDICTED: proton-coupled amino acid transporter 1-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|332025159|gb|EGI65339.1| Proton-coupled amino acid transporter 4 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|66513394|ref|XP_393138.2| PREDICTED: proton-coupled amino acid transporter 1-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|383861318|ref|XP_003706133.1| PREDICTED: proton-coupled amino acid transporter 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328715506|ref|XP_001945852.2| PREDICTED: proton-coupled amino acid transporter 4-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|170050814|ref|XP_001861480.1| amino acid transporter [Culex quinquefasciatus] gi|167872282|gb|EDS35665.1| amino acid transporter [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|242022476|ref|XP_002431666.1| proton-coupled amino acid transporter, putative [Pediculus humanus corporis] gi|212516974|gb|EEB18928.1| proton-coupled amino acid transporter, putative [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query611
FB|FBgn0036116465 CG7888 [Drosophila melanogaste 0.528 0.694 0.487 4.8e-95
FB|FBgn0035300451 CG1139 [Drosophila melanogaste 0.510 0.691 0.455 5.7e-86
FB|FBgn0032036504 CG13384 [Drosophila melanogast 0.494 0.599 0.425 2.9e-68
FB|FBgn0036007500 path "pathetic" [Drosophila me 0.531 0.65 0.408 4.7e-68
FB|FBgn0033760474 CG8785 [Drosophila melanogaste 0.492 0.635 0.370 1.1e-60
FB|FBgn0052079457 CG32079 [Drosophila melanogast 0.476 0.636 0.339 1.4e-56
WB|WBGene00012804455 Y43F4B.7 [Caenorhabditis elega 0.443 0.595 0.327 7.7e-52
UNIPROTKB|E2RHF1476 SLC36A1 "Uncharacterized prote 0.436 0.560 0.370 1.4e-50
FB|FBgn0033572460 CG12943 [Drosophila melanogast 0.486 0.645 0.335 2.9e-50
RGD|619801475 Slc36a1 "solute carrier family 0.427 0.549 0.364 7.7e-50
FB|FBgn0036116 CG7888 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 816 (292.3 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
 Identities = 159/326 (48%), Positives = 213/326 (65%)

Query:   109 NKQPLDDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSXXXXXXXXX 168
             NK  +     Y+P+ HR +EH TTN+ETL HLLKGSLGTGILAMPNAF NS         
Sbjct:    31 NKAVVAKDPDYNPYHHRDVEHPTTNSETLFHLLKGSLGTGILAMPNAFRNSGYITGSIGT 90

Query:   169 XXXXXXCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDM 228
                   CT+C+H LV++QYELC++K++P +NYP     A+ +GP C R  A     +V+ 
Sbjct:    91 IVIGFICTFCIHQLVKAQYELCRRKKMPSMNYPMVAETAMGEGPKCFRVFAPYIGTVVNT 150

Query:   229 FLIVYQLGICCVYIMFVATNIKPVTDAYIAV-MDVRIVMVLLLLPLIGINSIRNLKLLAP 287
             FL++YQLG CCVY++FVA+NIK + DA     +DVR+ M+++LLPLI IN +RNLK LAP
Sbjct:   151 FLLIYQLGTCCVYVVFVASNIKAIVDAVADTSIDVRLCMIIILLPLILINWVRNLKYLAP 210

Query:   288 FSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALE 347
             FS LAN IT +  GI  YYI +       +  FG P N+ LF GT LFALEA+GV++ LE
Sbjct:   211 FSTLANAITMVSFGIICYYIFREPVTTEGKDAFGKPSNFPLFFGTVLFALEAIGVILPLE 270

Query:   348 NNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVL 407
             N MKTP  FGG  GVLN  M  IV +YV MG  GY+ YGSA  GS+TLN+P+ +++ + +
Sbjct:   271 NEMKTPQKFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGSAVLGSITLNMPEHEVLSMCV 330

Query:   408 AVLVPRLELFISLFGAFCLSALGIAF 433
               ++    ++I+  G  C  A+ I +
Sbjct:   331 KGMLA-FAIYIT-HGLACYVAIDITW 354
GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS
GO:0003333 "amino acid transmembrane transport" evidence=ISS
FB|FBgn0035300 CG1139 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0032036 CG13384 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0036007 path "pathetic" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0033760 CG8785 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0052079 CG32079 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00012804 Y43F4B.7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E2RHF1 SLC36A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0033572 CG12943 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|619801 Slc36a1 "solute carrier family 36 (proton/amino acid symporter), member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q924A5S36A1_RATNo assigned EC number0.31420.62020.7978yesN/A
Q8K4D3S36A1_MOUSENo assigned EC number0.31300.62840.8084yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
pfam01490406 pfam01490, Aa_trans, Transmembrane amino acid tran 4e-35
pfam01490406 pfam01490, Aa_trans, Transmembrane amino acid tran 7e-16
COG0814415 COG0814, SdaC, Amino acid permeases [Amino acid tr 7e-12
pfam01490406 pfam01490, Aa_trans, Transmembrane amino acid tran 1e-06
>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein Back     alignment and domain information 
 Score =  136 bits (345), Expect = 4e-35
 Identities = 66/290 (22%), Positives = 136/290 (46%), Gaps = 17/290 (5%)

Query: 129 HATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYE 188
              +  + + +L+K  +G G+L++P AF   G + G +  +++G++  Y LH+LV+    
Sbjct: 1   GTISAWQAVFNLIKAIIGAGVLSLPYAFKQLGWIPGLILLVIVGLISLYTLHLLVQCSKY 60

Query: 189 LCKKKRVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATN 248
           + K K     +Y D                     +++   ++V   G+C  Y++F   N
Sbjct: 61  VDKVKGKRRKSYGDLGYRLF----------GPKGKLLILFAILVNLFGVCISYLIFAGDN 110

Query: 249 IKPVTDAYIAVMDVRIV--MVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMY- 305
           +  + D++     + +V  +++  L  I ++ I NL  L+  S +A V +   + + +  
Sbjct: 111 LPAIFDSFFDTCHISLVYFIIIFGLIFIPLSFIPNLSALSILSLVAAVSSLYIVILVLSV 170

Query: 306 --YICQALPPVSSR--PYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYG 361
                     V S             L IG  +FA E   V++ ++N MK+P+ F     
Sbjct: 171 AELGVLTAQGVGSLGAKTNIKLARLFLAIGIIVFAFEGHAVLLPIQNTMKSPSKFKAMTK 230

Query: 362 VLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGIVLAVLV 411
           VL   +  + ++Y+++G +GY+ +G+  +G++ LNLPK D +  +  +L+
Sbjct: 231 VLLTAIIIVTVLYILVGLVGYLAFGNNVKGNILLNLPKSDWLIDIANLLL 280

This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases. Length = 406
>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein Back     alignment and domain information
>gnl|CDD|223884 COG0814, SdaC, Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 611
KOG1304|consensus449 100.0
PTZ00206467 amino acid transporter; Provisional 100.0
KOG1303|consensus437 100.0
PLN03074473 auxin influx permease; Provisional 100.0
PF01490409 Aa_trans: Transmembrane amino acid transporter pro 100.0
KOG1305|consensus411 100.0
KOG4303|consensus524 100.0
COG0814415 SdaC Amino acid permeases [Amino acid transport an 99.97
KOG1304|consensus449 99.94
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 99.82
PRK10483414 tryptophan permease; Provisional 99.8
PRK15132403 tyrosine transporter TyrP; Provisional 99.78
TIGR00837381 araaP aromatic amino acid transport protein. aroma 99.78
PRK09664415 tryptophan permease TnaB; Provisional 99.77
PRK13629443 threonine/serine transporter TdcC; Provisional 99.59
TIGR00814397 stp serine transporter. The HAAAP family includes 99.45
KOG4303|consensus524 99.39
KOG1303|consensus437 99.31
PLN03074 473 auxin influx permease; Provisional 99.3
PTZ00206467 amino acid transporter; Provisional 99.27
PF01490409 Aa_trans: Transmembrane amino acid transporter pro 99.24
PRK10655438 potE putrescine transporter; Provisional 99.07
TIGR00930 953 2a30 K-Cl cotransporter. 99.03
TIGR00909429 2A0306 amino acid transporter. 98.99
TIGR00906557 2A0303 cationic amino acid transport permease. 98.99
KOG3832|consensus319 98.97
TIGR00912359 2A0309 spore germination protein (amino acid perme 98.97
PRK10644445 arginine:agmatin antiporter; Provisional 98.96
TIGR00905473 2A0302 transporter, basic amino acid/polyamine ant 98.9
PRK10435435 cadB lysine/cadaverine antiporter; Provisional 98.86
TIGR00908442 2A0305 ethanolamine permease. The three genes used 98.84
TIGR03810468 arg_ornith_anti arginine/ornithine antiporter. Mem 98.82
PRK10249458 phenylalanine transporter; Provisional 98.81
KOG1287|consensus479 98.81
TIGR00911501 2A0308 L-type amino acid transporter. 98.79
PRK15049499 L-asparagine permease; Provisional 98.78
PRK11021410 putative transporter; Provisional 98.77
TIGR01773452 GABAperm gamma-aminobutyrate permease. GabP is hig 98.76
PRK11049469 D-alanine/D-serine/glycine permease; Provisional 98.71
PRK11387471 S-methylmethionine transporter; Provisional 98.7
PRK10746461 putative transport protein YifK; Provisional 98.69
PRK10836489 lysine transporter; Provisional 98.64
KOG1305|consensus411 98.62
TIGR00913478 2A0310 amino acid permease (yeast). 98.62
PRK10238456 aromatic amino acid transporter; Provisional 98.57
PRK10580457 proY putative proline-specific permease; Provision 98.56
PF13520426 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G 98.54
PRK11357445 frlA putative fructoselysine transporter; Provisio 98.51
PF03845320 Spore_permease: Spore germination protein; InterPr 98.49
COG0531466 PotE Amino acid transporters [Amino acid transport 98.42
COG1113462 AnsP Gamma-aminobutyrate permease and related perm 98.35
PRK10197446 gamma-aminobutyrate transporter; Provisional 98.34
TIGR00907482 2A0304 amino acid permease (GABA permease). 98.11
TIGR03428475 ureacarb_perm permease, urea carboxylase system. A 97.94
COG0814415 SdaC Amino acid permeases [Amino acid transport an 97.91
KOG1286|consensus554 97.85
TIGR00800442 ncs1 NCS1 nucleoside transporter family. The NCS1 97.75
COG0833541 LysP Amino acid transporters [Amino acid transport 97.7
KOG1289|consensus550 97.7
PF00324478 AA_permease: Amino acid permease; InterPro: IPR004 97.58
PRK15238496 inner membrane transporter YjeM; Provisional 97.52
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 97.3
TIGR00910507 2A0307_GadC glutamate:gamma-aminobutyrate antiport 97.13
PRK12488549 acetate permease; Provisional 97.08
PRK11375484 allantoin permease; Provisional 97.02
COG3949349 Uncharacterized membrane protein [Function unknown 97.01
PF02554376 CstA: Carbon starvation protein CstA; InterPro: IP 96.99
TIGR02358386 thia_cytX probable hydroxymethylpyrimidine transpo 96.87
PF00474406 SSF: Sodium:solute symporter family; InterPro: IPR 96.86
PRK09442483 panF sodium/panthothenate symporter; Provisional 96.68
PRK15419502 proline:sodium symporter PutP; Provisional 96.65
COG1457442 CodB Purine-cytosine permease and related proteins 96.64
TIGR02711549 symport_actP cation/acetate symporter ActP. Member 96.42
TIGR02119471 panF sodium/pantothenate symporter. Pantothenate ( 96.4
TIGR00835425 agcS amino acid carrier protein. Members of the AG 96.35
PRK09395551 actP acetate permease; Provisional 96.12
COG1966575 CstA Carbon starvation protein, predicted membrane 96.11
TIGR00837381 araaP aromatic amino acid transport protein. aroma 96.03
COG0591493 PutP Na+/proline symporter [Amino acid transport a 96.03
TIGR00813407 sss transporter, SSS family. have different number 95.92
PRK15015 701 carbon starvation protein A; Provisional 95.51
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 95.34
TIGR02121487 Na_Pro_sym sodium/proline symporter. This family c 95.02
PRK11017404 codB cytosine permease; Provisional 94.55
PF02133440 Transp_cyt_pur: Permease for cytosine/purines, ura 92.14
PRK15132403 tyrosine transporter TyrP; Provisional 91.12
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 87.86
TIGR03648552 Na_symport_lg probable sodium:solute symporter, VC 86.96
PRK13629443 threonine/serine transporter TdcC; Provisional 86.4
COG1914416 MntH Mn2+ and Fe2+ transporters of the NRAMP famil 85.39
PRK00701439 manganese transport protein MntH; Reviewed 83.52
PF01235416 Na_Ala_symp: Sodium:alanine symporter family; Inte 83.43
>KOG1304|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.2e-61  Score=497.11  Aligned_cols=365  Identities=46%  Similarity=0.872  Sum_probs=346.2

Q ss_pred             CCCCCCCCCCccccCCCCCHHHHHHHHHhhhhccccchhHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy15185        114 DDSTPYDPHKHRVLEHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKK  193 (611)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~s~~~a~~~l~~~~iG~GiL~LP~af~~~G~~~giill~~~~~ls~~t~~lL~~~~~~~~~~~  193 (611)
                      .++++.+|..+++.++..|..++..|+.|.++|+|+|++|+||+++||+.|.+..++++.++.||++.+++|.++.++|.
T Consensus        30 ~~d~~~~~~~~~~~~~~~s~~~tl~hl~k~~iGtG~l~lP~AFk~sG~~~G~~~~~~i~~l~~yc~~~LVk~~~~L~~~~  109 (449)
T KOG1304|consen   30 PNDGDYSPLQLRDREHPTSATQTLIHLLKGSIGTGILSLPLAFKNSGLVMGLLLTVFIGFLCTYCMHLLVKCSHKLCKRF  109 (449)
T ss_pred             CCCCCCCccccccCCCCCchHHHHHHHHHhhhccccccChHHHHhcchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence            44556677777777888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHhhHHHHHHhhcc-cchHHHHHHHHHHH
Q psy15185        194 RVPILNYPDSMRVALQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIA-VMDVRIVMVLLLLP  272 (611)
Q Consensus       194 ~~~~~sy~~l~~~~~~~G~~~~~~~G~~g~~~v~i~~~~~~~g~~i~Y~i~~~~~l~~l~~~~~~-~~~~~~~~~i~~~~  272 (611)
                      +++..+|++.++.+++.||.|.+.+|+++|.++++++.++|+|.|++|+++++++++++.+.... .++.+.++++.++|
T Consensus       110 ~~~~~~y~~~~~~a~~~~~~~~r~~g~~~r~~V~~~L~i~QlGfc~vY~VFva~nl~~i~~~~~~~~~s~~~~i~~~~~~  189 (449)
T KOG1304|consen  110 RGPSLDYAETAESAMEGGPGWLRKYGPAARFVVNFFLVITQLGFCCVYLVFVATNLKQIVDEHSPGVLSVRLYILIQLPP  189 (449)
T ss_pred             CCccccHHHHHHHHHcCCcHHHHhhcHHHHHHHHHHHHHHHhchhhEEeeeHHhhHHHHHhccCCCCccHHHHHHHHHHH
Confidence            88899999999999999999999999999999999999999999999999999999999995443 88999999999999


Q ss_pred             HHHhhcccccchhhhHHHHHHHHHHHHHHhhhheecccCCCCCCCCCcCCcchhhHHHHHHHHhcccccchhcchhhccC
Q psy15185        273 LIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPRNWNLFIGTTLFALEAVGVVIALENNMKT  352 (611)
Q Consensus       273 ~~~l~~~~~l~~l~~~s~~~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~faf~~~~~i~~i~~~mk~  352 (611)
                      +.+++++||+|+++++|++|+++++.+++++.+|...+.++.++.+...++.+++.++|+.+|||++++++.|++++||+
T Consensus       190 ~lll~~Ir~Lk~Lsp~Sl~Anv~~~~g~~ii~~y~~~~~~~~~~~~~~~~~~~~~lf~GtaifafEGig~VLPlEn~Mk~  269 (449)
T KOG1304|consen  190 LLLLNLIRNLKILSPFSLFANVFILVGLAIIMYYLVQDLPPTSDLPAVTGWSGLPLFFGTAIFAFEGIGMVLPLENSMKK  269 (449)
T ss_pred             HHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHhccCCccccccccchhhhHHHHHHHHHHhccceEEEehhhcccC
Confidence            99999999999999999999999999999999999999998888888888999999999999999999999999999999


Q ss_pred             CcccCccchhhhhHHHHHHHHHHHHHhHhhhhcCcccccccccccCCcCHHHH---------------------------
Q psy15185        353 PASFGGYYGVLNQGMFAIVIMYVIMGFLGYVKYGSAAQGSVTLNLPKEDIIGI---------------------------  405 (611)
Q Consensus       353 p~~~~~~~~v~~~a~~i~~~~Y~~~g~~GY~~fG~~~~~~il~n~p~~~~~~~---------------------------  405 (611)
                      |++|..+++++..+|.+++++|..+|++||++||+++++.|++|+|+ +++.|                           
T Consensus       270 P~~F~g~~gVLn~~M~~V~~ly~~~Gf~GYl~fG~~v~~sITLNLP~-~~l~~~Vkl~~ai~I~ls~pLQ~yv~~eIi~~  348 (449)
T KOG1304|consen  270 PQKFPGPFGVLNLGMGIVTLLYIFLGFFGYLAFGDDVKGSITLNLPQ-EILSQTVKLLLAIAIFLTYPLQFYVPIEIIEP  348 (449)
T ss_pred             hhhcCCccchHHHHHHHHHHHHHHHHHHHHhhccccccceEEecCCc-cHHHHHHHHHHHHHHHHcCchhhhhhHHHHHH
Confidence            99999777799999999999999999999999999999999999999 66543                           


Q ss_pred             ---------------------------HHHHhccchhhhHHHHhhhHHHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHH
Q psy15185        406 ---------------------------VLAVLVPRLELFISLFGAFCLSALGIAFPGIIEMCVLWPDQFGPFKFILIRDI  458 (611)
Q Consensus       406 ---------------------------iiA~~ip~~~~il~l~Ga~~~~~l~filP~l~~l~~~~~~~~~~~~~~~~~~~  458 (611)
                                                 .+|.++||++.+++++||++++.+.+++|+++|++.+|.+.++..+|+.+.|+
T Consensus       349 ~i~~k~~~~~~~~~~~~~R~~lVllt~~iA~~iPnL~~fisLVGs~~~s~L~li~P~liel~~~~~~~~~~~~~~~~~ni  428 (449)
T KOG1304|consen  349 GIRKKFSENRKKLLEYALRVFLVLLTFLIAVAVPNLALFISLVGSVSCSLLALIFPPLIELITFYPEGKGRFMWKLIKNI  428 (449)
T ss_pred             hHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHCCcHHhhHHHHHHHHHHHHHHHccHHHHHHHhcccccCceehHHHHHH
Confidence                                       68889999999999999999999999999999999999987778889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q psy15185        459 LLIIGGIFALILGTFISLQDI  479 (611)
Q Consensus       459 ~i~~~Gi~~~v~gt~~si~~i  479 (611)
                      +++++|++.++.|||.+++++
T Consensus       429 ~l~~~G~~~~v~Gty~si~~i  449 (449)
T KOG1304|consen  429 VLIVFGVFGFVYGTYTSIKEI  449 (449)
T ss_pred             HHHHHHHHHHHHHHhhhhhcC
Confidence            999999999999999999874

>PTZ00206 amino acid transporter; Provisional Back     alignment and domain information
>KOG1303|consensus Back     alignment and domain information
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information
>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR) Back     alignment and domain information
>KOG1305|consensus Back     alignment and domain information
>KOG4303|consensus Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1304|consensus Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PRK10483 tryptophan permease; Provisional Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>PRK09664 tryptophan permease TnaB; Provisional Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>TIGR00814 stp serine transporter Back     alignment and domain information
>KOG4303|consensus Back     alignment and domain information
>KOG1303|consensus Back     alignment and domain information
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information
>PTZ00206 amino acid transporter; Provisional Back     alignment and domain information
>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR) Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>TIGR00906 2A0303 cationic amino acid transport permease Back     alignment and domain information
>KOG3832|consensus Back     alignment and domain information
>TIGR00912 2A0309 spore germination protein (amino acid permease) Back     alignment and domain information
>PRK10644 arginine:agmatin antiporter; Provisional Back     alignment and domain information
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>PRK10435 cadB lysine/cadaverine antiporter; Provisional Back     alignment and domain information
>TIGR00908 2A0305 ethanolamine permease Back     alignment and domain information
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter Back     alignment and domain information
>PRK10249 phenylalanine transporter; Provisional Back     alignment and domain information
>KOG1287|consensus Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>PRK15049 L-asparagine permease; Provisional Back     alignment and domain information
>PRK11021 putative transporter; Provisional Back     alignment and domain information
>TIGR01773 GABAperm gamma-aminobutyrate permease Back     alignment and domain information
>PRK11049 D-alanine/D-serine/glycine permease; Provisional Back     alignment and domain information
>PRK11387 S-methylmethionine transporter; Provisional Back     alignment and domain information
>PRK10746 putative transport protein YifK; Provisional Back     alignment and domain information
>PRK10836 lysine transporter; Provisional Back     alignment and domain information
>KOG1305|consensus Back     alignment and domain information
>TIGR00913 2A0310 amino acid permease (yeast) Back     alignment and domain information
>PRK10238 aromatic amino acid transporter; Provisional Back     alignment and domain information
>PRK10580 proY putative proline-specific permease; Provisional Back     alignment and domain information
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A Back     alignment and domain information
>PRK11357 frlA putative fructoselysine transporter; Provisional Back     alignment and domain information
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10197 gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information
>TIGR03428 ureacarb_perm permease, urea carboxylase system Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1286|consensus Back     alignment and domain information
>TIGR00800 ncs1 NCS1 nucleoside transporter family Back     alignment and domain information
>COG0833 LysP Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1289|consensus Back     alignment and domain information
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PRK15238 inner membrane transporter YjeM; Provisional Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>PRK12488 acetate permease; Provisional Back     alignment and domain information
>PRK11375 allantoin permease; Provisional Back     alignment and domain information
>COG3949 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex Back     alignment and domain information
>TIGR02358 thia_cytX probable hydroxymethylpyrimidine transporter CytX Back     alignment and domain information
>PF00474 SSF: Sodium:solute symporter family; InterPro: IPR001734 Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells Back     alignment and domain information
>PRK09442 panF sodium/panthothenate symporter; Provisional Back     alignment and domain information
>PRK15419 proline:sodium symporter PutP; Provisional Back     alignment and domain information
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR02711 symport_actP cation/acetate symporter ActP Back     alignment and domain information
>TIGR02119 panF sodium/pantothenate symporter Back     alignment and domain information
>TIGR00835 agcS amino acid carrier protein Back     alignment and domain information
>PRK09395 actP acetate permease; Provisional Back     alignment and domain information
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>COG0591 PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00813 sss transporter, SSS family Back     alignment and domain information
>PRK15015 carbon starvation protein A; Provisional Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR02121 Na_Pro_sym sodium/proline symporter Back     alignment and domain information
>PRK11017 codB cytosine permease; Provisional Back     alignment and domain information
>PF02133 Transp_cyt_pur: Permease for cytosine/purines, uracil, thiamine, allantoin; InterPro: IPR001248 The Nucleobase Cation Symporter-1 (NCS1) family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK00701 manganese transport protein MntH; Reviewed Back     alignment and domain information
>PF01235 Na_Ala_symp: Sodium:alanine symporter family; InterPro: IPR001463 Sodium symporters can be divided by sequence and functional similarity into various groups Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.2 bits (111), Expect = 2e-05
 Identities = 81/593 (13%), Positives = 158/593 (26%), Gaps = 220/593 (37%)

Query: 34  SQYELCKKKRVPIL-----------NYPDSMRVAL---------QQGPPCLRFAANASAI 73
            +++   K  + +            +  D  +  L                      +  
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG-----TLR 66

Query: 74  IVDMFLIVYQLGICCVYIMFVATNIKPVSIYYF------SSNKQPLDDSTPY-------- 119
           +    L   Q  +      FV   ++    Y F      +  +QP   +  Y        
Sbjct: 67  LFWTLL-SKQEEM---VQKFVEEVLRIN--YKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 120 -DPH---KHRV--LEHATTNNETLIHL-------LKGSLGTG--ILA------------M 152
            D     K+ V  L+      + L+ L       + G LG+G   +A            M
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 153 PNA-F-VNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPD-----SMR 205
               F +N      +  T+L  +L     + +  +            L            
Sbjct: 181 DFKIFWLNLKNC-NSPETVLE-MLQKLL-YQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 206 VALQQGPPCLRFAAN-ASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRI 264
           +  +    CL    N  +A   + F       + C   + + T  K VTD   A     I
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAF------NLSCK--ILLTTRFKQVTDFLSAATTTHI 289

Query: 265 VMVLLLLPLIGINSIRNLKLLAPFSQLANVITFIGLGITMYYICQALPPVSSRPYFGDPR 324
            +    + L          LL  +           L        Q LP         +P 
Sbjct: 290 SLDHHSMTLTPDEV---KSLLLKY-----------LDCR----PQDLPREVLT---TNP- 327

Query: 325 NWNLFIGTTLFALEAVGVVIALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGYVK 384
                +   + A         + + + T                               K
Sbjct: 328 ---RRLS--IIAES-------IRDGLAT---------------------------WDNWK 348

Query: 385 YGSAAQGSVTLNLPK-EDIIGIVLAVLVPRL--ELFISLFGAFCLSALGIAFP---GIIE 438
           +         +N  K   II   L VL P    ++F  L          + FP    I  
Sbjct: 349 H---------VNCDKLTTIIESSLNVLEPAEYRKMFDRLS---------V-FPPSAHIPT 389

Query: 439 --MCVLWPDQFGPFKFILIRDILLIIGGI--FALILG----TFISLQDIVRSFKL----D 486
             + ++W D       ++  D+++++  +  ++L+      + IS+  I    K+    +
Sbjct: 390 ILLSLIWFD-------VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442

Query: 487 LSMN------YVI--ALENNMKTPASFGGYYGVLNQGMFAIVIMYVIMGFLGY 531
            +++      Y I    +++   P     Y+             Y     +G+
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-------------Y---SHIGH 479

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query611
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 99.32
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 98.97
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 98.67
2jln_A501 MHP1; hydantoin, transporter, membrane protein, nu 97.7
3dh4_A530 Sodium/glucose cotransporter; membrane protein, sy 95.32
2xq2_A593 Sodium/glucose cotransporter; transport protein, i 93.74
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure
Probab=99.32  E-value=4.7e-10  Score=120.66  Aligned_cols=241  Identities=11%  Similarity=0.041  Sum_probs=154.1

Q ss_pred             CCCCCHHHHHHHHHhhhhccccchhHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChhHHHHHH
Q psy15185        128 EHATTNNETLIHLLKGSLGTGILAMPNAFVNSGLVIGTVGTILIGILCTYCLHVLVRSQYELCKKKRVPILNYPDSMRVA  207 (611)
Q Consensus       128 ~~~~s~~~a~~~l~~~~iG~GiL~LP~af~~~G~~~giill~~~~~ls~~t~~lL~~~~~~~~~~~~~~~~sy~~l~~~~  207 (611)
                      +++.+.++.+...+.+++|+|++.+|...++.|.. +++..++.++........+.|...+.++     .-..-+..++.
T Consensus         7 ~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p~-----~Gg~y~~~~~~   80 (445)
T 3l1l_A            7 AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDPS-----PGGSYAYARRC   80 (445)
T ss_dssp             CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCCC-----TTTHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCCC-----CCCchhhHHhH
Confidence            35789999999999999999999999988888863 6777777778777777777776654322     22455555666


Q ss_pred             HhcCCchhhhhhhhHHHHHHHHHHHHhhhhhHHHHHHHHhhHHHHHHhhcccchHHHHHHHHHHHHHHhhcccccchhhh
Q psy15185        208 LQQGPPCLRFAANASAIIVDMFLIVYQLGICCVYIMFVATNIKPVTDAYIAVMDVRIVMVLLLLPLIGINSIRNLKLLAP  287 (611)
Q Consensus       208 ~~~G~~~~~~~G~~g~~~v~i~~~~~~~g~~i~Y~i~~~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~l~~~~~l~~l~~  287 (611)
                      +          ||+..++......+.......++....++.+...++...+.+....+.+ ..+.+......+..|....
T Consensus        81 ~----------G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~in~~g~~~~~~  149 (445)
T 3l1l_A           81 F----------GPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCV-VVLWIFVLLNIVGPKMITR  149 (445)
T ss_dssp             S----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSHHHHHHHHH-HHHHHHHHHHHHCHHHHHH
T ss_pred             c----------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccccHHHHHHHH-HHHHHHHHHHHhchHHHHH
Confidence            5          8888888888877777666667777776666544332111121222222 2222233333456666666


Q ss_pred             HHHHHHHHHHHHHHhhhheecccC-CCC--CCCC--CcCCcchhhHHHHHHHHhcccccchhcchhhccCCcc-cCccch
Q psy15185        288 FSQLANVITFIGLGITMYYICQAL-PPV--SSRP--YFGDPRNWNLFIGTTLFALEAVGVVIALENNMKTPAS-FGGYYG  361 (611)
Q Consensus       288 ~s~~~~~~i~~~~~~v~~~~~~~~-~~~--~~~~--~~~~~~~~~~~~g~~~faf~~~~~i~~i~~~mk~p~~-~~~~~~  361 (611)
                      +..+.....+..++.+........ ++.  +...  ...++.++...+....|+|.+...+....+|+|||+| .+|   
T Consensus       150 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~---  226 (445)
T 3l1l_A          150 VQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPI---  226 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccH---
Confidence            655554444333332222222111 111  0110  1112456778888899999999999999999999954 555   


Q ss_pred             hhhhHHHHHHHHHHHHHhHhhhhcCcc
Q psy15185        362 VLNQGMFAIVIMYVIMGFLGYVKYGSA  388 (611)
Q Consensus       362 v~~~a~~i~~~~Y~~~g~~GY~~fG~~  388 (611)
                      .+..+..++.++|....+......+.+
T Consensus       227 a~~~~~~~~~~~y~~~~~~~~~~~~~~  253 (445)
T 3l1l_A          227 ATIGGVLIAAVCYVLSTTAIMGMIPNA  253 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence            899999999999999998877776643
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A Back     alignment and structure
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus} Back     alignment and structure
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00