Psyllid ID: psy15313

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130----
Protein Sequence
MKSTLLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEEEEccccccccccccccccccccEEEcccccccccEEccccccHHHHHHHHcccHHHHHHHHccccEEEEEEccccccccccEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEEEccccccccccccccccccHHHHHcccccccEEEEEccccccHHHHHHHHcccHHHHHHHHHccccEEEEEccccccccccEEEEEEEcccccc
Coil and Loop (DISEMBL)
MKSTLLLLTISFILAafgpvlssaqcspesLVFYRLTVYTfwsqqafpkhfpdtrpvaqwtklygishtenltlfqvgrLADKSLQTFAElgktedfestlnHSQVlstfyappirkgvgltsssffvnaeysk
Flexible Loop (DISEMBL)
MKSTLLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFyappirkgvgltsssffvnaeysk
Low Complexity Region (SEG)
MKstlllltisfilaafGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK
Disordered region (IsUnstruct)
****LLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFV******
Disordered Region (DISOPRED)
**STLLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFE******QVLSTFYAPPIRKGVGLTSSSF*VNA****
Disordered Region (DISEMBL)
MKSTLLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK
Disordered Region (DISPRO)
MKSTLLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNA****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKSTLLLLTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	134	2.2.26 [Sep-21-2011]
Q8BMS2	330	Spondin-2 OS=Mus musculus	yes	N/A	0.910	0.369	0.325	3e-12
Q9WV75	330	Spondin-2 OS=Rattus norve	yes	N/A	0.910	0.369	0.318	5e-12
Q9BUD6	331	Spondin-2 OS=Homo sapiens	yes	N/A	0.858	0.347	0.325	3e-11
Q9W770	802	Spondin-1 OS=Gallus gallu	no	N/A	0.664	0.110	0.322	2e-07
P35446	807	Spondin-1 OS=Rattus norve	no	N/A	0.664	0.110	0.312	3e-07
Q8VCC9	807	Spondin-1 OS=Mus musculus	no	N/A	0.664	0.110	0.312	3e-07
Q9HCB6	807	Spondin-1 OS=Homo sapiens	no	N/A	0.664	0.110	0.312	3e-07
Q9GLX9	807	Spondin-1 OS=Bos taurus G	no	N/A	0.664	0.110	0.312	3e-07
P35447	803	Spondin-1 OS=Xenopus laev	N/A	N/A	0.567	0.094	0.333	2e-05

>sp|Q8BMS2|SPON2_MOUSE Spondin-2 OS=Mus musculus GN=Spon2 PE=1 SV=2

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 12  FILAAFG-----PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGI 66
           F+LA  G     P+   + C+   L  Y +T    WSQ AFPK +P  RP AQW+ L G 
Sbjct: 15  FLLAMIGSTTSQPLGGESVCTARPLARYSITFIGKWSQTAFPKQYPLFRPPAQWSSLLGA 74

Query: 67  SHTENLTLFQVGRLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGL 121
           +H+ + ++++        L+ FAE G+     ++ E+     Q V + F AP I  G G 
Sbjct: 75  AHSSDYSMWRKNEYVSNGLRDFAERGEAWALMKEIEAAGEKLQSVHAVFSAPAIPSGTGQ 134

Query: 122 TSSSFFVNAEYS 133
           TS+   V+  +S
Sbjct: 135 TSTELEVHPRHS 146

Cell adhesion protein that promotes adhesion and outgrowth of hippocampal embryonic neurons. Binds directly to bacteria and their components and functions as an opsonin for macrophage phagocytosis of bacteria. Binds bacterial lipopolysaccharide. Essential in the initiation of the innate immune response and represents a unique pattern-recognition molecule in the ECM for microbial pathogens.
Mus musculus (taxid: 10090)

>sp|Q9WV75|SPON2_RAT Spondin-2 OS=Rattus norvegicus GN=Spon2 PE=1 SV=1

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 12  FILAAFG-----PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGI 66
           F+LA  G     P+   + C+   L  Y +T    WSQ AFPK +P  RP AQW+ L G 
Sbjct: 15  FLLAMLGSTAGQPLGGESVCTARPLARYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGA 74

Query: 67  SHTENLTLFQVGRLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGL 121
           +H+ + ++++        L+ FAE G+     ++ E+     Q V + F AP +  G G 
Sbjct: 75  AHSSDYSMWRKNEYVSNGLRDFAERGEAWALMKEIEAAGEKLQSVHAVFSAPAVPSGTGQ 134

Query: 122 TSSSFFVNAEYS 133
           TS+   V+  +S
Sbjct: 135 TSAELEVHPRHS 146

Cell adhesion protein that promotes adhesion and outgrowth of hippocampal embryonic neurons. Binds directly to bacteria and their components and functions as an opsonin for macrophage phagocytosis of bacteria. Essential in the initiation of the innate immune response and represents a unique pattern-recognition molecule in the ECM for microbial pathogens.

Rattus norvegicus (taxid: 10116)

>sp|Q9BUD6|SPON2_HUMAN Spondin-2 OS=Homo sapiens GN=SPON2 PE=1 SV=3

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+   + CS  +L  Y +T    WSQ AFPK +P  RP AQW+ L G +H+ + ++++  
Sbjct: 28  PLGGESICSARALAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKN 87

Query: 79  RLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
           +     L+ FAE G+     ++ E+     Q V   F AP +  G G TS+   V   +S
Sbjct: 88  QYVSNGLRDFAERGEAWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHS 147

Cell adhesion protein that promotes adhesion and outgrowth of hippocampal embryonic neurons. Binds directly to bacteria and their components and functions as an opsonin for macrophage phagocytosis of bacteria. Essential in the initiation of the innate immune response and represents a unique pattern-recognition molecule in the ECM for microbial pathogens (By similarity). Binds bacterial lipopolysaccharide (LPS).

Homo sapiens (taxid: 9606)

>sp|Q9W770|SPON1_CHICK Spondin-1 OS=Gallus gallus GN=SPON1 PE=2 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P L    C       YRLT Y  WS++  PK FP  R    W+ + G SH++N  L++ G
Sbjct: 190 PTLDCCACGTAK---YRLTFYGNWSEKTHPKDFP--RRTNHWSAIIGSSHSKNYILWEYG 244

Query: 79  RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
             A + ++  AELG     E  +     +VL+   A
Sbjct: 245 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 280

Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Somite-derived spondin 1 is an inhibitory signal involved in patterning the segmental migration of neural crest cells and their topographical segregation within the rostral somites in vitro. May be required to prevent the lateral drifting of the commissural axons after having crossed the floor plate.

Gallus gallus (taxid: 9031)

>sp|P35446|SPON1_RAT Spondin-1 OS=Rattus norvegicus GN=Spon1 PE=1 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct: 195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query: 79  RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
             A + ++  AELG     E  +     +VL+   A
Sbjct: 250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS.

Rattus norvegicus (taxid: 10116)

>sp|Q8VCC9|SPON1_MOUSE Spondin-1 OS=Mus musculus GN=Spon1 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct: 195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query: 79  RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
             A + ++  AELG     E  +     +VL+   A
Sbjct: 250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS.

Mus musculus (taxid: 10090)

>sp|Q9HCB6|SPON1_HUMAN Spondin-1 OS=Homo sapiens GN=SPON1 PE=1 SV=2

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct: 195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query: 79  RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
             A + ++  AELG     E  +     +VL+   A
Sbjct: 250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Major factor for vascular smooth muscle cell.

Homo sapiens (taxid: 9606)

>sp|Q9GLX9|SPON1_BOVIN Spondin-1 OS=Bos taurus GN=SPON1 PE=1 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct: 195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query: 79  RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
             A + ++  AELG     E  +     +VL+   A
Sbjct: 250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Major factor for vascular smooth muscle cell.

Bos taurus (taxid: 9913)

>sp|P35447|SPON1_XENLA Spondin-1 OS=Xenopus laevis GN=spon1 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 34  YRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGK 93
           YRLT Y  WS++A PK +P  R    W+ + G SH+    L++ G+ +D  ++  AELG 
Sbjct: 203 YRLTFYGNWSEKAHPKDYP--RRANHWSAIIGGSHSGEYVLWEYGQASD-GVKQVAELGS 259

Query: 94  TEDFESTLNHS--QVLSTFYA 112
               E  +     +VL+   A
Sbjct: 260 PVKMEEEIRQKGDEVLTVIKA 280

Promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
91078104	446	PREDICTED: similar to GA10108-PA [Tribol	0.813	0.244	0.409	1e-21
321463987	413	hypothetical protein DAPPUDRAFT_323705 [	0.813	0.263	0.4	8e-19
289739449	273	spondin [Glossina morsitans morsitans]	0.813	0.399	0.356	3e-17
357605478	397	hypothetical protein KGM_01680 [Danaus p	0.753	0.254	0.365	3e-17
195381019	601	GJ21488 [Drosophila virilis] gi|19414405	0.805	0.179	0.315	8e-15
321463594	293	hypothetical protein DAPPUDRAFT_56940 [D	0.768	0.351	0.336	6e-14
195124591	593	GI18408 [Drosophila mojavensis] gi|19391	0.559	0.126	0.426	1e-13
241647938	146	f-spondin, putative [Ixodes scapularis]	0.776	0.712	0.349	2e-13
195486060	597	GE12296 [Drosophila yakuba] gi|194177444	0.597	0.134	0.387	3e-13
195056215	600	GH22917 [Drosophila grimshawi] gi|193899	0.552	0.123	0.418	4e-13

>gi|91078104|ref|XP_972867.1| PREDICTED: similar to GA10108-PA [Tribolium castaneum]

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 1/110 (0%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C P+ L  Y++ ++TFWS+  FPKH+PD RP AQW+K++G SH ++ TLF++G+ +   +
Sbjct: 30  CQPDKLTVYKVVLHTFWSRDKFPKHYPDWRPPAQWSKVFGRSHNKSFTLFRLGQKSSPGV 89

Query: 86  QTFAELGKTEDF-ESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK 134
           + FAE G+++   E +     +   F APPI  GVG T + FFV+  +S+
Sbjct: 90  KAFAETGRSDVLEEQSQGEGGIYDEFNAPPITSGVGRTEAEFFVDGNHSR 139

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463987|gb|EFX74998.1| hypothetical protein DAPPUDRAFT_323705 [Daphnia pulex]

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C P+ L  YR+T+ TFW+ + FPKH+P  RP AQW+KL G SH ++ TL+++ + A + L
Sbjct: 9   CQPDRLTVYRVTLNTFWNPRNFPKHYPQWRPPAQWSKLVGRSHNKSYTLYRLHQKATEGL 68

Query: 86  QTFAELGKTEDFES-TLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK 134
           + FAE G+++  ++ +     +   F APPI  G G T + FFV+  +S+
Sbjct: 69  KLFAENGRSDYLDTQSQGEGGIYDEFNAPPITSGEGKTEAEFFVDGNHSR 118

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289739449|gb|ADD18472.1| spondin [Glossina morsitans morsitans]

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 20/129 (15%)

Query: 25  QCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKS 84
            C  + L  Y++ + T+W+++ FPKH+PD RP AQWTK  G SH  +  L+++GRLA  +
Sbjct: 116 NCGLDGLAVYKVVLQTYWTRELFPKHYPDWRPTAQWTKTVGRSHDSSYILYRLGRLASAA 175

Query: 85  LQTFAELGKTEDFESTLNHSQ--------------------VLSTFYAPPIRKGVGLTSS 124
           ++ FAE GKT+ F+S+    Q                    V   F  P I  G G + S
Sbjct: 176 VKQFAETGKTDIFDSSSGDQQQQLKKSMPSQNIVANKSSFSVFDEFNLPAIITGAGRSES 235

Query: 125 SFFVNAEYS 133
            FFV++ +S
Sbjct: 236 KFFVDSNHS 244

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357605478|gb|EHJ64643.1| hypothetical protein KGM_01680 [Danaus plexippus]

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 66/104 (63%), Gaps = 3/104 (2%)

Query: 31  LVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAE 90
           +  YR+ ++T+W+++ FPKH+PD RP AQW+K+YG+SH+ +  LF++GR    S++ FAE
Sbjct: 1   MTVYRMVLHTYWTREKFPKHYPDWRPPAQWSKVYGVSHSRSYVLFRLGRRVSPSVRQFAE 60

Query: 91  LGKTEDFESTLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK 134
            G+++   +       L  F    I +G+G   + FFV+  +S+
Sbjct: 61  SGRSDTLGAAPG---TLDVFGGAAIGQGLGRAEADFFVDGNHSR 101

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195381019|ref|XP_002049253.1| GJ21488 [Drosophila virilis] gi|194144050|gb|EDW60446.1| GJ21488 [Drosophila virilis]

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 25/133 (18%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C+ + L  Y++ ++T+W+++ FPKH+PD RP AQWTK  G +H  N  L+ +G+ A   +
Sbjct: 140 CTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYGLYHIGQPATAGV 199

Query: 86  QTFAELGKTEDFES-------------------------TLNHSQVLSTFYAPPIRKGVG 120
           + FAE GKTE  +S                         T+    V   F  P I+ G G
Sbjct: 200 KQFAETGKTELLDSNAGEQQQQQMQAQKSSTATVAGTAPTMAERSVFDEFSLPAIQLGAG 259

Query: 121 LTSSSFFVNAEYS 133
            + +  FV++ +S
Sbjct: 260 RSEAKVFVDSNHS 272

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463594|gb|EFX74609.1| hypothetical protein DAPPUDRAFT_56940 [Daphnia pulex]

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 64/104 (61%), Gaps = 1/104 (0%)

Query: 32  VFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAEL 91
           + Y++T+ T WS+  FPK +P+ RP AQW+K+ G SH  + TLF++ + + +  + F E 
Sbjct: 1   MVYKVTLATHWSRTLFPKQYPEWRPPAQWSKVIGRSHDSSYTLFRISQASTEGFKEFTET 60

Query: 92  GKTEDFES-TLNHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK 134
           G+++  ++ +     +   F APP+  G G T + FFV++ +S+
Sbjct: 61  GRSDTLDAQSQGEGGIFDEFNAPPVTAGEGKTEAEFFVDSNHSR 104

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195124591|ref|XP_002006775.1| GI18408 [Drosophila mojavensis] gi|193911843|gb|EDW10710.1| GI18408 [Drosophila mojavensis]

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 50/75 (66%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C+ + L  Y++ ++T+W+++ FPKH+PD RP AQWTK  G +H  N  L+ +G+ A   +
Sbjct: 125 CTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYALYHIGQPATGGV 184

Query: 86  QTFAELGKTEDFEST 100
           + FAE GKTE  +S 
Sbjct: 185 KQFAETGKTELLDSN 199

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241647938|ref|XP_002409998.1| f-spondin, putative [Ixodes scapularis] gi|215501490|gb|EEC10984.1| f-spondin, putative [Ixodes scapularis]

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 2/106 (1%)

Query: 31  LVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAE 90
           L  Y+ T+ T W+   FPK +P  RP AQW++L G+SH  ++ L+Q+G +A + ++ FAE
Sbjct: 41  LAVYQATLVTAWTPGRFPKQYPHWRPPAQWSQLVGLSHNSSVRLWQLGHMATEGVRQFAE 100

Query: 91  LGKTEDFESTL--NHSQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK 134
            G+       +      VL  F+AP + KG G + ++FFV+  + +
Sbjct: 101 SGRVGRLTGRMVQGDRGVLDFFHAPAVPKGSGTSQATFFVDPRHRR 146

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195486060|ref|XP_002091343.1| GE12296 [Drosophila yakuba] gi|194177444|gb|EDW91055.1| GE12296 [Drosophila yakuba]

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 52/80 (65%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C+ + L  Y++ ++T+W+++ FPKH+PD RP AQWTK  G +H  N  L+ +G+ A  ++
Sbjct: 118 CTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYALYHIGQPATAAV 177

Query: 86  QTFAELGKTEDFESTLNHSQ 105
           + FAE G+T+  +S     Q
Sbjct: 178 KQFAESGRTDLLDSNAGEQQ 197

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195056215|ref|XP_001995007.1| GH22917 [Drosophila grimshawi] gi|193899213|gb|EDV98079.1| GH22917 [Drosophila grimshawi]

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 50/74 (67%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C+ + L  Y++ ++T+W+++ FPKH+PD RP AQWTK  G +H  N  L+ +G+ A   +
Sbjct: 133 CTLDRLAVYKVILHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYALYHIGQPATAGV 192

Query: 86  QTFAELGKTEDFES 99
           + FAE GKT+  +S
Sbjct: 193 KQFAETGKTDLLDS 206

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	134
FB|FBgn0020269	601	mspo "M-spondin" [Drosophila m	0.597	0.133	0.387	1.2e-16
ZFIN|ZDB-GENE-990415-161	331	spon2b "spondin 2b, extracellu	0.858	0.347	0.341	2.1e-12
MGI|MGI:1923724	330	Spon2 "spondin 2, extracellula	0.858	0.348	0.325	5.9e-12
UNIPROTKB|Q9BUD6	331	SPON2 "Spondin-2" [Homo sapien	0.858	0.347	0.325	6e-12
RGD|708584	330	Spon2 "spondin 2, extracellula	0.858	0.348	0.316	9.9e-12
ZFIN|ZDB-GENE-990415-160	334	spon2a "spondin 2a, extracellu	0.761	0.305	0.342	2.2e-10
UNIPROTKB|Q9W770	802	SPON1 "Spondin-1" [Gallus gall	0.664	0.110	0.322	4.8e-07
UNIPROTKB|Q9GLX9	807	SPON1 "Spondin-1" [Bos taurus	0.664	0.110	0.312	6.3e-07
UNIPROTKB|Q9HCB6	807	SPON1 "Spondin-1" [Homo sapien	0.664	0.110	0.312	6.3e-07
MGI|MGI:2385287	807	Spon1 "spondin 1, (f-spondin)	0.664	0.110	0.312	6.3e-07

FB|FBgn0020269 mspo "M-spondin" [Drosophila melanogaster (taxid:7227)]

 Score = 194 (73.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 31/80 (38%), Positives = 52/80 (65%)

Query:    26 CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
             C+ + L  Y++ ++T+W+++ FPKH+PD RP AQWTK  G +H  N  L+ +G+ A  ++
Sbjct:   114 CTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYALYHIGQPATAAV 173

Query:    86 QTFAELGKTEDFESTLNHSQ 105
             + FAE G+T+  +S     Q
Sbjct:   174 KQFAESGRTDLLDSNAGEQQ 193

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

ZFIN|ZDB-GENE-990415-161 spon2b "spondin 2b, extracellular matrix protein" [Danio rerio (taxid:7955)]

 Score = 170 (64.9 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 41/120 (34%), Positives = 61/120 (50%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             PV     C+  S   YRLT    W+Q AFPKH+P  RP AQW+ L G++H+ +  L+Q  
Sbjct:    27 PVDVDRMCTAPSTAKYRLTFTGQWTQTAFPKHYPLYRPPAQWSPLIGVTHSSDYHLWQRN 86

Query:    79 RLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
               A   ++ F+E  +     ++ E+     Q V   F AP +  G G  ++ F V A +S
Sbjct:    87 EYASNGVREFSERAEAWTLIKEVEAAGERIQSVYGLFSAPAVVAGTGHATTEFEVFARHS 146

GO:0003674 "molecular_function" evidence=ND

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

MGI|MGI:1923724 Spon2 "spondin 2, extracellular matrix protein" [Mus musculus (taxid:10090)]

 Score = 166 (63.5 bits), Expect = 5.9e-12, P = 5.9e-12
 Identities = 39/120 (32%), Positives = 61/120 (50%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P+   + C+   L  Y +T    WSQ AFPK +P  RP AQW+ L G +H+ + ++++  
Sbjct:    27 PLGGESVCTARPLARYSITFIGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKN 86

Query:    79 RLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
                   L+ FAE G+     ++ E+     Q V + F AP I  G G TS+   V+  +S
Sbjct:    87 EYVSNGLRDFAERGEAWALMKEIEAAGEKLQSVHAVFSAPAIPSGTGQTSTELEVHPRHS 146

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0045087 "innate immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q9BUD6 SPON2 "Spondin-2" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 6.0e-12, P = 6.0e-12
 Identities = 39/120 (32%), Positives = 61/120 (50%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P+   + CS  +L  Y +T    WSQ AFPK +P  RP AQW+ L G +H+ + ++++  
Sbjct:    28 PLGGESICSARALAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKN 87

Query:    79 RLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
             +     L+ FAE G+     ++ E+     Q V   F AP +  G G TS+   V   +S
Sbjct:    88 QYVSNGLRDFAERGEAWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHS 147

GO:0007155 "cell adhesion" evidence=IEA

GO:0045087 "innate immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0007411 "axon guidance" evidence=TAS

RGD|708584 Spon2 "spondin 2, extracellular matrix protein" [Rattus norvegicus (taxid:10116)]

 Score = 164 (62.8 bits), Expect = 9.9e-12, P = 9.9e-12
 Identities = 38/120 (31%), Positives = 61/120 (50%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P+   + C+   L  Y +T    WSQ AFPK +P  RP AQW+ L G +H+ + ++++  
Sbjct:    27 PLGGESVCTARPLARYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKN 86

Query:    79 RLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
                   L+ FAE G+     ++ E+     Q V + F AP +  G G TS+   V+  +S
Sbjct:    87 EYVSNGLRDFAERGEAWALMKEIEAAGEKLQSVHAVFSAPAVPSGTGQTSAELEVHPRHS 146

GO:0005102 "receptor binding" evidence=IDA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0007155 "cell adhesion" evidence=IDA

GO:0031012 "extracellular matrix" evidence=TAS

GO:0045087 "innate immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-990415-160 spon2a "spondin 2a, extracellular matrix protein" [Danio rerio (taxid:7955)]

 Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 37/108 (34%), Positives = 55/108 (50%)

Query:    22 SSAQCSPESLVFYRLTVYT-FWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRL 80
             +  +CS      Y + V+T  WS Q FPK +P  RP AQW+KL  ++H E   L+Q G  
Sbjct:    34 NGTECSARGPASY-IVVFTGHWSPQTFPKQYPLFRPPAQWSKLMVVTHNEQYRLWQEGAP 92

Query:    81 ADKSLQTFAELGKT----EDFESTLNHSQVLSTFYAPPIRKGVGLTSS 124
             A   +++FAE G T    +D +       V S +    I  G+G +S+
Sbjct:    93 ASDGMKSFAEQGLTVDLVKDAKEARKRRSVGSMYRTAGIPSGIGHSST 140

GO:0003674 "molecular_function" evidence=ND

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

UNIPROTKB|Q9W770 SPON1 "Spondin-1" [Gallus gallus (taxid:9031)]

 Score = 127 (49.8 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 31/96 (32%), Positives = 45/96 (46%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P L    C       YRLT Y  WS++  PK FP  R    W+ + G SH++N  L++ G
Sbjct:   190 PTLDCCACGTAK---YRLTFYGNWSEKTHPKDFP--RRTNHWSAIIGSSHSKNYILWEYG 244

Query:    79 RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
               A + ++  AELG     E  +     +VL+   A
Sbjct:   245 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 280

GO:0007155 "cell adhesion" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

UNIPROTKB|Q9GLX9 SPON1 "Spondin-1" [Bos taurus (taxid:9913)]

 Score = 126 (49.4 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 30/96 (31%), Positives = 46/96 (47%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct:   195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query:    79 RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
               A + ++  AELG     E  +     +VL+   A
Sbjct:   250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|Q9HCB6 SPON1 "Spondin-1" [Homo sapiens (taxid:9606)]

 Score = 126 (49.4 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 30/96 (31%), Positives = 46/96 (47%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct:   195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query:    79 RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
               A + ++  AELG     E  +     +VL+   A
Sbjct:   250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

GO:0007155 "cell adhesion" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0031012 "extracellular matrix" evidence=ISS;IDA

GO:0005615 "extracellular space" evidence=IDA

MGI|MGI:2385287 Spon1 "spondin 1, (f-spondin) extracellular matrix protein" [Mus musculus (taxid:10090)]

 Score = 126 (49.4 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 30/96 (31%), Positives = 46/96 (47%)

Query:    19 PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
             P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct:   195 PILDCCACGTAK---YRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 249

Query:    79 RLADKSLQTFAELGKTEDFESTLNHS--QVLSTFYA 112
               A + ++  AELG     E  +     +VL+   A
Sbjct:   250 GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 285

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005615 "extracellular space" evidence=ISO

GO:0007155 "cell adhesion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	134
pfam06468	197	pfam06468, Spond_N, Spondin_N	5e-21

>gnl|CDD|219042 pfam06468, Spond_N, Spondin_N

 Score = 83.2 bits (206), Expect = 5e-21
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 34  YRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGK 93
           Y LT    WS++  PK +P  RP   W+K+ G +H+ +  L++ G  A + ++ FAE G 
Sbjct: 4   YELTFEGKWSRETHPKDYPLYRPPTHWSKVIGATHSSDYRLWEYGEYASEGVKEFAEHGS 63

Query: 94  TEDFESTLNHSQ-----VLSTFYAPPIRKGVGLTSSSFFVNAEYSK 134
           T+  ES +         V+  F AP    G G TS+ F V++ +  
Sbjct: 64  TDTLESEIEAQGEKIRTVIKAFGAPAYPNGTGATSAEFEVDSRHHL 109

This conserved region is found at the in the N-terminal half of several Spondin proteins. Spondins are involved in patterning axonal growth trajectory through either inhibiting or promoting adhesion of embryonic nerve cells. Length = 197

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	134
PF06468	196	Spond_N: Spondin_N; InterPro: IPR009465 This conse	100.0
KOG3539|consensus	508		100.0
PRK11372	109	lysozyme inhibitor; Provisional	84.38

>PF06468 Spond_N: Spondin_N; InterPro: IPR009465 This conserved region is found in the N-terminal half of several Spondin proteins []

Probab=100.00  E-value=1.8e-37  Score=244.90  Aligned_cols=104  Identities=31%  Similarity=0.481  Sum_probs=78.9

Q ss_pred             ceEEEEEEEeeecCCCCCCCCCCCCCCCcceeeeecccCCcceeeecCCccCHHHHHHHhcCCchhhhc-cc-CCcceee
Q psy15313         31 LVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFES-TL-NHSQVLS  108 (134)
Q Consensus        31 ~A~Y~vtf~g~Ws~~thPk~yP~~~~~~~~S~liGaSH~~~y~lw~~G~~AS~Gvr~~AE~G~~~~Le~-~~-~~~~v~~  108 (134)
                      +|+|+|||+|+||+++||||||.++|++|||+|||++|+++|+||++|+.||+|||+|||+|++..|++ ++ +.+.+++
T Consensus         1 ~A~Y~~~f~g~Ws~~~hpk~yP~~~~~~~fSpligasH~~~~~lf~~G~~AS~gle~lAE~G~~~~L~~e~~~~~~~~~~   80 (196)
T PF06468_consen    1 TATYEVTFEGIWSRNTHPKDYPSNRPPAHFSPLIGASHNSDYTLFEYGEPASEGLERLAEDGDPSGLEAEIGSAGGNVRT   80 (196)
T ss_dssp             EEEEEEEEEEE-STTTS-TT--CTSSCSEEEEEEEEEE-TT--S--TTS---HHHHHHHHH---HHHHHHHHHHHHHCCE
T ss_pred             CceEEEEEEEEECCccCcccccccccccccchhhhhhccCcccccccCCcccHHHHHHHhcCCHHHHHHHHhhcccccce
Confidence            699999999999999999999999999999999999999999999999999999999999999999999 77 4455677


Q ss_pred             EEEcC---CccCCCCcceEEEEEcCCCCC
Q psy15313        109 TFYAP---PIRKGVGLTSSSFFVNAEYSK  134 (134)
Q Consensus       109 ~~~a~---~i~~g~G~t~a~f~Vd~~H~l  134 (134)
                      +|++.   +++.+.|.++++|+||++||+
T Consensus        81 v~~~~~~~~~~~~~~~t~~~f~vd~~~~~  109 (196)
T PF06468_consen   81 VIKAFGAPGPPPGTGSTSATFTVDRNHHL  109 (196)
T ss_dssp             EEEEEEC--BTTTCEEEEEEEEEETTC-E
T ss_pred             eEeccCcccCCCCCCceeEEEEEcCCCCE
Confidence            77654   466788999999999999985

Spondins are involved in patterning axonal growth trajectory through either inhibiting or promoting adhesion of embryonic nerve cells [].; PDB: 3D34_A 3Q13_A.

>KOG3539|consensus

Probab=100.00  E-value=8.3e-38  Score=271.14  Aligned_cols=127  Identities=29%  Similarity=0.441  Sum_probs=113.4

Q ss_pred             HHHHHHHHhhCCCCCCCCCCCCcceEEEEEEEeeecCCCCCCCCCCCCCCCcceeeeecccCCcceeeecCCccCHHHHH
Q psy15313          8 LTISFILAAFGPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQT   87 (134)
Q Consensus         8 ~~~~~~~~~~~p~~~d~~C~a~~~A~Y~vtf~g~Ws~~thPk~yP~~~~~~~~S~liGaSH~~~y~lw~~G~~AS~Gvr~   87 (134)
                      .++--+.++..|......||||++|+|+++|+|+||+++||||||.+||.+|||++||++|++||.||++|++||+|+|+
T Consensus       106 ~l~~~~~~a~~p~~~~~~C~a~~~AkY~~~f~g~WS~~t~PK~yP~~r~~t~~s~~lGasH~snys~w~~g~~at~G~rd  185 (508)
T KOG3539|consen  106 DLCETKVAAIAPQEKPQTCCACDPAKYSLVFTGKWSRETHPKDYPGKRPRTRFSDALGASHSSNYSLWDIGQIATAGLRD  185 (508)
T ss_pred             hhhhhhhhccCCCCCCCccccCChhheEEEEeeeecccCCccccCccchHHHHHHHhhhhcCCCcchhhcCcccchhhhh
Confidence            44456777777877766799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCchhhhc-cc-CCcceeeEEEc---CCccCCCCcceEEEEEcCCCCC
Q psy15313         88 FAELGKTEDFES-TL-NHSQVLSTFYA---PPIRKGVGLTSSSFFVNAEYSK  134 (134)
Q Consensus        88 ~AE~G~~~~Le~-~~-~~~~v~~~~~a---~~i~~g~G~t~a~f~Vd~~H~l  134 (134)
                      |||+|++..||. ++ ....++++|++   +.|++++|.|++.|+||++||+
T Consensus       186 ~AE~G~t~~le~e~~a~~s~~rsv~~~~~~~yvP~~~g~tsa~~~Vd~~H~l  237 (508)
T KOG3539|consen  186 FAESGSTMALESELKAPGSALRSVIKVFGLPYVPNVTGDTSAKFRVDSNHSL  237 (508)
T ss_pred             hhhcCcHHHHHHHHhCcchhhhHHHHhhcCccccCCCCCcceEEEecCCcce
Confidence            999999999999 87 45555666554   5556899999999999999996

>PRK11372 lysozyme inhibitor; Provisional

Probab=84.38  E-value=1.6  Score=31.64  Aligned_cols=14  Identities=14%  Similarity=0.154  Sum_probs=11.0

Q ss_pred             CCcceeeecCCccC
Q psy15313         69 TENLTLFQVGRLAD   82 (134)
Q Consensus        69 ~~~y~lw~~G~~AS   82 (134)
                      +..|.+|..|+-|+
T Consensus        77 ~g~~~fWtKG~eA~   90 (109)
T PRK11372         77 DGIYVFWSKGDEAT   90 (109)
T ss_pred             CCcEEEEEeCCeEE
Confidence            35799999997764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	134
3d34_A	223	Structure Of The F-Spondin Domain Of Mindin Length		2e-11
3q13_A	258	The Structure Of The Ca2+-Binding, Glycosylated F-S		2e-08

>pdb|3D34|A Chain A, Structure Of The F-Spondin Domain Of Mindin Length = 223

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+   + CS  +   Y +T    WSQ AFPK +P  RP AQW+ L G +H+ + ++++  
Sbjct: 2   PLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKN 61
Query: 79  RLADKSLQTFAELGKT----EDFESTLNHSQ-VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
           +     L+ FAE G+     ++ E+     Q V   F AP +  G G TS+   V   +S
Sbjct: 62  QYVSNGLRDFAERGEAWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHS 121

>pdb|3Q13|A Chain A, The Structure Of The Ca2+-Binding, Glycosylated F-Spondin Domain Of F- Spondin, A C2-Domain Variant From Extracellular Matrix Length = 258

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+L    C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G
Sbjct: 11  PILDCCACG---TAKYRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYG 65
Query: 79  RLADKSLQTFAELGKTEDFESTLNH--SQVLSTFYA 112
             A + ++  AELG     E  +     +VL+   A
Sbjct: 66  GYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKA 101
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	134
3d34_A	223	Spondin-2; cell adhesion, extracellular matrix, im	1e-21
3q13_A	258	Spondin-1; FS-domain, membrane targeting, AXON gui	9e-19

>3d34_A Spondin-2; cell adhesion, extracellular matrix, immune response, polymorphism, secreted, immune system; 1.80A {Homo sapiens} Length = 223

 Score = 85.2 bits (210), Expect = 1e-21
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)

Query: 19  PVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVG 78
           P+   + CS  +   Y +T    WSQ AFPK +P  RP AQW+ L G +H+ + ++++  
Sbjct: 2   PLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKN 61

Query: 79  RLADKSLQTFAELGKTEDFESTLNHSQ-----VLSTFYAPPIRKGVGLTSSSFFVNAEYS 133
           +     L+ FAE G+       +  +      V   F AP +  G G TS+   V   +S
Sbjct: 62  QYVSNGLRDFAERGEAWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHS 121

>3q13_A Spondin-1; FS-domain, membrane targeting, AXON guidance, C2- derivative, glycosylated, extracellular matrix, cell adhesi; HET: NAG BMA; 1.95A {Homo sapiens} Length = 258

 Score = 78.3 bits (192), Expect = 9e-19
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 26  CSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSL 85
           C       YRLT Y  WS++  PK +P  R    W+ + G SH++N  L++ G  A + +
Sbjct: 15  CCACGTAKYRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYGGYASEGV 72

Query: 86  QTFAELGKTEDFESTL-NHSQVLST-------FYAPPIRKGVGLTSSSFFVNAEYS 133
           +  AELG     E  +   S  + T       + A          S+ F V+    
Sbjct: 73  KQVAELGSPVKMEEEIRQQSDEVLTVIKAKAQWPAWQPLNVRAAPSAEFSVDRTRH 128

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	134
3d34_A	223	Spondin-2; cell adhesion, extracellular matrix, im	100.0
3q13_A	258	Spondin-1; FS-domain, membrane targeting, AXON gui	100.0

>3d34_A Spondin-2; cell adhesion, extracellular matrix, immune response, polymorphism, secreted, immune system; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.2e-44  Score=284.86  Aligned_cols=117  Identities=31%  Similarity=0.525  Sum_probs=105.5

Q ss_pred             CCCCCCCCCCCCcceEEEEEEEeeecCCCCCCCCCCCCCCCcceeeeecccCCcceeeecCCccCHHHHHHHhcCCchhh
Q psy15313         18 GPVLSSAQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDF   97 (134)
Q Consensus        18 ~p~~~d~~C~a~~~A~Y~vtf~g~Ws~~thPk~yP~~~~~~~~S~liGaSH~~~y~lw~~G~~AS~Gvr~~AE~G~~~~L   97 (134)
                      +|+..|.+||||++|+|+|||+|+||+++||||||.+||++|||++||++|+++|.||++|++||+|||+|||+|+++.|
T Consensus         1 ~~~~~~~~c~a~~~a~Y~vtf~~~ws~~~hpk~yP~~~~~~~~Spli~a~H~~~~~lf~~G~~AS~gLe~lAE~G~~~~L   80 (223)
T 3d34_A            1 QPLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKNQYVSNGLRDFAERGEAWAL   80 (223)
T ss_dssp             -------CCCCSSCEEEEEEEEECCCTTTCCTTCCCSSSCSEEEEEEEEEECTTCCSCCTTSCCCHHHHHHHHHCCCHHH
T ss_pred             CCCCCCCCccCCCceEEEEEEEEeecCccCCccCccccCCCCccccEEEEecCCCcccccCCcccHHHHHHhccCCHHHH
Confidence            47778889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hc-ccCC----cceeeEEEcCCccCCCCcceEEEEEcCCCCC
Q psy15313         98 ES-TLNH----SQVLSTFYAPPIRKGVGLTSSSFFVNAEYSK  134 (134)
Q Consensus        98 e~-~~~~----~~v~~~~~a~~i~~g~G~t~a~f~Vd~~H~l  134 (134)
                      ++ ++.+    +.|+++|+++|++.+.|+++++|+||++||+
T Consensus        81 ~~e~~~~~~~~~~v~~~~~a~g~~~~pG~t~~~f~vd~~~~~  122 (223)
T 3d34_A           81 MKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSL  122 (223)
T ss_dssp             HHHHHHHHHHHSCEEEEEEECCBSSTTCEEEEEEEEBTTBCE
T ss_pred             HHHHHhhccccceeeeeeccCCccCCCCcceEEEEECCCCcE
Confidence            99 8743    6699999999999889999999999999874

>3q13_A Spondin-1; FS-domain, membrane targeting, AXON guidance, C2- derivative, glycosylated, extracellular matrix, cell adhesi; HET: NAG BMA; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.1e-42  Score=281.57  Aligned_cols=109  Identities=28%  Similarity=0.498  Sum_probs=100.4

Q ss_pred             CCCCCCcceEEEEEEEeeecCCCCCCCCCCCCCCCcceeeeecccCCcceeeecCCccCHHHHHHHhcCCchhhhc-cc-
Q psy15313         24 AQCSPESLVFYRLTVYTFWSQQAFPKHFPDTRPVAQWTKLYGISHTENLTLFQVGRLADKSLQTFAELGKTEDFES-TL-  101 (134)
Q Consensus        24 ~~C~a~~~A~Y~vtf~g~Ws~~thPk~yP~~~~~~~~S~liGaSH~~~y~lw~~G~~AS~Gvr~~AE~G~~~~Le~-~~-  101 (134)
                      .+||||++|+|+|+|+|+|||++||||||  ++++|||+|||++|+++|+||++|++||+|||+|||+|+++.|++ ++ 
T Consensus        13 ~~CcAc~~A~Y~vtF~g~Ws~~~hPk~yP--~~~~~fSpligasHs~~y~lw~~G~~AS~gl~~~AE~G~~~~L~~ei~~   90 (258)
T 3q13_A           13 LDCCACGTAKYRLTFYGNWSEKTHPKDYP--RRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSPVKMEEEIRQ   90 (258)
T ss_dssp             CSCCCCSEEEEEEEEEECCSTTTSCTTCC--TTTCEECCEEEEEECTTCCSCCTTSCCCHHHHHHHHHCCCHHHHHHHHT
T ss_pred             ccccCCCcceEEEEEEEEECCccCcccCC--CCcccccchhhhhcCCCCcceeCCCcccHHHHHHhccCCHHHHHHHHHh
Confidence            46999999999999999999999999999  468999999999999999999999999999999999999999999 87 


Q ss_pred             CCcceeeEEEcCCcc------CCCCcceEEEEEcCCCCC
Q psy15313        102 NHSQVLSTFYAPPIR------KGVGLTSSSFFVNAEYSK  134 (134)
Q Consensus       102 ~~~~v~~~~~a~~i~------~g~G~t~a~f~Vd~~H~l  134 (134)
                      +++.|+++|+++|++      ++.|+++++|+||+.||+
T Consensus        91 ~g~~v~tvi~a~Gl~p~~~P~~~~~~~s~~f~vd~~h~l  129 (258)
T 3q13_A           91 QSDEVLTVIKAKAQWPAWQPLNVRAAPSAEFSVDRTRHL  129 (258)
T ss_dssp             TGGGEEEEEEECCBSSSCCCTTTSCCCEEEEEEC-CCCE
T ss_pred             cCccceeeeecccccccccCCCCCCcceEEEEEcCCCce
Confidence            556799999999975      456788999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00